EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000004506 (Gene tree)
Gene ID: -
Gene Symbol: Slbp
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 13443 bases
Position: chrJH000454.1:399100-412542
Accession: 100765822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000006149	SLBP_RNA_bind	PF15247.6	5.5e-29	1	1
ENSCGRP00000006150	SLBP_RNA_bind	PF15247.6	5.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000006253	-	2538	XM_003504109	ENSCGRP00000006149	275 (aa)	XP_003504157	UPI00022F5109
ENSCGRT00000006254	-	828	XM_007644625	ENSCGRP00000006150	275 (aa)	XP_007642815	UPI00022F5109

Gene Model

Click here to download ENSCGRG00000004506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004506	Slbp	100	86.545	ENSG00000163950	SLBP	100	85.818	Homo_sapiens
ENSCGRG00000004506	Slbp	85	49.808	ENSAPOG00000004953	slbp	90	50.584	Acanthochromis_polyacanthus
ENSCGRG00000004506	Slbp	79	94.931	ENSAMEG00000016915	SLBP	100	94.931	Ailuropoda_melanoleuca
ENSCGRG00000004506	Slbp	83	53.012	ENSACIG00000022308	slbp	94	51.429	Amphilophus_citrinellus
ENSCGRG00000004506	Slbp	90	50.000	ENSAOCG00000024545	slbp	88	49.430	Amphiprion_ocellaris
ENSCGRG00000004506	Slbp	85	50.575	ENSAPEG00000017629	slbp	94	47.703	Amphiprion_percula
ENSCGRG00000004506	Slbp	85	50.763	ENSATEG00000016358	slbp	74	57.820	Anabas_testudineus
ENSCGRG00000004506	Slbp	79	75.455	ENSAPLG00000015989	-	100	79.545	Anas_platyrhynchos
ENSCGRG00000004506	Slbp	100	83.688	ENSANAG00000034769	SLBP	100	82.979	Aotus_nancymaae
ENSCGRG00000004506	Slbp	82	52.191	ENSACLG00000007036	-	78	51.613	Astatotilapia_calliptera
ENSCGRG00000004506	Slbp	84	56.452	ENSAMXG00000014527	slbp	77	63.333	Astyanax_mexicanus
ENSCGRG00000004506	Slbp	100	85.455	ENSBTAG00000001328	SLBP	100	85.455	Bos_taurus
ENSCGRG00000004506	Slbp	100	82.270	ENSCJAG00000001790	SLBP	100	82.270	Callithrix_jacchus
ENSCGRG00000004506	Slbp	100	86.182	ENSCAFG00000015016	SLBP	100	86.182	Canis_familiaris
ENSCGRG00000004506	Slbp	100	86.182	ENSCAFG00020012334	SLBP	100	86.182	Canis_lupus_dingo
ENSCGRG00000004506	Slbp	100	85.091	ENSCHIG00000019364	SLBP	100	85.091	Capra_hircus
ENSCGRG00000004506	Slbp	100	87.636	ENSTSYG00000000376	SLBP	100	86.545	Carlito_syrichta
ENSCGRG00000004506	Slbp	66	90.055	ENSCAPG00000016340	SLBP	100	90.055	Cavia_aperea
ENSCGRG00000004506	Slbp	100	85.305	ENSCPOG00000000031	SLBP	100	85.305	Cavia_porcellus
ENSCGRG00000004506	Slbp	62	84.762	ENSCCAG00000026134	SLBP	85	82.857	Cebus_capucinus
ENSCGRG00000004506	Slbp	100	86.545	ENSCATG00000029173	SLBP	100	85.818	Cercocebus_atys
ENSCGRG00000004506	Slbp	100	85.091	ENSCLAG00000008157	SLBP	100	85.145	Chinchilla_lanigera
ENSCGRG00000004506	Slbp	100	72.500	ENSCSAG00000015628	SLBP	100	72.500	Chlorocebus_sabaeus
ENSCGRG00000004506	Slbp	100	69.858	ENSCPBG00000000746	SLBP	100	71.986	Chrysemys_picta_bellii
ENSCGRG00000004506	Slbp	79	89.815	ENSCANG00000041008	SLBP	100	88.889	Colobus_angolensis_palliatus
