EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000003664 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 36235 bases
Position: chrJH000376.1:740859-777093
Accession: 100760982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000005003	PAP_RNA-bind	PF04926.15	5e-25	1	1
ENSCGRP00000005004	PAP_RNA-bind	PF04926.15	5.1e-25	1	1
ENSCGRP00000005002	PAP_RNA-bind	PF04926.15	5.1e-25	1	1
ENSCGRP00000005005	PAP_RNA-bind	PF04926.15	5.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000005092	-	2226	-	ENSCGRP00000005002	741 (aa)	-	-
ENSCGRT00000005093	-	2271	XM_003503273	ENSCGRP00000005003	736 (aa)	XP_003503321	-
ENSCGRT00000005094	-	2208	XM_007630970	ENSCGRP00000005004	715 (aa)	XP_007629160	-
ENSCGRT00000005095	-	2073	-	ENSCGRP00000005005	690 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000003664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000003664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000003664	-	100	86.344	ENSCGRG00000000257	-	99	86.344
ENSCGRG00000003664	-	98	84.435	ENSCGRG00000001888	-	96	84.022
ENSCGRG00000003664	-	99	60.268	ENSCGRG00000005552	-	99	60.680

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000003664	-	100	95.700	ENSG00000090060	PAPOLA	97	98.913	Homo_sapiens
ENSCGRG00000003664	-	100	96.070	ENSAMEG00000014142	PAPOLA	100	95.816	Ailuropoda_melanoleuca
ENSCGRG00000003664	-	100	90.786	ENSAPLG00000006645	PAPOLA	100	90.553	Anas_platyrhynchos
ENSCGRG00000003664	-	100	92.402	ENSACAG00000013474	PAPOLA	99	95.579	Anolis_carolinensis
ENSCGRG00000003664	-	100	96.957	ENSANAG00000018274	PAPOLA	99	98.529	Aotus_nancymaae
ENSCGRG00000003664	-	77	90.772	ENSANAG00000027941	-	98	90.772	Aotus_nancymaae
ENSCGRG00000003664	-	99	73.654	ENSAMXG00000018141	papola	99	85.225	Astyanax_mexicanus
ENSCGRG00000003664	-	100	97.536	ENSBTAG00000004054	PAPOLA	99	97.536	Bos_taurus
ENSCGRG00000003664	-	100	96.552	ENSCJAG00000006512	PAPOLA	99	98.532	Callithrix_jacchus
ENSCGRG00000003664	-	100	96.467	ENSCAFG00000017783	PAPOLA	99	96.467	Canis_familiaris
ENSCGRG00000003664	-	100	95.816	ENSCAFG00020011550	PAPOLA	100	95.816	Canis_lupus_dingo
ENSCGRG00000003664	-	100	95.816	ENSCHIG00000025004	-	100	95.816	Capra_hircus
ENSCGRG00000003664	-	100	96.667	ENSTSYG00000012384	PAPOLA	99	96.667	Carlito_syrichta
ENSCGRG00000003664	-	100	93.333	ENSCPOG00000002648	PAPOLA	99	93.333	Cavia_porcellus
ENSCGRG00000003664	-	100	95.562	ENSCCAG00000025120	PAPOLA	98	97.967	Cebus_capucinus
ENSCGRG00000003664	-	100	96.695	ENSCATG00000018815	PAPOLA	99	98.883	Cercocebus_atys
ENSCGRG00000003664	-	100	97.246	ENSCLAG00000016342	PAPOLA	99	97.246	Chinchilla_lanigera
ENSCGRG00000003664	-	100	95.553	ENSCSAG00000010516	PAPOLA	100	95.181	Chlorocebus_sabaeus
ENSCGRG00000003664	-	72	81.471	ENSCHOG00000001115	PAPOLA	72	81.471	Choloepus_hoffmanni
ENSCGRG00000003664	-	100	92.673	ENSCPBG00000024125	PAPOLA	100	92.318	Chrysemys_picta_bellii
ENSCGRG00000003664	-	100	90.431	ENSCANG00000000159	PAPOLA	100	90.310	Colobus_angolensis_palliatus
ENSCGRG00000003664	-	99	87.211	ENSCGRG00001002732	-	99	87.211	Cricetulus_griseus_chok1gshd
ENSCGRG00000003664	-	100	91.304	ENSCGRG00001000229	-	100	90.958	Cricetulus_griseus_chok1gshd
ENSCGRG00000003664	-	100	100.000	ENSCGRG00001022693	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000003664	-	90	46.440	ENSCSEG00000001841	-	71	54.054	Cynoglossus_semilaevis
