EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000004454 (Gene tree)
Gene ID: -
Gene Symbol: R3hcc1
Alias: 1700020M16Rik
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 7138 bases
Position: chrJH000034.1:2575103-2582240
Accession: 100771057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000006083	R3H	PF01424.22	2.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000006187	-	1440	XM_016978130	ENSCGRP00000006083	479 (aa)	XP_016833619	-

Gene Model

Click here to download ENSCGRG00000004454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004454	R3hcc1	99	64.256	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSCGRG00000004454	R3hcc1	62	44.586	ENSAPOG00000003616	r3hcc1	65	44.304	Acanthochromis_polyacanthus
ENSCGRG00000004454	R3hcc1	99	62.526	ENSAMEG00000002963	R3HCC1	90	62.474	Ailuropoda_melanoleuca
ENSCGRG00000004454	R3hcc1	97	31.148	ENSACIG00000017144	r3hcc1	59	51.724	Amphilophus_citrinellus
ENSCGRG00000004454	R3hcc1	56	42.466	ENSATEG00000023860	r3hcc1	51	63.265	Anabas_testudineus
ENSCGRG00000004454	R3hcc1	99	45.253	ENSACAG00000016627	R3HCC1	74	60.119	Anolis_carolinensis
ENSCGRG00000004454	R3hcc1	99	65.631	ENSANAG00000036169	R3HCC1	95	65.361	Aotus_nancymaae
ENSCGRG00000004454	R3hcc1	99	63.235	ENSBTAG00000025830	R3HCC1	95	63.125	Bos_taurus
ENSCGRG00000004454	R3hcc1	99	63.843	ENSCJAG00000020118	R3HCC1	100	56.584	Callithrix_jacchus
ENSCGRG00000004454	R3hcc1	99	61.378	ENSCAFG00000009210	R3HCC1	94	59.290	Canis_familiaris
ENSCGRG00000004454	R3hcc1	85	58.354	ENSCAFG00020012870	R3HCC1	86	55.690	Canis_lupus_dingo
ENSCGRG00000004454	R3hcc1	99	61.392	ENSCHIG00000009107	R3HCC1	99	61.392	Capra_hircus
ENSCGRG00000004454	R3hcc1	99	65.289	ENSTSYG00000000511	R3HCC1	77	65.909	Carlito_syrichta
ENSCGRG00000004454	R3hcc1	90	57.110	ENSCAPG00000015813	R3HCC1	99	52.000	Cavia_aperea
ENSCGRG00000004454	R3hcc1	99	64.435	ENSCPOG00000009696	R3HCC1	99	59.188	Cavia_porcellus
ENSCGRG00000004454	R3hcc1	99	63.093	ENSCCAG00000037811	R3HCC1	100	56.379	Cebus_capucinus
ENSCGRG00000004454	R3hcc1	99	64.463	ENSCATG00000032971	R3HCC1	98	93.478	Cercocebus_atys
ENSCGRG00000004454	R3hcc1	98	63.214	ENSCLAG00000015556	R3HCC1	83	65.126	Chinchilla_lanigera
ENSCGRG00000004454	R3hcc1	99	64.050	ENSCSAG00000016250	R3HCC1	92	63.992	Chlorocebus_sabaeus
ENSCGRG00000004454	R3hcc1	99	61.392	ENSCHOG00000000396	R3HCC1	95	61.506	Choloepus_hoffmanni
ENSCGRG00000004454	R3hcc1	99	64.948	ENSCANG00000029441	R3HCC1	100	58.111	Colobus_angolensis_palliatus