ENSCGRG00000004506	Slbp	100	100.000	ENSCGRG00001009760	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000004506	Slbp	100	96.000	ENSCGRG00001012991	-	100	96.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000004506	Slbp	83	51.793	ENSCSEG00000020337	-	81	54.667	Cynoglossus_semilaevis
ENSCGRG00000004506	Slbp	83	49.200	ENSCVAG00000019592	-	76	55.610	Cyprinodon_variegatus
ENSCGRG00000004506	Slbp	84	56.098	ENSDARG00000100558	slbp	67	62.069	Danio_rerio
ENSCGRG00000004506	Slbp	100	78.445	ENSDNOG00000047539	SLBP	100	79.152	Dasypus_novemcinctus
ENSCGRG00000004506	Slbp	79	92.130	ENSDORG00000003028	Slbp	100	92.130	Dipodomys_ordii
ENSCGRG00000004506	Slbp	86	80.335	ENSETEG00000004641	SLBP	99	80.335	Echinops_telfairi
ENSCGRG00000004506	Slbp	70	93.229	ENSEASG00005022714	SLBP	100	93.229	Equus_asinus_asinus
ENSCGRG00000004506	Slbp	87	80.335	ENSECAG00000011689	SLBP	69	89.524	Equus_caballus
ENSCGRG00000004506	Slbp	87	51.515	ENSELUG00000012854	slbp	92	49.042	Esox_lucius
ENSCGRG00000004506	Slbp	100	87.636	ENSFCAG00000000169	SLBP	100	87.636	Felis_catus
ENSCGRG00000004506	Slbp	100	69.395	ENSFALG00000010003	-	100	69.039	Ficedula_albicollis
ENSCGRG00000004506	Slbp	92	90.119	ENSFDAG00000007592	SLBP	99	90.119	Fukomys_damarensis
ENSCGRG00000004506	Slbp	82	50.607	ENSFHEG00000007497	slbp	80	50.463	Fundulus_heteroclitus
ENSCGRG00000004506	Slbp	53	71.333	ENSGMOG00000015352	slbp	96	71.333	Gadus_morhua
ENSCGRG00000004506	Slbp	100	69.039	ENSGALG00000015712	SLBP	100	71.174	Gallus_gallus
ENSCGRG00000004506	Slbp	85	51.538	ENSGAFG00000019577	slbp	85	54.505	Gambusia_affinis
ENSCGRG00000004506	Slbp	86	49.398	ENSGACG00000019596	slbp	82	55.392	Gasterosteus_aculeatus
ENSCGRG00000004506	Slbp	86	68.443	ENSGAGG00000012096	SLBP	91	72.247	Gopherus_agassizii
ENSCGRG00000004506	Slbp	100	86.545	ENSGGOG00000003167	SLBP	100	85.818	Gorilla_gorilla
ENSCGRG00000004506	Slbp	82	51.969	ENSHBUG00000003338	-	78	51.613	Haplochromis_burtoni
ENSCGRG00000004506	Slbp	85	80.342	ENSHGLG00000010461	-	96	80.567	Heterocephalus_glaber_female
ENSCGRG00000004506	Slbp	90	78.226	ENSHGLG00000008313	-	100	73.818	Heterocephalus_glaber_female
ENSCGRG00000004506	Slbp	100	76.364	ENSHGLG00000005955	-	100	76.364	Heterocephalus_glaber_female
ENSCGRG00000004506	Slbp	100	87.636	ENSHGLG00100014018	-	100	87.636	Heterocephalus_glaber_male
ENSCGRG00000004506	Slbp	85	80.342	ENSHGLG00100014906	-	96	80.567	Heterocephalus_glaber_male
ENSCGRG00000004506	Slbp	90	79.032	ENSHGLG00100010510	-	100	74.545	Heterocephalus_glaber_male
ENSCGRG00000004506	Slbp	89	47.925	ENSHCOG00000013425	slbp	80	52.273	Hippocampus_comes
ENSCGRG00000004506	Slbp	70	67.172	ENSIPUG00000016780	slbp	74	67.172	Ictalurus_punctatus
ENSCGRG00000004506	Slbp	100	90.909	ENSSTOG00000003262	SLBP	100	90.909	Ictidomys_tridecemlineatus
ENSCGRG00000004506	Slbp	100	90.545	ENSJJAG00000002394	-	100	90.545	Jaculus_jaculus