ENSCGRG00000003664	-	100	70.816	ENSDARG00000009585	papola	99	70.816	Danio_rerio
ENSCGRG00000003664	-	65	88.983	ENSDORG00000013415	-	100	90.254	Dipodomys_ordii
ENSCGRG00000003664	-	100	82.768	ENSETEG00000004889	PAPOLA	100	82.768	Echinops_telfairi
ENSCGRG00000003664	-	98	69.824	ENSELUG00000018972	papola	98	69.742	Esox_lucius
ENSCGRG00000003664	-	100	97.826	ENSFCAG00000006784	PAPOLA	99	97.826	Felis_catus
ENSCGRG00000003664	-	100	93.750	ENSFALG00000002547	PAPOLA	98	88.026	Ficedula_albicollis
ENSCGRG00000003664	-	100	95.942	ENSFDAG00000010370	PAPOLA	100	95.942	Fukomys_damarensis
ENSCGRG00000003664	-	73	66.910	ENSGMOG00000010209	papola	100	67.276	Gadus_morhua
ENSCGRG00000003664	-	100	90.217	ENSGALG00000033099	PAPOLA	100	89.879	Gallus_gallus
ENSCGRG00000003664	-	70	54.167	ENSGACG00000006142	-	100	53.750	Gasterosteus_aculeatus
ENSCGRG00000003664	-	93	95.194	ENSGAGG00000020500	PAPOLA	99	94.841	Gopherus_agassizii
ENSCGRG00000003664	-	100	95.700	ENSGGOG00000006287	PAPOLA	100	95.181	Gorilla_gorilla
ENSCGRG00000003664	-	100	96.667	ENSHGLG00000007909	-	99	96.667	Heterocephalus_glaber_female
ENSCGRG00000003664	-	99	83.651	ENSHGLG00000017457	-	100	82.970	Heterocephalus_glaber_female
ENSCGRG00000003664	-	100	77.853	ENSHGLG00000007467	-	100	77.328	Heterocephalus_glaber_female
ENSCGRG00000003664	-	100	96.522	ENSHGLG00100017273	PAPOLA	99	96.522	Heterocephalus_glaber_male
ENSCGRG00000003664	-	100	68.354	ENSIPUG00000005919	papola	100	67.975	Ictalurus_punctatus
ENSCGRG00000003664	-	100	97.536	ENSSTOG00000011471	PAPOLA	99	97.536	Ictidomys_tridecemlineatus
ENSCGRG00000003664	-	100	96.812	ENSJJAG00000024340	Papola	100	96.812	Jaculus_jaculus
ENSCGRG00000003664	-	100	76.923	ENSLACG00000018136	PAPOLA	100	76.747	Latimeria_chalumnae
ENSCGRG00000003664	-	100	65.912	ENSLOCG00000008632	papola	99	66.045	Lepisosteus_oculatus
ENSCGRG00000003664	-	100	95.380	ENSLAFG00000000946	PAPOLA	99	95.380	Loxodonta_africana
ENSCGRG00000003664	-	100	95.700	ENSMFAG00000001792	PAPOLA	99	98.706	Macaca_fascicularis
ENSCGRG00000003664	-	100	96.695	ENSMMUG00000018610	PAPOLA	99	96.695	Macaca_mulatta
ENSCGRG00000003664	-	100	96.695	ENSMNEG00000043747	PAPOLA	100	97.431	Macaca_nemestrina
ENSCGRG00000003664	-	100	95.700	ENSMLEG00000032066	PAPOLA	100	95.181	Mandrillus_leucophaeus
ENSCGRG00000003664	-	84	89.533	ENSMGAG00000013228	-	100	89.533	Meleagris_gallopavo
ENSCGRG00000003664	-	100	99.565	ENSMAUG00000017178	Papola	100	98.785	Mesocricetus_auratus
ENSCGRG00000003664	-	100	97.971	ENSMICG00000010347	PAPOLA	99	97.971	Microcebus_murinus
ENSCGRG00000003664	-	100	99.420	ENSMOCG00000021670	Papola	100	98.650	Microtus_ochrogaster
ENSCGRG00000003664	-	100	95.380	ENSMODG00000012887	-	100	95.007	Monodelphis_domestica
ENSCGRG00000003664	-	99	81.311	ENSMODG00000001969	-	99	81.450	Monodelphis_domestica
ENSCGRG00000003664	-	100	98.406	MGP_CAROLIEiJ_G0018093	Papola	100	97.571	Mus_caroli
ENSCGRG00000003664	-	100	98.696	ENSMUSG00000021111	Papola	100	97.976	Mus_musculus
ENSCGRG00000003664	-	100	98.696	MGP_PahariEiJ_G0029850	Papola	100	97.976	Mus_pahari
ENSCGRG00000003664	-	100	98.841	MGP_SPRETEiJ_G0018943	Papola	100	98.111	Mus_spretus
ENSCGRG00000003664	-	100	96.875	ENSMPUG00000003054	PAPOLA	100	96.491	Mustela_putorius_furo
ENSCGRG00000003664	-	100	94.429	ENSMLUG00000010922	PAPOLA	100	94.062	Myotis_lucifugus
ENSCGRG00000003664	-	100	97.391	ENSNGAG00000022172	Papola	99	97.391	Nannospalax_galili
