EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000003372 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|FBP|Fubp|Fubp4
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 19670 bases
Position: chrJH000043.1:1911188-1930857
Accession: 100761415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000004586	KH_1	PF00013.29	1.1e-69	1	4
ENSCGRP00000004586	KH_1	PF00013.29	1.1e-69	2	4
ENSCGRP00000004586	KH_1	PF00013.29	1.1e-69	3	4
ENSCGRP00000004586	KH_1	PF00013.29	1.1e-69	4	4
ENSCGRP00000004587	KH_1	PF00013.29	1.2e-69	1	4
ENSCGRP00000004587	KH_1	PF00013.29	1.2e-69	2	4
ENSCGRP00000004587	KH_1	PF00013.29	1.2e-69	3	4
ENSCGRP00000004587	KH_1	PF00013.29	1.2e-69	4	4
ENSCGRP00000004588	KH_1	PF00013.29	6.6e-17	1	1
ENSCGRP00000004586	KH_2	PF07650.17	1.2e-22	1	2
ENSCGRP00000004586	KH_2	PF07650.17	1.2e-22	2	2
ENSCGRP00000004587	KH_2	PF07650.17	1.3e-22	1	2
ENSCGRP00000004587	KH_2	PF07650.17	1.3e-22	2	2
ENSCGRP00000004588	KH_2	PF07650.17	1.8e-06	1	1
ENSCGRP00000004586	DUF1897	PF09005.10	8.7e-12	1	2
ENSCGRP00000004586	DUF1897	PF09005.10	8.7e-12	2	2
ENSCGRP00000004587	DUF1897	PF09005.10	9.3e-12	1	2
ENSCGRP00000004587	DUF1897	PF09005.10	9.3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000004671	-	1824	-	ENSCGRP00000004586	607 (aa)	-	-
ENSCGRT00000004673	-	450	-	ENSCGRP00000004588	149 (aa)	-	-
ENSCGRT00000004672	-	1857	XM_016979383	ENSCGRP00000004587	618 (aa)	XP_016834872	-

Gene Model

Click here to download ENSCGRG00000003372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000003372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000003372	Fubp1	62	33.645	ENSCGRG00000001837	Pcbp3	66	32.743
ENSCGRG00000003372	Fubp1	93	60.269	ENSCGRG00000015331	Khsrp	58	67.254
ENSCGRG00000003372	Fubp1	62	34.524	ENSCGRG00000008617	Pcbp4	77	34.524
ENSCGRG00000003372	Fubp1	98	53.642	ENSCGRG00000001872	Fubp3	81	65.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000003372	Fubp1	100	98.867	ENSG00000162613	FUBP1	94	98.867	Homo_sapiens
ENSCGRG00000003372	Fubp1	99	70.310	ENSAPOG00000014845	fubp1	65	76.905	Acanthochromis_polyacanthus
ENSCGRG00000003372	Fubp1	98	100.000	ENSAMEG00000007372	FUBP1	94	95.397	Ailuropoda_melanoleuca
ENSCGRG00000003372	Fubp1	100	69.431	ENSACIG00000020024	fubp1	64	75.000	Amphilophus_citrinellus
ENSCGRG00000003372	Fubp1	98	70.270	ENSAPEG00000012232	fubp1	67	78.230	Amphiprion_percula
ENSCGRG00000003372	Fubp1	99	71.993	ENSATEG00000018619	fubp1	65	79.469	Anabas_testudineus
ENSCGRG00000003372	Fubp1	99	96.700	ENSAPLG00000005965	FUBP1	100	96.700	Anas_platyrhynchos
ENSCGRG00000003372	Fubp1	99	86.553	ENSACAG00000006310	FUBP1	91	87.017	Anolis_carolinensis
ENSCGRG00000003372	Fubp1	99	71.545	ENSACLG00000006708	fubp1	66	79.469	Astatotilapia_calliptera
ENSCGRG00000003372	Fubp1	100	77.333	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSCGRG00000003372	Fubp1	100	98.847	ENSCJAG00000007062	FUBP1	94	98.847	Callithrix_jacchus
ENSCGRG00000003372	Fubp1	100	99.012	ENSCAFG00000020361	FUBP1	94	99.012	Canis_familiaris
ENSCGRG00000003372	Fubp1	100	98.382	ENSTSYG00000000148	FUBP1	100	98.382	Carlito_syrichta