ENSCGRG00000004454	R3hcc1	100	100.000	ENSCGRG00001014977	R3hcc1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000004454	R3hcc1	96	32.258	ENSCSEG00000005748	r3hcc1	77	47.333	Cynoglossus_semilaevis
ENSCGRG00000004454	R3hcc1	97	31.828	ENSDARG00000099593	r3hcc1	94	40.411	Danio_rerio
ENSCGRG00000004454	R3hcc1	99	63.786	ENSDNOG00000007168	R3HCC1	92	63.786	Dasypus_novemcinctus
ENSCGRG00000004454	R3hcc1	99	65.984	ENSDORG00000026365	R3hcc1	99	65.909	Dipodomys_ordii
ENSCGRG00000004454	R3hcc1	98	56.846	ENSETEG00000001147	R3HCC1	95	56.729	Echinops_telfairi
ENSCGRG00000004454	R3hcc1	99	63.674	ENSEASG00005018782	R3HCC1	79	64.017	Equus_asinus_asinus
ENSCGRG00000004454	R3hcc1	99	63.883	ENSECAG00000025013	R3HCC1	96	63.674	Equus_caballus
ENSCGRG00000004454	R3hcc1	91	33.846	ENSELUG00000023650	r3hcc1	73	47.321	Esox_lucius
ENSCGRG00000004454	R3hcc1	99	64.780	ENSFCAG00000012395	R3HCC1	96	63.750	Felis_catus
ENSCGRG00000004454	R3hcc1	99	63.485	ENSFDAG00000001572	R3HCC1	99	60.870	Fukomys_damarensis
ENSCGRG00000004454	R3hcc1	69	35.632	ENSGMOG00000017590	-	68	44.444	Gadus_morhua
ENSCGRG00000004454	R3hcc1	97	33.613	ENSGAFG00000008747	-	66	46.497	Gambusia_affinis
ENSCGRG00000004454	R3hcc1	74	56.647	ENSGAGG00000018009	R3HCC1	51	61.935	Gopherus_agassizii
ENSCGRG00000004454	R3hcc1	99	58.452	ENSGGOG00000013817	R3HCC1	100	64.256	Gorilla_gorilla
ENSCGRG00000004454	R3hcc1	100	63.430	ENSHGLG00000010517	R3HCC1	92	63.821	Heterocephalus_glaber_female
ENSCGRG00000004454	R3hcc1	100	63.430	ENSHGLG00100006388	R3HCC1	92	63.821	Heterocephalus_glaber_male
ENSCGRG00000004454	R3hcc1	63	43.871	ENSHCOG00000011745	r3hcc1	72	43.871	Hippocampus_comes
ENSCGRG00000004454	R3hcc1	72	39.865	ENSIPUG00000024504	r3hcc1	65	47.260	Ictalurus_punctatus
ENSCGRG00000004454	R3hcc1	77	76.471	ENSSTOG00000027130	R3HCC1	79	76.471	Ictidomys_tridecemlineatus
ENSCGRG00000004454	R3hcc1	99	71.869	ENSJJAG00000013075	R3hcc1	99	73.045	Jaculus_jaculus
ENSCGRG00000004454	R3hcc1	92	31.839	ENSKMAG00000000286	r3hcc1	70	42.405	Kryptolebias_marmoratus
ENSCGRG00000004454	R3hcc1	97	33.190	ENSLOCG00000015442	r3hcc1	71	46.479	Lepisosteus_oculatus
ENSCGRG00000004454	R3hcc1	99	60.400	ENSLAFG00000016137	R3HCC1	95	61.336	Loxodonta_africana
ENSCGRG00000004454	R3hcc1	99	58.266	ENSMFAG00000032894	R3HCC1	98	93.478	Macaca_fascicularis
ENSCGRG00000004454	R3hcc1	99	58.468	ENSMMUG00000016655	R3HCC1	100	57.819	Macaca_mulatta
ENSCGRG00000004454	R3hcc1	99	58.266	ENSMNEG00000043283	R3HCC1	100	57.407	Macaca_nemestrina
ENSCGRG00000004454	R3hcc1	99	64.669	ENSMLEG00000030147	R3HCC1	100	58.058	Mandrillus_leucophaeus