ENSCGRG00000003664	-	100	91.206	ENSNLEG00000000625	PAPOLA	100	90.293	Nomascus_leucogenys
ENSCGRG00000003664	-	67	86.260	ENSMEUG00000007831	-	74	85.827	Notamacropus_eugenii
ENSCGRG00000003664	-	98	90.846	ENSOPRG00000007625	PAPOLA	100	90.846	Ochotona_princeps
ENSCGRG00000003664	-	69	54.219	ENSONIG00000001062	-	96	54.219	Oreochromis_niloticus
ENSCGRG00000003664	-	100	96.667	ENSOANG00000013812	PAPOLA	99	96.667	Ornithorhynchus_anatinus
ENSCGRG00000003664	-	100	93.351	ENSOCUG00000011531	PAPOLA	99	93.351	Oryctolagus_cuniculus
ENSCGRG00000003664	-	100	96.472	ENSOGAG00000004611	PAPOLA	100	96.092	Otolemur_garnettii
ENSCGRG00000003664	-	100	96.467	ENSOARG00000016579	-	100	96.086	Ovis_aries
ENSCGRG00000003664	-	100	95.700	ENSPPAG00000030505	PAPOLA	100	95.181	Pan_paniscus
ENSCGRG00000003664	-	100	96.783	ENSPPRG00000008616	PAPOLA	100	96.356	Panthera_pardus
ENSCGRG00000003664	-	100	96.783	ENSPTIG00000018852	PAPOLA	99	96.783	Panthera_tigris_altaica
ENSCGRG00000003664	-	100	95.700	ENSPTRG00000006704	PAPOLA	100	95.181	Pan_troglodytes
ENSCGRG00000003664	-	100	96.695	ENSPANG00000025582	PAPOLA	98	98.883	Papio_anubis
ENSCGRG00000003664	-	99	70.621	ENSPKIG00000014471	papola	99	71.310	Paramormyrops_kingsleyae
ENSCGRG00000003664	-	100	93.216	ENSPSIG00000014157	PAPOLA	87	92.857	Pelodiscus_sinensis
ENSCGRG00000003664	-	100	99.321	ENSPEMG00000000043	Papola	100	98.920	Peromyscus_maniculatus_bairdii
ENSCGRG00000003664	-	100	95.115	ENSPCIG00000013234	PAPOLA	100	95.501	Phascolarctos_cinereus
ENSCGRG00000003664	-	100	93.261	ENSPPYG00000006128	PAPOLA	99	93.261	Pongo_abelii
ENSCGRG00000003664	-	89	90.701	ENSPCAG00000004199	PAPOLA	100	90.701	Procavia_capensis
ENSCGRG00000003664	-	100	93.768	ENSPCOG00000022117	PAPOLA	99	93.768	Propithecus_coquereli
ENSCGRG00000003664	-	100	95.245	ENSPVAG00000013925	PAPOLA	100	94.872	Pteropus_vampyrus
ENSCGRG00000003664	-	100	72.380	ENSPNAG00000010467	papola	99	72.404	Pygocentrus_nattereri
ENSCGRG00000003664	-	100	97.962	ENSRNOG00000004827	Papola	100	97.571	Rattus_norvegicus
ENSCGRG00000003664	-	100	96.264	ENSRBIG00000038490	PAPOLA	97	98.305	Rhinopithecus_bieti
ENSCGRG00000003664	-	100	95.700	ENSRROG00000025545	PAPOLA	100	95.181	Rhinopithecus_roxellana
ENSCGRG00000003664	-	100	96.552	ENSSBOG00000024061	PAPOLA	97	98.682	Saimiri_boliviensis_boliviensis
ENSCGRG00000003664	-	100	95.109	ENSSHAG00000015211	PAPOLA	100	94.858	Sarcophilus_harrisii
ENSCGRG00000003664	-	98	72.011	ENSSFOG00015004431	papola	99	84.783	Scleropages_formosus
ENSCGRG00000003664	-	98	47.731	ENSSDUG00000018247	-	97	46.695	Seriola_dumerili
ENSCGRG00000003664	-	100	91.914	ENSSPUG00000005835	PAPOLA	100	91.914	Sphenodon_punctatus
ENSCGRG00000003664	-	100	97.536	ENSSSCG00000002505	-	99	97.536	Sus_scrofa
ENSCGRG00000003664	-	100	90.773	ENSTGUG00000012687	PAPOLA	99	90.773	Taeniopygia_guttata
ENSCGRG00000003664	-	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSCGRG00000003664	-	79	96.875	ENSTTRG00000005717	PAPOLA	80	89.535	Tursiops_truncatus
ENSCGRG00000003664	-	61	99.052	ENSUAMG00000025737	PAPOLA	98	99.052	Ursus_americanus
ENSCGRG00000003664	-	100	95.788	ENSVPAG00000006464	PAPOLA	100	95.788	Vicugna_pacos
ENSCGRG00000003664	-	100	97.536	ENSVVUG00000028340	PAPOLA	99	97.536	Vulpes_vulpes
ENSCGRG00000003664	-	100	83.696	ENSXETG00000013949	papola	100	83.401	Xenopus_tropicalis