ENSCGRG00000003372	Fubp1	61	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSCGRG00000003372	Fubp1	100	99.191	ENSCPOG00000002757	FUBP1	100	98.658	Cavia_porcellus
ENSCGRG00000003372	Fubp1	98	98.496	ENSCCAG00000036537	FUBP1	93	82.353	Cebus_capucinus
ENSCGRG00000003372	Fubp1	100	98.847	ENSCATG00000042126	FUBP1	94	98.847	Cercocebus_atys
ENSCGRG00000003372	Fubp1	100	99.029	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSCGRG00000003372	Fubp1	100	98.847	ENSCSAG00000001402	FUBP1	94	98.847	Chlorocebus_sabaeus
ENSCGRG00000003372	Fubp1	100	98.706	ENSCHOG00000008177	FUBP1	94	98.706	Choloepus_hoffmanni
ENSCGRG00000003372	Fubp1	100	100.000	ENSCGRG00001007103	Fubp1	95	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000003372	Fubp1	100	70.847	ENSCSEG00000021412	fubp1	64	78.469	Cynoglossus_semilaevis
ENSCGRG00000003372	Fubp1	99	69.327	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSCGRG00000003372	Fubp1	100	71.141	ENSDARG00000029248	fubp1	66	78.588	Danio_rerio
ENSCGRG00000003372	Fubp1	73	70.370	ENSDNOG00000034565	-	75	71.084	Dasypus_novemcinctus
ENSCGRG00000003372	Fubp1	100	98.544	ENSDORG00000016534	Fubp1	94	98.544	Dipodomys_ordii
ENSCGRG00000003372	Fubp1	75	99.023	ENSETEG00000000948	-	56	99.023	Echinops_telfairi
ENSCGRG00000003372	Fubp1	91	45.862	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSCGRG00000003372	Fubp1	98	100.000	ENSEEUG00000001287	FUBP1	94	84.628	Erinaceus_europaeus
ENSCGRG00000003372	Fubp1	98	77.551	ENSELUG00000007990	fubp1	66	76.123	Esox_lucius
ENSCGRG00000003372	Fubp1	99	96.535	ENSFALG00000005768	FUBP1	92	96.535	Ficedula_albicollis
ENSCGRG00000003372	Fubp1	100	98.706	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSCGRG00000003372	Fubp1	100	71.613	ENSFHEG00000005230	fubp1	65	83.036	Fundulus_heteroclitus
ENSCGRG00000003372	Fubp1	100	66.450	ENSGMOG00000003370	fubp1	65	70.673	Gadus_morhua
ENSCGRG00000003372	Fubp1	100	96.552	ENSGALG00000008939	FUBP1	98	96.552	Gallus_gallus
ENSCGRG00000003372	Fubp1	100	70.206	ENSGAFG00000020972	fubp1	86	79.551	Gambusia_affinis
ENSCGRG00000003372	Fubp1	100	70.665	ENSGACG00000016563	fubp1	65	77.644	Gasterosteus_aculeatus
ENSCGRG00000003372	Fubp1	100	70.063	ENSHBUG00000009835	fubp1	79	78.313	Haplochromis_burtoni
ENSCGRG00000003372	Fubp1	100	99.353	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSCGRG00000003372	Fubp1	84	93.600	ENSHGLG00000002808	-	66	91.546	Heterocephalus_glaber_female
ENSCGRG00000003372	Fubp1	100	99.353	ENSHGLG00100003417	-	94	99.353	Heterocephalus_glaber_male
ENSCGRG00000003372	Fubp1	84	93.600	ENSHGLG00100001414	-	66	92.271	Heterocephalus_glaber_male
ENSCGRG00000003372	Fubp1	100	68.454	ENSHCOG00000000910	fubp1	66	76.334	Hippocampus_comes
ENSCGRG00000003372	Fubp1	98	78.912	ENSIPUG00000009896	fubp1	65	78.673	Ictalurus_punctatus
ENSCGRG00000003372	Fubp1	100	99.515	ENSSTOG00000014312	FUBP1	94	99.515	Ictidomys_tridecemlineatus
ENSCGRG00000003372	Fubp1	100	98.517	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSCGRG00000003372	Fubp1	100	70.569	ENSKMAG00000018897	fubp1	64	77.778	Kryptolebias_marmoratus
