EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000004120 (Gene tree)
Gene ID: -
Gene Symbol: Scaf8
Alias: A630086M08Rik|A930036P18Rik|Rbm16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 95879 bases
Position: chrJH000025.1:3454317-3550195
Accession: 100774924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000005621	RRM_1	PF00076.22	1.6e-08	1	1
ENSCGRP00000005622	RRM_1	PF00076.22	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000005720	-	3795	-	ENSCGRP00000005621	1264 (aa)	-	-
ENSCGRT00000005721	-	5891	XM_016976631	ENSCGRP00000005622	1283 (aa)	XP_016832120	-

Gene Model

Click here to download ENSCGRG00000004120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004120	Scaf8	99	91.918	ENSG00000213079	SCAF8	99	91.845	Homo_sapiens
ENSCGRG00000004120	Scaf8	85	69.678	ENSAPOG00000015527	SCAF8	76	68.568	Acanthochromis_polyacanthus
ENSCGRG00000004120	Scaf8	99	91.753	ENSAMEG00000007583	SCAF8	96	90.831	Ailuropoda_melanoleuca
ENSCGRG00000004120	Scaf8	85	69.802	ENSAOCG00000002421	SCAF8	76	69.678	Amphiprion_ocellaris
ENSCGRG00000004120	Scaf8	84	70.120	ENSATEG00000006959	SCAF8	96	69.681	Anabas_testudineus
ENSCGRG00000004120	Scaf8	99	77.255	ENSAPLG00000005765	SCAF8	100	76.809	Anas_platyrhynchos
ENSCGRG00000004120	Scaf8	99	73.516	ENSACAG00000005282	SCAF8	99	73.684	Anolis_carolinensis
ENSCGRG00000004120	Scaf8	99	91.759	ENSANAG00000036184	SCAF8	99	91.759	Aotus_nancymaae
ENSCGRG00000004120	Scaf8	82	72.980	ENSACLG00000018828	SCAF8	76	72.715	Astatotilapia_calliptera
ENSCGRG00000004120	Scaf8	99	91.032	ENSBTAG00000031917	SCAF8	99	91.032	Bos_taurus
ENSCGRG00000004120	Scaf8	99	91.601	ENSCJAG00000012631	SCAF8	95	90.681	Callithrix_jacchus
ENSCGRG00000004120	Scaf8	99	91.759	ENSCAFG00000000570	SCAF8	99	91.759	Canis_familiaris
ENSCGRG00000004120	Scaf8	99	91.759	ENSCAFG00020015048	SCAF8	99	91.516	Canis_lupus_dingo
ENSCGRG00000004120	Scaf8	99	90.816	ENSCHIG00000025041	SCAF8	99	90.816	Capra_hircus
ENSCGRG00000004120	Scaf8	99	91.521	ENSTSYG00000010991	SCAF8	98	90.603	Carlito_syrichta
ENSCGRG00000004120	Scaf8	99	83.940	ENSCPOG00000022216	-	99	83.149	Cavia_porcellus
ENSCGRG00000004120	Scaf8	99	91.759	ENSCCAG00000024952	SCAF8	99	91.686	Cebus_capucinus
ENSCGRG00000004120	Scaf8	99	92.235	ENSCATG00000035361	SCAF8	99	92.235	Cercocebus_atys
ENSCGRG00000004120	Scaf8	99	91.819	ENSCLAG00000004910	SCAF8	100	91.819	Chinchilla_lanigera
ENSCGRG00000004120	Scaf8	99	92.314	ENSCSAG00000013430	SCAF8	99	91.386	Chlorocebus_sabaeus
ENSCGRG00000004120	Scaf8	99	73.669	ENSCPBG00000016330	SCAF8	99	73.669	Chrysemys_picta_bellii
ENSCGRG00000004120	Scaf8	99	91.997	ENSCANG00000039499	SCAF8	99	91.997	Colobus_angolensis_palliatus
ENSCGRG00000004120	Scaf8	99	100.000	ENSCGRG00001020167	Scaf8	99	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000004120	Scaf8	86	65.895	ENSCSEG00000000043	-	77	71.466	Cynoglossus_semilaevis