ENSCGRG00000004454	R3hcc1	59	44.375	ENSMAMG00000018146	r3hcc1	69	44.937	Mastacembelus_armatus
ENSCGRG00000004454	R3hcc1	99	37.113	ENSMGAG00000001356	R3HCC1	65	59.877	Meleagris_gallopavo
ENSCGRG00000004454	R3hcc1	100	86.128	ENSMAUG00000016096	R3hcc1	100	84.886	Mesocricetus_auratus
ENSCGRG00000004454	R3hcc1	99	64.596	ENSMICG00000011146	R3HCC1	94	64.596	Microcebus_murinus
ENSCGRG00000004454	R3hcc1	100	84.189	ENSMOCG00000018508	R3hcc1	100	84.394	Microtus_ochrogaster
ENSCGRG00000004454	R3hcc1	97	43.238	ENSMODG00000016809	-	90	69.079	Monodelphis_domestica
ENSCGRG00000004454	R3hcc1	100	80.652	MGP_CAROLIEiJ_G0019467	R3hcc1	100	80.855	Mus_caroli
ENSCGRG00000004454	R3hcc1	100	79.837	ENSMUSG00000034194	R3hcc1	100	79.837	Mus_musculus
ENSCGRG00000004454	R3hcc1	100	77.912	MGP_PahariEiJ_G0030484	R3hcc1	100	79.074	Mus_pahari
ENSCGRG00000004454	R3hcc1	100	79.352	MGP_SPRETEiJ_G0020359	R3hcc1	100	79.352	Mus_spretus
ENSCGRG00000004454	R3hcc1	99	61.875	ENSMPUG00000003457	R3HCC1	86	62.004	Mustela_putorius_furo
ENSCGRG00000004454	R3hcc1	99	59.579	ENSMLUG00000000266	R3HCC1	91	59.916	Myotis_lucifugus
ENSCGRG00000004454	R3hcc1	99	73.085	ENSNGAG00000016747	R3hcc1	99	76.190	Nannospalax_galili
ENSCGRG00000004454	R3hcc1	91	63.636	ENSNLEG00000015944	R3HCC1	85	63.636	Nomascus_leucogenys
ENSCGRG00000004454	R3hcc1	99	50.314	ENSMEUG00000010587	R3HCC1	98	49.272	Notamacropus_eugenii
ENSCGRG00000004454	R3hcc1	98	60.915	ENSODEG00000007529	R3HCC1	99	58.607	Octodon_degus
ENSCGRG00000004454	R3hcc1	61	43.114	ENSORLG00000016816	r3hcc1	72	44.805	Oryzias_latipes
ENSCGRG00000004454	R3hcc1	61	43.114	ENSORLG00020012005	r3hcc1	72	44.805	Oryzias_latipes_hni
ENSCGRG00000004454	R3hcc1	61	43.713	ENSORLG00015007018	r3hcc1	72	45.455	Oryzias_latipes_hsok
ENSCGRG00000004454	R3hcc1	59	40.994	ENSOMEG00000000816	r3hcc1	70	42.759	Oryzias_melastigma
ENSCGRG00000004454	R3hcc1	99	62.213	ENSOARG00000010146	R3HCC1	96	62.762	Ovis_aries
ENSCGRG00000004454	R3hcc1	99	63.768	ENSPPAG00000033165	R3HCC1	100	63.992	Pan_paniscus
ENSCGRG00000004454	R3hcc1	99	64.389	ENSPPRG00000002522	R3HCC1	99	64.182	Panthera_pardus
ENSCGRG00000004454	R3hcc1	92	62.472	ENSPTIG00000011230	R3HCC1	95	60.948	Panthera_tigris_altaica
ENSCGRG00000004454	R3hcc1	99	64.803	ENSPTRG00000020076	R3HCC1	99	59.465	Pan_troglodytes
ENSCGRG00000004454	R3hcc1	99	64.050	ENSPANG00000000453	R3HCC1	98	93.478	Papio_anubis
ENSCGRG00000004454	R3hcc1	57	49.032	ENSPKIG00000020397	-	69	49.032	Paramormyrops_kingsleyae
ENSCGRG00000004454	R3hcc1	57	49.032	ENSPKIG00000014426	-	74	49.032	Paramormyrops_kingsleyae
