EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000004316 (Gene tree)
Gene ID: -
Gene Symbol: Lsm12
Alias: 1110032E16Rik|2600001B17Rik
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 20498 bases
Position: chrJH000492.1:259632-280129
Accession: 100761943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000005887	AD	PF09793.9	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000005990	-	534	XM_007645037	ENSCGRP00000005887	177 (aa)	XP_007643227	-

Gene Model

Click here to download ENSCGRG00000004316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004316	Lsm12	95	92.857	ENSG00000161654	LSM12	86	92.857	Homo_sapiens
ENSCGRG00000004316	Lsm12	98	78.161	ENSAPOG00000007907	lsm12b	89	78.161	Acanthochromis_polyacanthus
ENSCGRG00000004316	Lsm12	87	99.351	ENSAMEG00000018321	LSM12	78	99.351	Ailuropoda_melanoleuca
ENSCGRG00000004316	Lsm12	98	76.437	ENSACIG00000008538	lsm12b	89	76.437	Amphilophus_citrinellus
ENSCGRG00000004316	Lsm12	98	77.586	ENSAOCG00000021847	lsm12b	78	77.586	Amphiprion_ocellaris
ENSCGRG00000004316	Lsm12	98	77.586	ENSAPEG00000002252	lsm12b	89	77.586	Amphiprion_percula
ENSCGRG00000004316	Lsm12	98	77.011	ENSATEG00000005705	lsm12b	89	77.011	Anabas_testudineus
ENSCGRG00000004316	Lsm12	87	94.156	ENSACAG00000004618	LSM12	79	94.156	Anolis_carolinensis
ENSCGRG00000004316	Lsm12	95	92.857	ENSANAG00000029011	LSM12	80	100.000	Aotus_nancymaae
ENSCGRG00000004316	Lsm12	98	77.011	ENSACLG00000026332	lsm12b	89	77.011	Astatotilapia_calliptera
ENSCGRG00000004316	Lsm12	98	72.989	ENSAMXG00000036117	lsm12a	81	72.989	Astyanax_mexicanus
ENSCGRG00000004316	Lsm12	98	77.011	ENSAMXG00000032952	lsm12b	89	77.011	Astyanax_mexicanus
ENSCGRG00000004316	Lsm12	95	92.857	ENSBTAG00000016252	LSM12	86	92.857	Bos_taurus
ENSCGRG00000004316	Lsm12	95	92.857	ENSCJAG00000048480	LSM12	80	100.000	Callithrix_jacchus
ENSCGRG00000004316	Lsm12	95	92.857	ENSCAFG00000014379	LSM12	72	100.000	Canis_familiaris
ENSCGRG00000004316	Lsm12	95	92.857	ENSCAFG00020012173	LSM12	86	92.857	Canis_lupus_dingo
ENSCGRG00000004316	Lsm12	95	92.857	ENSCHIG00000018175	LSM12	86	92.857	Capra_hircus
ENSCGRG00000004316	Lsm12	95	92.857	ENSTSYG00000036361	LSM12	86	92.857	Carlito_syrichta
ENSCGRG00000004316	Lsm12	94	93.413	ENSCAPG00000009647	LSM12	91	93.413	Cavia_aperea
ENSCGRG00000004316	Lsm12	87	98.701	ENSCPOG00000012860	LSM12	80	98.165	Cavia_porcellus
ENSCGRG00000004316	Lsm12	95	92.857	ENSCCAG00000032905	LSM12	80	100.000	Cebus_capucinus
ENSCGRG00000004316	Lsm12	95	92.857	ENSCATG00000030577	-	80	100.000	Cercocebus_atys
ENSCGRG00000004316	Lsm12	95	91.667	ENSCLAG00000015759	LSM12	80	98.165	Chinchilla_lanigera
ENSCGRG00000004316	Lsm12	95	92.262	ENSCSAG00000003486	LSM12	86	92.262	Chlorocebus_sabaeus
ENSCGRG00000004316	Lsm12	62	99.083	ENSCHOG00000001198	LSM12	100	99.083	Choloepus_hoffmanni