ENSCGRG00000004506	Slbp	100	92.000	ENSJJAG00000020549	-	100	92.000	Jaculus_jaculus
ENSCGRG00000004506	Slbp	86	50.373	ENSKMAG00000008187	slbp	83	52.790	Kryptolebias_marmoratus
ENSCGRG00000004506	Slbp	84	51.765	ENSLBEG00000024709	slbp	76	53.333	Labrus_bergylta
ENSCGRG00000004506	Slbp	95	56.250	ENSLACG00000014623	SLBP	96	55.882	Latimeria_chalumnae
ENSCGRG00000004506	Slbp	100	49.498	ENSLOCG00000011027	slbp	99	49.498	Lepisosteus_oculatus
ENSCGRG00000004506	Slbp	85	86.266	ENSLAFG00000012933	SLBP	100	85.185	Loxodonta_africana
ENSCGRG00000004506	Slbp	91	88.048	ENSMFAG00000030130	SLBP	81	86.719	Macaca_fascicularis
ENSCGRG00000004506	Slbp	96	83.026	ENSMMUG00000032303	SLBP	96	89.401	Macaca_mulatta
ENSCGRG00000004506	Slbp	100	67.376	ENSMNEG00000008082	SLBP	100	66.667	Macaca_nemestrina
ENSCGRG00000004506	Slbp	93	80.000	ENSMLEG00000024639	SLBP	98	79.216	Mandrillus_leucophaeus
ENSCGRG00000004506	Slbp	85	47.490	ENSMAMG00000001046	-	90	47.656	Mastacembelus_armatus
ENSCGRG00000004506	Slbp	82	51.969	ENSMZEG00005017261	-	78	51.613	Maylandia_zebra
ENSCGRG00000004506	Slbp	79	76.498	ENSMGAG00000013085	SLBP	100	79.263	Meleagris_gallopavo
ENSCGRG00000004506	Slbp	100	98.545	ENSMAUG00000009490	Slbp	100	98.545	Mesocricetus_auratus
ENSCGRG00000004506	Slbp	100	86.545	ENSMICG00000014244	SLBP	100	85.455	Microcebus_murinus
ENSCGRG00000004506	Slbp	100	96.727	ENSMOCG00000015826	Slbp	99	96.727	Microtus_ochrogaster
ENSCGRG00000004506	Slbp	85	50.633	ENSMMOG00000010181	slbp	93	50.424	Mola_mola
ENSCGRG00000004506	Slbp	92	82.171	ENSMODG00000004304	SLBP	99	82.171	Monodelphis_domestica
ENSCGRG00000004506	Slbp	84	48.077	ENSMALG00000013883	-	54	55.502	Monopterus_albus
ENSCGRG00000004506	Slbp	100	95.273	MGP_CAROLIEiJ_G0027117	Slbp	100	95.273	Mus_caroli
ENSCGRG00000004506	Slbp	100	95.636	ENSMUSG00000004642	Slbp	100	95.636	Mus_musculus
ENSCGRG00000004506	Slbp	100	95.636	MGP_PahariEiJ_G0016901	Slbp	100	95.636	Mus_pahari
ENSCGRG00000004506	Slbp	100	95.636	MGP_SPRETEiJ_G0028113	Slbp	100	95.636	Mus_spretus
ENSCGRG00000004506	Slbp	67	92.391	ENSMPUG00000011139	SLBP	94	92.391	Mustela_putorius_furo
ENSCGRG00000004506	Slbp	79	88.532	ENSMLUG00000004425	SLBP	93	88.532	Myotis_lucifugus
ENSCGRG00000004506	Slbp	100	89.455	ENSNGAG00000020799	Slbp	100	89.455	Nannospalax_galili
ENSCGRG00000004506	Slbp	81	52.459	ENSNBRG00000006044	-	85	53.448	Neolamprologus_brichardi
ENSCGRG00000004506	Slbp	100	84.397	ENSNLEG00000000048	SLBP	100	83.688	Nomascus_leucogenys
ENSCGRG00000004506	Slbp	65	88.202	ENSMEUG00000002501	SLBP	100	88.202	Notamacropus_eugenii
ENSCGRG00000004506	Slbp	100	85.455	ENSODEG00000012641	SLBP	100	85.455	Octodon_degus
ENSCGRG00000004506	Slbp	82	52.362	ENSONIG00000017469	-	78	52.074	Oreochromis_niloticus
ENSCGRG00000004506	Slbp	79	82.949	ENSOANG00000014243	SLBP	95	85.714	Ornithorhynchus_anatinus
ENSCGRG00000004506	Slbp	84	51.440	ENSORLG00000024887	-	88	48.319	Oryzias_latipes