ENSCGRG00000004120	Scaf8	83	66.028	ENSCVAG00000000925	SCAF8	77	65.773	Cyprinodon_variegatus
ENSCGRG00000004120	Scaf8	96	86.382	ENSDNOG00000025271	SCAF8	100	89.992	Dasypus_novemcinctus
ENSCGRG00000004120	Scaf8	99	91.311	ENSDORG00000006391	Scaf8	100	91.404	Dipodomys_ordii
ENSCGRG00000004120	Scaf8	99	91.515	ENSEASG00005018879	SCAF8	99	91.370	Equus_asinus_asinus
ENSCGRG00000004120	Scaf8	99	91.594	ENSECAG00000005540	SCAF8	99	91.521	Equus_caballus
ENSCGRG00000004120	Scaf8	81	70.642	ENSELUG00000002779	SCAF8	72	69.856	Esox_lucius
ENSCGRG00000004120	Scaf8	99	92.228	ENSFCAG00000023424	SCAF8	99	92.228	Felis_catus
ENSCGRG00000004120	Scaf8	99	75.718	ENSFALG00000012433	SCAF8	99	76.664	Ficedula_albicollis
ENSCGRG00000004120	Scaf8	99	91.204	ENSFDAG00000010335	SCAF8	99	91.277	Fukomys_damarensis
ENSCGRG00000004120	Scaf8	92	66.348	ENSFHEG00000008284	SCAF8	77	71.258	Fundulus_heteroclitus
ENSCGRG00000004120	Scaf8	80	57.256	ENSGMOG00000018812	SCAF8	83	59.037	Gadus_morhua
ENSCGRG00000004120	Scaf8	99	77.795	ENSGALG00000013635	SCAF8	98	77.586	Gallus_gallus
ENSCGRG00000004120	Scaf8	57	56.186	ENSGAFG00000018033	SCAF8	77	63.701	Gambusia_affinis
ENSCGRG00000004120	Scaf8	93	53.339	ENSGACG00000006909	SCAF8	99	54.493	Gasterosteus_aculeatus
ENSCGRG00000004120	Scaf8	63	70.074	ENSGAGG00000017820	-	88	70.074	Gopherus_agassizii
ENSCGRG00000004120	Scaf8	99	91.838	ENSGGOG00000008645	SCAF8	99	91.838	Gorilla_gorilla
ENSCGRG00000004120	Scaf8	82	72.848	ENSHBUG00000019537	SCAF8	76	72.583	Haplochromis_burtoni
ENSCGRG00000004120	Scaf8	99	91.356	ENSHGLG00000003619	SCAF8	99	91.356	Heterocephalus_glaber_female
ENSCGRG00000004120	Scaf8	99	91.356	ENSHGLG00100004708	SCAF8	100	91.356	Heterocephalus_glaber_male
ENSCGRG00000004120	Scaf8	99	92.868	ENSSTOG00000026043	SCAF8	99	92.868	Ictidomys_tridecemlineatus
ENSCGRG00000004120	Scaf8	99	91.924	ENSJJAG00000020480	Scaf8	99	92.143	Jaculus_jaculus
ENSCGRG00000004120	Scaf8	92	69.125	ENSKMAG00000012767	SCAF8	78	66.905	Kryptolebias_marmoratus
ENSCGRG00000004120	Scaf8	59	76.667	ENSLBEG00000012484	-	63	76.786	Labrus_bergylta
ENSCGRG00000004120	Scaf8	88	75.735	ENSLACG00000001394	SCAF8	99	62.395	Latimeria_chalumnae
ENSCGRG00000004120	Scaf8	99	61.072	ENSLOCG00000016856	SCAF8	99	60.284	Lepisosteus_oculatus
ENSCGRG00000004120	Scaf8	99	89.960	ENSLAFG00000000022	SCAF8	100	89.679	Loxodonta_africana
ENSCGRG00000004120	Scaf8	99	92.314	ENSMFAG00000032738	SCAF8	99	92.241	Macaca_fascicularis
ENSCGRG00000004120	Scaf8	99	92.314	ENSMMUG00000015163	SCAF8	99	92.241	Macaca_mulatta
ENSCGRG00000004120	Scaf8	99	92.314	ENSMNEG00000043466	SCAF8	99	92.314	Macaca_nemestrina
ENSCGRG00000004120	Scaf8	99	92.314	ENSMLEG00000034845	SCAF8	99	92.314	Mandrillus_leucophaeus
ENSCGRG00000004120	Scaf8	89	65.434	ENSMAMG00000009457	SCAF8	76	64.796	Mastacembelus_armatus
ENSCGRG00000004120	Scaf8	82	72.848	ENSMZEG00005005698	SCAF8	76	72.583	Maylandia_zebra