ENSCGRG00000004316	Lsm12	87	92.857	ENSCPBG00000027105	LSM12	79	92.857	Chrysemys_picta_bellii
ENSCGRG00000004316	Lsm12	95	92.857	ENSCANG00000043328	LSM12	80	100.000	Colobus_angolensis_palliatus
ENSCGRG00000004316	Lsm12	95	92.857	ENSCGRG00001002094	Lsm12	80	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000004316	Lsm12	98	76.437	ENSCSEG00000008434	lsm12b	89	76.437	Cynoglossus_semilaevis
ENSCGRG00000004316	Lsm12	98	77.011	ENSCVAG00000008755	lsm12b	89	77.011	Cyprinodon_variegatus
ENSCGRG00000004316	Lsm12	98	68.391	ENSDARG00000028848	lsm12a	89	68.391	Danio_rerio
ENSCGRG00000004316	Lsm12	98	77.586	ENSDARG00000109510	lsm12b	89	77.586	Danio_rerio
ENSCGRG00000004316	Lsm12	95	92.262	ENSDNOG00000002418	LSM12	72	99.351	Dasypus_novemcinctus
ENSCGRG00000004316	Lsm12	95	92.857	ENSDORG00000016381	Lsm12	80	100.000	Dipodomys_ordii
ENSCGRG00000004316	Lsm12	87	88.312	ENSETEG00000011012	-	88	88.312	Echinops_telfairi
ENSCGRG00000004316	Lsm12	95	92.262	ENSETEG00000008374	LSM12	86	92.262	Echinops_telfairi
ENSCGRG00000004316	Lsm12	82	55.862	ENSEBUG00000016299	lsm12a	81	55.862	Eptatretus_burgeri
ENSCGRG00000004316	Lsm12	95	92.857	ENSEASG00005010155	LSM12	86	92.857	Equus_asinus_asinus
ENSCGRG00000004316	Lsm12	95	92.857	ENSECAG00000009071	LSM12	80	100.000	Equus_caballus
ENSCGRG00000004316	Lsm12	86	98.693	ENSEEUG00000002419	-	100	98.693	Erinaceus_europaeus
ENSCGRG00000004316	Lsm12	98	74.138	ENSELUG00000000256	-	89	74.138	Esox_lucius
ENSCGRG00000004316	Lsm12	98	75.862	ENSELUG00000015538	lsm12b	88	70.690	Esox_lucius
ENSCGRG00000004316	Lsm12	95	92.857	ENSFCAG00000037021	LSM12	86	92.857	Felis_catus
ENSCGRG00000004316	Lsm12	84	99.324	ENSFDAG00000008954	LSM12	87	99.324	Fukomys_damarensis
ENSCGRG00000004316	Lsm12	98	75.862	ENSFHEG00000019913	lsm12b	89	75.862	Fundulus_heteroclitus
ENSCGRG00000004316	Lsm12	87	84.416	ENSGMOG00000015449	lsm12b	97	84.416	Gadus_morhua
ENSCGRG00000004316	Lsm12	86	94.118	ENSGALG00000039803	LSM12	100	94.118	Gallus_gallus
ENSCGRG00000004316	Lsm12	98	76.437	ENSGAFG00000011829	lsm12b	89	76.437	Gambusia_affinis
ENSCGRG00000004316	Lsm12	87	85.065	ENSGACG00000003428	lsm12b	97	85.065	Gasterosteus_aculeatus
ENSCGRG00000004316	Lsm12	87	94.156	ENSGAGG00000021965	LSM12	79	94.156	Gopherus_agassizii
ENSCGRG00000004316	Lsm12	95	92.857	ENSGGOG00000010589	-	80	100.000	Gorilla_gorilla
ENSCGRG00000004316	Lsm12	95	79.762	ENSHBUG00000007667	lsm12b	73	79.762	Haplochromis_burtoni
ENSCGRG00000004316	Lsm12	95	92.857	ENSHGLG00000011411	LSM12	80	100.000	Heterocephalus_glaber_female
ENSCGRG00000004316	Lsm12	88	98.077	ENSHGLG00100000241	LSM12	83	98.077	Heterocephalus_glaber_male
ENSCGRG00000004316	Lsm12	95	77.976	ENSHCOG00000002094	lsm12b	86	77.976	Hippocampus_comes
ENSCGRG00000004316	Lsm12	98	77.586	ENSIPUG00000014800	lsm12	89	77.586	Ictalurus_punctatus
ENSCGRG00000004316	Lsm12	97	68.023	ENSIPUG00000008936	lsm12a	88	68.023	Ictalurus_punctatus