ENSCGRG00000004454	R3hcc1	100	81.818	ENSPEMG00000007118	R3hcc1	100	85.655	Peromyscus_maniculatus_bairdii
ENSCGRG00000004454	R3hcc1	89	46.667	ENSPCIG00000022718	-	83	44.493	Phascolarctos_cinereus
ENSCGRG00000004454	R3hcc1	96	32.692	ENSPFOG00000022301	r3hcc1	66	44.231	Poecilia_formosa
ENSCGRG00000004454	R3hcc1	96	32.766	ENSPLAG00000010794	r3hcc1	75	44.231	Poecilia_latipinna
ENSCGRG00000004454	R3hcc1	96	32.692	ENSPMEG00000022515	r3hcc1	66	44.231	Poecilia_mexicana
ENSCGRG00000004454	R3hcc1	96	31.760	ENSPREG00000000713	r3hcc1	66	42.949	Poecilia_reticulata
ENSCGRG00000004454	R3hcc1	93	61.693	ENSPPYG00000018436	R3HCC1	100	61.947	Pongo_abelii
ENSCGRG00000004454	R3hcc1	69	80.769	ENSPCAG00000012229	R3HCC1	72	80.769	Procavia_capensis
ENSCGRG00000004454	R3hcc1	99	64.182	ENSPCOG00000027554	R3HCC1	100	63.975	Propithecus_coquereli
ENSCGRG00000004454	R3hcc1	99	63.522	ENSPVAG00000009829	R3HCC1	95	62.893	Pteropus_vampyrus
ENSCGRG00000004454	R3hcc1	60	44.521	ENSPNAG00000023875	r3hcc1	88	44.521	Pygocentrus_nattereri
ENSCGRG00000004454	R3hcc1	100	78.850	ENSRNOG00000016777	AABR07018321.1	82	79.918	Rattus_norvegicus
ENSCGRG00000004454	R3hcc1	99	65.083	ENSRBIG00000028045	R3HCC1	98	93.478	Rhinopithecus_bieti
ENSCGRG00000004454	R3hcc1	99	65.083	ENSRROG00000031126	R3HCC1	98	93.478	Rhinopithecus_roxellana
ENSCGRG00000004454	R3hcc1	99	64.050	ENSSBOG00000022590	R3HCC1	99	64.198	Saimiri_boliviensis_boliviensis
ENSCGRG00000004454	R3hcc1	50	84.524	ENSSHAG00000016526	-	57	79.787	Sarcophilus_harrisii
ENSCGRG00000004454	R3hcc1	92	32.143	ENSSMAG00000008647	r3hcc1	68	45.570	Scophthalmus_maximus
ENSCGRG00000004454	R3hcc1	60	45.455	ENSSDUG00000022786	r3hcc1	68	44.586	Seriola_dumerili
ENSCGRG00000004454	R3hcc1	58	46.667	ENSSPAG00000013497	r3hcc1	68	46.667	Stegastes_partitus
ENSCGRG00000004454	R3hcc1	99	64.523	ENSSSCG00000039915	-	92	64.523	Sus_scrofa
ENSCGRG00000004454	R3hcc1	100	57.700	ENSSSCG00000037347	-	91	58.368	Sus_scrofa
ENSCGRG00000004454	R3hcc1	56	41.667	ENSTRUG00000015880	r3hcc1	66	41.667	Takifugu_rubripes
ENSCGRG00000004454	R3hcc1	98	56.875	ENSTTRG00000012247	R3HCC1	95	56.458	Tursiops_truncatus
ENSCGRG00000004454	R3hcc1	99	62.083	ENSUAMG00000007344	R3HCC1	99	61.250	Ursus_americanus
ENSCGRG00000004454	R3hcc1	99	61.587	ENSVVUG00000005056	R3HCC1	94	61.378	Vulpes_vulpes
ENSCGRG00000004454	R3hcc1	62	42.537	ENSXCOG00000017626	r3hcc1	72	44.937	Xiphophorus_couchianus
ENSCGRG00000004454	R3hcc1	60	45.455	ENSXMAG00000018375	r3hcc1	66	44.586	Xiphophorus_maculatus