ENSCGRG00000004120	Scaf8	99	77.181	ENSMGAG00000012762	SCAF8	99	77.127	Meleagris_gallopavo
ENSCGRG00000004120	Scaf8	99	98.650	ENSMAUG00000009513	Scaf8	100	98.650	Mesocricetus_auratus
ENSCGRG00000004120	Scaf8	99	91.053	ENSMICG00000028965	SCAF8	99	90.823	Microcebus_murinus
ENSCGRG00000004120	Scaf8	99	97.617	ENSMOCG00000014950	Scaf8	99	97.617	Microtus_ochrogaster
ENSCGRG00000004120	Scaf8	80	67.925	ENSMMOG00000002216	SCAF8	75	67.116	Mola_mola
ENSCGRG00000004120	Scaf8	99	84.877	ENSMODG00000008301	SCAF8	99	84.877	Monodelphis_domestica
ENSCGRG00000004120	Scaf8	88	67.394	ENSMALG00000011584	SCAF8	78	67.676	Monopterus_albus
ENSCGRG00000004120	Scaf8	99	95.635	MGP_CAROLIEiJ_G0021016	Scaf8	99	95.635	Mus_caroli
ENSCGRG00000004120	Scaf8	99	95.714	ENSMUSG00000046201	Scaf8	99	95.714	Mus_musculus
ENSCGRG00000004120	Scaf8	99	96.508	MGP_PahariEiJ_G0023334	Scaf8	99	96.508	Mus_pahari
ENSCGRG00000004120	Scaf8	99	91.753	ENSMPUG00000001974	SCAF8	99	90.831	Mustela_putorius_furo
ENSCGRG00000004120	Scaf8	99	90.254	ENSMLUG00000029190	SCAF8	100	89.693	Myotis_lucifugus
ENSCGRG00000004120	Scaf8	99	93.333	ENSNGAG00000012332	Scaf8	99	93.333	Nannospalax_galili
ENSCGRG00000004120	Scaf8	99	52.987	ENSNBRG00000009067	SCAF8	99	52.595	Neolamprologus_brichardi
ENSCGRG00000004120	Scaf8	99	90.521	ENSNLEG00000015509	SCAF8	99	90.593	Nomascus_leucogenys
ENSCGRG00000004120	Scaf8	70	90.179	ENSOPRG00000018413	-	76	90.909	Ochotona_princeps
ENSCGRG00000004120	Scaf8	99	90.974	ENSODEG00000007296	SCAF8	99	90.974	Octodon_degus
ENSCGRG00000004120	Scaf8	99	55.140	ENSONIG00000008119	SCAF8	99	54.602	Oreochromis_niloticus
ENSCGRG00000004120	Scaf8	99	93.185	ENSOCUG00000026063	SCAF8	99	93.185	Oryctolagus_cuniculus
ENSCGRG00000004120	Scaf8	92	56.633	ENSORLG00000017358	SCAF8	54	71.805	Oryzias_latipes
ENSCGRG00000004120	Scaf8	92	56.799	ENSORLG00020002214	SCAF8	54	71.937	Oryzias_latipes_hni
ENSCGRG00000004120	Scaf8	92	56.763	ENSORLG00015015779	SCAF8	54	72.069	Oryzias_latipes_hsok
ENSCGRG00000004120	Scaf8	92	56.569	ENSOMEG00000015471	SCAF8	77	72.318	Oryzias_melastigma
ENSCGRG00000004120	Scaf8	99	91.363	ENSOGAG00000034223	SCAF8	95	90.446	Otolemur_garnettii
ENSCGRG00000004120	Scaf8	99	90.642	ENSOARG00000004159	SCAF8	100	90.722	Ovis_aries
ENSCGRG00000004120	Scaf8	99	91.766	ENSPPAG00000039826	SCAF8	99	91.838	Pan_paniscus
ENSCGRG00000004120	Scaf8	99	92.155	ENSPPRG00000023175	SCAF8	99	92.155	Panthera_pardus
ENSCGRG00000004120	Scaf8	99	92.228	ENSPTIG00000014836	SCAF8	99	92.228	Panthera_tigris_altaica
ENSCGRG00000004120	Scaf8	99	91.918	ENSPTRG00000018727	SCAF8	99	91.845	Pan_troglodytes
ENSCGRG00000004120	Scaf8	99	92.155	ENSPANG00000017489	SCAF8	99	90.808	Papio_anubis
ENSCGRG00000004120	Scaf8	93	60.336	ENSPKIG00000021212	SCAF8	99	56.591	Paramormyrops_kingsleyae
ENSCGRG00000004120	Scaf8	89	74.157	ENSPSIG00000008614	SCAF8	95	75.064	Pelodiscus_sinensis