ENSCGRG00000004316	Lsm12	95	92.857	ENSSTOG00000007403	LSM12	80	100.000	Ictidomys_tridecemlineatus
ENSCGRG00000004316	Lsm12	95	91.667	ENSJJAG00000004364	-	81	97.297	Jaculus_jaculus
ENSCGRG00000004316	Lsm12	71	86.400	ENSJJAG00000014652	-	73	86.400	Jaculus_jaculus
ENSCGRG00000004316	Lsm12	87	87.742	ENSJJAG00000011793	-	81	87.742	Jaculus_jaculus
ENSCGRG00000004316	Lsm12	85	74.510	ENSKMAG00000007704	lsm12b	52	74.510	Kryptolebias_marmoratus
ENSCGRG00000004316	Lsm12	98	77.586	ENSLBEG00000027999	lsm12b	89	77.586	Labrus_bergylta
ENSCGRG00000004316	Lsm12	98	82.184	ENSLACG00000015981	LSM12	90	82.184	Latimeria_chalumnae
ENSCGRG00000004316	Lsm12	98	75.862	ENSLOCG00000013079	lsm12b	88	75.862	Lepisosteus_oculatus
ENSCGRG00000004316	Lsm12	95	92.857	ENSLAFG00000005202	LSM12	86	92.857	Loxodonta_africana
ENSCGRG00000004316	Lsm12	95	92.857	ENSMFAG00000031376	LSM12	80	100.000	Macaca_fascicularis
ENSCGRG00000004316	Lsm12	95	92.857	ENSMMUG00000006804	LSM12	80	100.000	Macaca_mulatta
ENSCGRG00000004316	Lsm12	95	92.857	ENSMNEG00000030594	-	80	100.000	Macaca_nemestrina
ENSCGRG00000004316	Lsm12	95	92.857	ENSMLEG00000039934	LSM12	80	100.000	Mandrillus_leucophaeus
ENSCGRG00000004316	Lsm12	98	77.011	ENSMAMG00000004279	lsm12b	89	77.011	Mastacembelus_armatus
ENSCGRG00000004316	Lsm12	98	77.011	ENSMZEG00005005754	lsm12b	89	77.011	Maylandia_zebra
ENSCGRG00000004316	Lsm12	95	92.262	ENSMICG00000037219	LSM12	80	99.083	Microcebus_murinus
ENSCGRG00000004316	Lsm12	97	75.000	ENSMOCG00000017015	-	75	75.000	Microtus_ochrogaster
ENSCGRG00000004316	Lsm12	95	92.857	ENSMOCG00000019878	-	80	100.000	Microtus_ochrogaster
ENSCGRG00000004316	Lsm12	98	77.011	ENSMMOG00000020848	lsm12b	89	77.011	Mola_mola
ENSCGRG00000004316	Lsm12	98	77.586	ENSMALG00000007578	lsm12b	89	77.586	Monopterus_albus
ENSCGRG00000004316	Lsm12	95	92.262	MGP_CAROLIEiJ_G0017241	Lsm12	80	99.083	Mus_caroli
ENSCGRG00000004316	Lsm12	95	92.857	ENSMUSG00000020922	Lsm12	80	100.000	Mus_musculus
ENSCGRG00000004316	Lsm12	95	84.324	MGP_PahariEiJ_G0018371	Lsm12	80	100.000	Mus_pahari
ENSCGRG00000004316	Lsm12	95	92.262	MGP_SPRETEiJ_G0018084	Lsm12	79	100.000	Mus_spretus
ENSCGRG00000004316	Lsm12	95	92.262	ENSMLUG00000006391	LSM12	86	92.262	Myotis_lucifugus
ENSCGRG00000004316	Lsm12	85	74.172	ENSNGAG00000015429	-	77	74.172	Nannospalax_galili
ENSCGRG00000004316	Lsm12	95	92.857	ENSNGAG00000001870	Lsm12	80	100.000	Nannospalax_galili
ENSCGRG00000004316	Lsm12	98	77.011	ENSNBRG00000006266	lsm12b	89	77.011	Neolamprologus_brichardi
ENSCGRG00000004316	Lsm12	95	92.857	ENSNLEG00000005580	-	80	100.000	Nomascus_leucogenys
ENSCGRG00000004316	Lsm12	70	97.581	ENSMEUG00000007501	-	75	97.581	Notamacropus_eugenii
ENSCGRG00000004316	Lsm12	95	92.857	ENSOPRG00000008552	LSM12	86	92.857	Ochotona_princeps
ENSCGRG00000004316	Lsm12	87	88.312	ENSODEG00000007886	-	59	88.312	Octodon_degus