ENSCGRG00000003372	Fubp1	98	69.595	ENSLBEG00000012700	fubp1	68	76.322	Labrus_bergylta
ENSCGRG00000003372	Fubp1	94	81.560	ENSLOCG00000003745	fubp1	87	78.082	Lepisosteus_oculatus
ENSCGRG00000003372	Fubp1	98	100.000	ENSLAFG00000003273	FUBP1	100	98.378	Loxodonta_africana
ENSCGRG00000003372	Fubp1	100	98.706	ENSMFAG00000031825	FUBP1	94	98.706	Macaca_fascicularis
ENSCGRG00000003372	Fubp1	100	98.847	ENSMMUG00000002899	FUBP1	94	98.847	Macaca_mulatta
ENSCGRG00000003372	Fubp1	100	98.847	ENSMNEG00000045212	FUBP1	94	98.847	Macaca_nemestrina
ENSCGRG00000003372	Fubp1	100	71.336	ENSMZEG00005024298	fubp1	65	80.144	Maylandia_zebra
ENSCGRG00000003372	Fubp1	100	96.223	ENSMGAG00000009424	FUBP1	100	96.223	Meleagris_gallopavo
ENSCGRG00000003372	Fubp1	100	99.353	ENSMAUG00000016428	Fubp1	100	99.329	Mesocricetus_auratus
ENSCGRG00000003372	Fubp1	100	99.676	ENSMOCG00000014751	Fubp1	100	99.329	Microtus_ochrogaster
ENSCGRG00000003372	Fubp1	94	73.285	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSCGRG00000003372	Fubp1	99	90.240	ENSMODG00000020804	FUBP1	98	90.240	Monodelphis_domestica
ENSCGRG00000003372	Fubp1	100	70.874	ENSMALG00000015173	fubp1	65	78.469	Monopterus_albus
ENSCGRG00000003372	Fubp1	100	100.000	MGP_CAROLIEiJ_G0025740	Fubp1	100	100.000	Mus_caroli
ENSCGRG00000003372	Fubp1	100	99.329	ENSMUSG00000028034	Fubp1	100	99.329	Mus_musculus
ENSCGRG00000003372	Fubp1	100	100.000	MGP_PahariEiJ_G0027191	Fubp1	100	100.000	Mus_pahari
ENSCGRG00000003372	Fubp1	100	100.000	MGP_SPRETEiJ_G0026693	Fubp1	100	100.000	Mus_spretus
ENSCGRG00000003372	Fubp1	98	98.630	ENSMLUG00000014802	FUBP1	94	94.770	Myotis_lucifugus
ENSCGRG00000003372	Fubp1	100	99.329	ENSNGAG00000014302	Fubp1	100	99.329	Nannospalax_galili
ENSCGRG00000003372	Fubp1	100	68.144	ENSNBRG00000015099	fubp1	66	79.469	Neolamprologus_brichardi
ENSCGRG00000003372	Fubp1	98	100.000	ENSNLEG00000009772	FUBP1	94	94.839	Nomascus_leucogenys
ENSCGRG00000003372	Fubp1	96	97.674	ENSMEUG00000007917	-	79	97.674	Notamacropus_eugenii
ENSCGRG00000003372	Fubp1	90	96.644	ENSOPRG00000001175	FUBP1	85	96.644	Ochotona_princeps
ENSCGRG00000003372	Fubp1	98	69.178	ENSODEG00000003657	-	94	66.446	Octodon_degus
ENSCGRG00000003372	Fubp1	100	98.867	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSCGRG00000003372	Fubp1	99	69.969	ENSONIG00000018381	fubp1	65	80.144	Oreochromis_niloticus
ENSCGRG00000003372	Fubp1	98	98.630	ENSOANG00000009777	FUBP1	99	91.954	Ornithorhynchus_anatinus
ENSCGRG00000003372	Fubp1	99	68.152	ENSORLG00000003540	fubp1	66	79.227	Oryzias_latipes
ENSCGRG00000003372	Fubp1	99	69.388	ENSORLG00020005908	fubp1	65	78.502	Oryzias_latipes_hni
ENSCGRG00000003372	Fubp1	99	70.957	ENSORLG00015008779	fubp1	65	78.502	Oryzias_latipes_hsok
ENSCGRG00000003372	Fubp1	100	70.395	ENSOMEG00000021943	fubp1	65	77.295	Oryzias_melastigma
ENSCGRG00000003372	Fubp1	98	100.000	ENSOGAG00000014233	FUBP1	94	95.095	Otolemur_garnettii
ENSCGRG00000003372	Fubp1	100	98.658	ENSOARG00000013259	FUBP1	94	95.375	Ovis_aries