ENSCGRG00000004120	Scaf8	99	97.855	ENSPEMG00000010531	Scaf8	100	97.855	Peromyscus_maniculatus_bairdii
ENSCGRG00000004120	Scaf8	99	85.036	ENSPCIG00000001141	SCAF8	99	85.036	Phascolarctos_cinereus
ENSCGRG00000004120	Scaf8	53	54.501	ENSPFOG00000004176	SCAF8	99	53.939	Poecilia_formosa
ENSCGRG00000004120	Scaf8	89	66.049	ENSPLAG00000021432	SCAF8	77	65.817	Poecilia_latipinna
ENSCGRG00000004120	Scaf8	57	54.501	ENSPMEG00000007591	SCAF8	84	65.550	Poecilia_mexicana
ENSCGRG00000004120	Scaf8	92	67.182	ENSPREG00000000652	SCAF8	77	66.944	Poecilia_reticulata
ENSCGRG00000004120	Scaf8	99	90.514	ENSPPYG00000017121	SCAF8	99	90.198	Pongo_abelii
ENSCGRG00000004120	Scaf8	85	96.259	ENSPCAG00000013044	SCAF8	90	95.777	Procavia_capensis
ENSCGRG00000004120	Scaf8	99	91.924	ENSPCOG00000002067	SCAF8	99	91.627	Propithecus_coquereli
ENSCGRG00000004120	Scaf8	98	88.638	ENSPVAG00000005582	SCAF8	99	89.766	Pteropus_vampyrus
ENSCGRG00000004120	Scaf8	82	72.980	ENSPNYG00000007277	SCAF8	76	72.715	Pundamilia_nyererei
ENSCGRG00000004120	Scaf8	85	68.820	ENSPNAG00000024740	SCAF8	81	69.317	Pygocentrus_nattereri
ENSCGRG00000004120	Scaf8	99	96.349	ENSRNOG00000016919	Scaf8	99	96.349	Rattus_norvegicus
ENSCGRG00000004120	Scaf8	99	92.076	ENSRBIG00000035769	SCAF8	99	92.076	Rhinopithecus_bieti
ENSCGRG00000004120	Scaf8	99	91.997	ENSRROG00000013580	SCAF8	99	91.997	Rhinopithecus_roxellana
ENSCGRG00000004120	Scaf8	99	91.686	ENSSBOG00000027023	SCAF8	99	91.686	Saimiri_boliviensis_boliviensis
ENSCGRG00000004120	Scaf8	99	84.664	ENSSHAG00000009915	SCAF8	100	83.881	Sarcophilus_harrisii
ENSCGRG00000004120	Scaf8	92	56.686	ENSSFOG00015009481	SCAF8	94	66.154	Scleropages_formosus
ENSCGRG00000004120	Scaf8	85	68.897	ENSSMAG00000008275	SCAF8	76	68.525	Scophthalmus_maximus
ENSCGRG00000004120	Scaf8	99	76.006	ENSSPUG00000015219	SCAF8	99	76.006	Sphenodon_punctatus
ENSCGRG00000004120	Scaf8	99	91.197	ENSSSCG00000004070	SCAF8	100	91.091	Sus_scrofa
ENSCGRG00000004120	Scaf8	99	77.690	ENSTGUG00000011151	SCAF8	100	77.926	Taeniopygia_guttata
ENSCGRG00000004120	Scaf8	82	70.277	ENSTRUG00000009243	SCAF8	75	70.277	Takifugu_rubripes
ENSCGRG00000004120	Scaf8	93	54.222	ENSTNIG00000016885	SCAF8	99	54.380	Tetraodon_nigroviridis
ENSCGRG00000004120	Scaf8	99	90.642	ENSTTRG00000014538	SCAF8	100	90.642	Tursiops_truncatus
ENSCGRG00000004120	Scaf8	99	91.442	ENSUAMG00000024736	SCAF8	100	91.377	Ursus_americanus
ENSCGRG00000004120	Scaf8	98	91.493	ENSUMAG00000013404	SCAF8	100	91.493	Ursus_maritimus
ENSCGRG00000004120	Scaf8	67	84.750	ENSVPAG00000012465	SCAF8	99	82.333	Vicugna_pacos
ENSCGRG00000004120	Scaf8	99	91.838	ENSVVUG00000007532	SCAF8	100	91.734	Vulpes_vulpes
ENSCGRG00000004120	Scaf8	99	60.700	ENSXETG00000013132	scaf8	99	60.876	Xenopus_tropicalis
ENSCGRG00000004120	Scaf8	92	66.944	ENSXMAG00000019192	SCAF8	77	66.825	Xiphophorus_maculatus