ENSCGRG00000004316	Lsm12	95	91.667	ENSODEG00000017998	-	80	98.165	Octodon_degus
ENSCGRG00000004316	Lsm12	98	77.011	ENSONIG00000007933	lsm12b	89	77.011	Oreochromis_niloticus
ENSCGRG00000004316	Lsm12	87	99.351	ENSOCUG00000008566	-	78	99.351	Oryctolagus_cuniculus
ENSCGRG00000004316	Lsm12	86	93.464	ENSOCUG00000021254	-	79	93.464	Oryctolagus_cuniculus
ENSCGRG00000004316	Lsm12	86	92.157	ENSOCUG00000024823	-	79	92.157	Oryctolagus_cuniculus
ENSCGRG00000004316	Lsm12	86	94.771	ENSOCUG00000027889	-	79	94.771	Oryctolagus_cuniculus
ENSCGRG00000004316	Lsm12	98	77.011	ENSORLG00000011310	lsm12b	89	77.011	Oryzias_latipes
ENSCGRG00000004316	Lsm12	98	77.011	ENSORLG00020002060	lsm12b	82	77.011	Oryzias_latipes_hni
ENSCGRG00000004316	Lsm12	98	77.011	ENSORLG00015001647	lsm12b	82	77.011	Oryzias_latipes_hsok
ENSCGRG00000004316	Lsm12	98	77.011	ENSOMEG00000006184	lsm12b	81	77.011	Oryzias_melastigma
ENSCGRG00000004316	Lsm12	95	92.262	ENSOGAG00000010489	LSM12	86	92.262	Otolemur_garnettii
ENSCGRG00000004316	Lsm12	87	99.351	ENSOARG00000006589	LSM12	77	99.351	Ovis_aries
ENSCGRG00000004316	Lsm12	98	90.230	ENSPPAG00000034974	-	94	90.230	Pan_paniscus
ENSCGRG00000004316	Lsm12	95	92.857	ENSPPRG00000023420	LSM12	86	92.857	Panthera_pardus
ENSCGRG00000004316	Lsm12	63	96.396	ENSPTIG00000014850	-	81	96.396	Panthera_tigris_altaica
ENSCGRG00000004316	Lsm12	86	100.000	ENSPTIG00000012704	-	82	100.000	Panthera_tigris_altaica
ENSCGRG00000004316	Lsm12	95	92.857	ENSPTRG00000009261	LSM12	80	100.000	Pan_troglodytes
ENSCGRG00000004316	Lsm12	95	92.857	ENSPANG00000021315	-	80	100.000	Papio_anubis
ENSCGRG00000004316	Lsm12	98	69.540	ENSPKIG00000017932	-	89	69.540	Paramormyrops_kingsleyae
ENSCGRG00000004316	Lsm12	98	77.586	ENSPKIG00000021058	lsm12b	89	77.586	Paramormyrops_kingsleyae
ENSCGRG00000004316	Lsm12	98	77.011	ENSPMGG00000021344	lsm12b	89	77.011	Periophthalmus_magnuspinnatus
ENSCGRG00000004316	Lsm12	95	92.857	ENSPEMG00000012199	Lsm12	80	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00000004316	Lsm12	86	59.477	ENSPMAG00000005461	lsm12a	88	59.477	Petromyzon_marinus
ENSCGRG00000004316	Lsm12	95	89.286	ENSPCIG00000020244	LSM12	86	89.286	Phascolarctos_cinereus
ENSCGRG00000004316	Lsm12	98	75.287	ENSPFOG00000015930	lsm12b	89	75.287	Poecilia_formosa
ENSCGRG00000004316	Lsm12	98	75.287	ENSPLAG00000021089	lsm12b	89	75.287	Poecilia_latipinna
ENSCGRG00000004316	Lsm12	98	75.287	ENSPMEG00000012961	lsm12b	89	75.287	Poecilia_mexicana
ENSCGRG00000004316	Lsm12	95	78.571	ENSPREG00000010236	lsm12b	93	78.571	Poecilia_reticulata
ENSCGRG00000004316	Lsm12	95	92.857	ENSPPYG00000008344	LSM12	86	92.857	Pongo_abelii
ENSCGRG00000004316	Lsm12	70	100.000	ENSPCAG00000008790	LSM12	78	100.000	Procavia_capensis
ENSCGRG00000004316	Lsm12	95	92.857	ENSPCOG00000027951	LSM12	80	100.000	Propithecus_coquereli