ENSCGRG00000003372	Fubp1	100	99.029	ENSPPRG00000000413	FUBP1	94	99.029	Panthera_pardus
ENSCGRG00000003372	Fubp1	100	99.029	ENSPTIG00000019450	FUBP1	94	99.029	Panthera_tigris_altaica
ENSCGRG00000003372	Fubp1	100	95.888	ENSPSIG00000012965	FUBP1	100	95.973	Pelodiscus_sinensis
ENSCGRG00000003372	Fubp1	99	71.522	ENSPMGG00000009060	fubp1	66	78.095	Periophthalmus_magnuspinnatus
ENSCGRG00000003372	Fubp1	100	99.515	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSCGRG00000003372	Fubp1	57	64.115	ENSPMAG00000001644	-	85	64.115	Petromyzon_marinus
ENSCGRG00000003372	Fubp1	100	68.730	ENSPLAG00000021170	fubp1	67	80.144	Poecilia_latipinna
ENSCGRG00000003372	Fubp1	99	72.533	ENSPMEG00000004747	fubp1	68	80.144	Poecilia_mexicana
ENSCGRG00000003372	Fubp1	99	71.683	ENSPREG00000017911	fubp1	63	84.457	Poecilia_reticulata
ENSCGRG00000003372	Fubp1	70	99.052	ENSPPYG00000001219	-	64	99.052	Pongo_abelii
ENSCGRG00000003372	Fubp1	100	98.706	ENSPCAG00000012617	FUBP1	94	98.706	Procavia_capensis
ENSCGRG00000003372	Fubp1	100	99.029	ENSPCOG00000024974	FUBP1	94	99.029	Propithecus_coquereli
ENSCGRG00000003372	Fubp1	100	94.337	ENSPVAG00000014637	FUBP1	94	94.337	Pteropus_vampyrus
ENSCGRG00000003372	Fubp1	100	71.313	ENSPNYG00000004552	fubp1	68	80.193	Pundamilia_nyererei
ENSCGRG00000003372	Fubp1	98	79.592	ENSPNAG00000016207	fubp1	81	79.097	Pygocentrus_nattereri
ENSCGRG00000003372	Fubp1	100	99.176	ENSRNOG00000043370	Fubp1	94	99.176	Rattus_norvegicus
ENSCGRG00000003372	Fubp1	100	98.847	ENSRBIG00000042950	FUBP1	94	98.847	Rhinopithecus_bieti
ENSCGRG00000003372	Fubp1	100	98.847	ENSRROG00000043534	FUBP1	94	98.847	Rhinopithecus_roxellana
ENSCGRG00000003372	Fubp1	100	99.012	ENSSBOG00000027299	FUBP1	98	99.062	Saimiri_boliviensis_boliviensis
ENSCGRG00000003372	Fubp1	100	97.315	ENSSHAG00000005367	FUBP1	100	98.201	Sarcophilus_harrisii
ENSCGRG00000003372	Fubp1	98	77.551	ENSSFOG00015010213	fubp1	65	80.529	Scleropages_formosus
ENSCGRG00000003372	Fubp1	99	70.064	ENSSDUG00000007383	fubp1	64	77.855	Seriola_dumerili
ENSCGRG00000003372	Fubp1	100	70.159	ENSSLDG00000022863	fubp1	67	78.125	Seriola_lalandi_dorsalis
ENSCGRG00000003372	Fubp1	100	96.234	ENSSARG00000011730	FUBP1	51	100.000	Sorex_araneus
ENSCGRG00000003372	Fubp1	99	88.640	ENSSPUG00000008389	FUBP1	94	85.604	Sphenodon_punctatus
ENSCGRG00000003372	Fubp1	99	72.085	ENSSPAG00000010161	fubp1	64	79.227	Stegastes_partitus
ENSCGRG00000003372	Fubp1	99	95.588	ENSTGUG00000006841	FUBP1	100	95.588	Taeniopygia_guttata
ENSCGRG00000003372	Fubp1	98	69.863	ENSTRUG00000004615	fubp1	60	79.426	Takifugu_rubripes
ENSCGRG00000003372	Fubp1	56	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSCGRG00000003372	Fubp1	87	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSCGRG00000003372	Fubp1	100	98.867	ENSTTRG00000000096	FUBP1	94	98.867	Tursiops_truncatus
ENSCGRG00000003372	Fubp1	100	98.658	ENSVPAG00000004709	FUBP1	94	98.858	Vicugna_pacos
ENSCGRG00000003372	Fubp1	100	68.730	ENSXCOG00000019354	fubp1	67	78.230	Xiphophorus_couchianus
ENSCGRG00000003372	Fubp1	97	72.101	ENSXMAG00000007168	fubp1	64	84.457	Xiphophorus_maculatus