ENSCGRG00000004316	Lsm12	95	92.262	ENSPVAG00000013706	LSM12	86	92.262	Pteropus_vampyrus
ENSCGRG00000004316	Lsm12	98	77.011	ENSPNYG00000003386	lsm12b	89	77.011	Pundamilia_nyererei
ENSCGRG00000004316	Lsm12	98	75.287	ENSPNAG00000004186	lsm12b	89	75.287	Pygocentrus_nattereri
ENSCGRG00000004316	Lsm12	98	71.264	ENSPNAG00000018435	lsm12a	89	71.264	Pygocentrus_nattereri
ENSCGRG00000004316	Lsm12	95	92.857	ENSRNOG00000020894	Lsm12	86	92.857	Rattus_norvegicus
ENSCGRG00000004316	Lsm12	95	92.857	ENSRBIG00000027910	LSM12	80	100.000	Rhinopithecus_bieti
ENSCGRG00000004316	Lsm12	66	82.759	ENSRROG00000000537	-	80	82.759	Rhinopithecus_roxellana
ENSCGRG00000004316	Lsm12	95	92.857	ENSRROG00000045530	-	80	100.000	Rhinopithecus_roxellana
ENSCGRG00000004316	Lsm12	67	32.061	YHR121W	-	68	32.061	Saccharomyces_cerevisiae
ENSCGRG00000004316	Lsm12	95	92.857	ENSSBOG00000025310	LSM12	80	100.000	Saimiri_boliviensis_boliviensis
ENSCGRG00000004316	Lsm12	86	96.078	ENSSHAG00000014914	LSM12	97	96.078	Sarcophilus_harrisii
ENSCGRG00000004316	Lsm12	98	75.287	ENSSFOG00015020392	lsm12a	89	75.287	Scleropages_formosus
ENSCGRG00000004316	Lsm12	98	78.736	ENSSFOG00015009612	lsm12	89	78.736	Scleropages_formosus
ENSCGRG00000004316	Lsm12	98	77.586	ENSSMAG00000008089	lsm12b	89	77.586	Scophthalmus_maximus
ENSCGRG00000004316	Lsm12	98	78.161	ENSSDUG00000012711	lsm12b	89	78.161	Seriola_dumerili
ENSCGRG00000004316	Lsm12	98	78.161	ENSSLDG00000007404	lsm12b	89	78.161	Seriola_lalandi_dorsalis
ENSCGRG00000004316	Lsm12	86	99.346	ENSSARG00000005537	LSM12	100	99.346	Sorex_araneus
ENSCGRG00000004316	Lsm12	87	94.805	ENSSPUG00000011984	LSM12	79	94.805	Sphenodon_punctatus
ENSCGRG00000004316	Lsm12	98	77.586	ENSSPAG00000017058	lsm12b	89	77.586	Stegastes_partitus
ENSCGRG00000004316	Lsm12	95	92.857	ENSSSCG00000032394	LSM12	86	92.857	Sus_scrofa
ENSCGRG00000004316	Lsm12	98	75.862	ENSTRUG00000007121	lsm12b	89	75.862	Takifugu_rubripes
ENSCGRG00000004316	Lsm12	98	76.437	ENSTNIG00000014436	lsm12b	89	76.437	Tetraodon_nigroviridis
ENSCGRG00000004316	Lsm12	95	92.262	ENSTBEG00000012523	-	86	92.262	Tupaia_belangeri
ENSCGRG00000004316	Lsm12	87	95.455	ENSTBEG00000012392	-	79	95.455	Tupaia_belangeri
ENSCGRG00000004316	Lsm12	95	92.857	ENSTTRG00000010433	LSM12	86	92.857	Tursiops_truncatus
ENSCGRG00000004316	Lsm12	95	92.857	ENSUAMG00000006313	LSM12	96	99.351	Ursus_americanus
ENSCGRG00000004316	Lsm12	87	99.351	ENSUMAG00000012987	LSM12	88	99.351	Ursus_maritimus
ENSCGRG00000004316	Lsm12	95	86.310	ENSVPAG00000011145	LSM12	86	86.310	Vicugna_pacos
ENSCGRG00000004316	Lsm12	95	92.857	ENSVVUG00000017581	LSM12	86	92.857	Vulpes_vulpes
ENSCGRG00000004316	Lsm12	82	65.753	ENSXETG00000003371	lsm12	72	65.753	Xenopus_tropicalis
ENSCGRG00000004316	Lsm12	98	76.437	ENSXCOG00000003994	lsm12b	89	76.437	Xiphophorus_couchianus
ENSCGRG00000004316	Lsm12	98	76.437	ENSXMAG00000020950	lsm12b	89	76.437	Xiphophorus_maculatus