ENSCGRG00000004506	Slbp	84	51.029	ENSORLG00020007798	slbp	75	53.431	Oryzias_latipes_hni
ENSCGRG00000004506	Slbp	84	51.852	ENSORLG00015016656	slbp	73	54.545	Oryzias_latipes_hsok
ENSCGRG00000004506	Slbp	84	51.029	ENSOMEG00000010818	slbp	73	55.779	Oryzias_melastigma
ENSCGRG00000004506	Slbp	100	85.818	ENSOGAG00000009750	SLBP	100	85.091	Otolemur_garnettii
ENSCGRG00000004506	Slbp	79	91.705	ENSOARG00000016090	SLBP	100	91.705	Ovis_aries
ENSCGRG00000004506	Slbp	100	86.909	ENSPPAG00000033300	SLBP	100	86.182	Pan_paniscus
ENSCGRG00000004506	Slbp	91	90.000	ENSPPRG00000016897	SLBP	100	90.000	Panthera_pardus
ENSCGRG00000004506	Slbp	70	93.229	ENSPTIG00000015057	SLBP	100	93.229	Panthera_tigris_altaica
ENSCGRG00000004506	Slbp	100	86.545	ENSPTRG00000015832	SLBP	100	85.818	Pan_troglodytes
ENSCGRG00000004506	Slbp	100	82.746	ENSPANG00000004932	SLBP	100	82.042	Papio_anubis
ENSCGRG00000004506	Slbp	88	53.257	ENSPKIG00000006183	slbp	94	51.282	Paramormyrops_kingsleyae
ENSCGRG00000004506	Slbp	80	51.542	ENSPMGG00000017684	-	88	59.887	Periophthalmus_magnuspinnatus
ENSCGRG00000004506	Slbp	100	97.455	ENSPEMG00000018369	Slbp	100	97.455	Peromyscus_maniculatus_bairdii
ENSCGRG00000004506	Slbp	100	75.083	ENSPCIG00000013575	SLBP	86	75.083	Phascolarctos_cinereus
ENSCGRG00000004506	Slbp	85	50.965	ENSPFOG00000000462	slbp	80	54.505	Poecilia_formosa
ENSCGRG00000004506	Slbp	85	51.351	ENSPLAG00000008300	slbp	85	52.444	Poecilia_latipinna
ENSCGRG00000004506	Slbp	85	50.965	ENSPMEG00000020807	slbp	80	54.505	Poecilia_mexicana
ENSCGRG00000004506	Slbp	85	50.965	ENSPREG00000004561	slbp	80	54.505	Poecilia_reticulata
ENSCGRG00000004506	Slbp	100	86.909	ENSPPYG00000014529	SLBP	100	86.182	Pongo_abelii
ENSCGRG00000004506	Slbp	100	87.273	ENSPCOG00000017399	SLBP	100	86.182	Propithecus_coquereli
ENSCGRG00000004506	Slbp	100	80.364	ENSPVAG00000002807	SLBP	100	80.364	Pteropus_vampyrus
ENSCGRG00000004506	Slbp	82	51.969	ENSPNYG00000005451	-	78	51.613	Pundamilia_nyererei
ENSCGRG00000004506	Slbp	82	58.750	ENSPNAG00000018503	slbp	89	58.750	Pygocentrus_nattereri
ENSCGRG00000004506	Slbp	100	95.273	ENSRNOG00000037162	Slbp	100	95.273	Rattus_norvegicus
ENSCGRG00000004506	Slbp	100	86.545	ENSRBIG00000039159	SLBP	100	85.818	Rhinopithecus_bieti
ENSCGRG00000004506	Slbp	96	86.364	ENSRROG00000030081	SLBP	97	85.606	Rhinopithecus_roxellana
ENSCGRG00000004506	Slbp	70	89.583	ENSSBOG00000033897	SLBP	100	88.542	Saimiri_boliviensis_boliviensis
ENSCGRG00000004506	Slbp	100	74.247	ENSSHAG00000013939	SLBP	100	74.247	Sarcophilus_harrisii
ENSCGRG00000004506	Slbp	91	54.909	ENSSFOG00015019429	slbp	98	51.825	Scleropages_formosus
ENSCGRG00000004506	Slbp	73	51.802	ENSSMAG00000016028	-	77	52.055	Scophthalmus_maximus
ENSCGRG00000004506	Slbp	82	50.800	ENSSDUG00000000855	-	77	55.399	Seriola_dumerili
ENSCGRG00000004506	Slbp	50	53.333	ENSSLDG00000022893	-	89	52.980	Seriola_lalandi_dorsalis
ENSCGRG00000004506	Slbp	72	39.151	ENSSLDG00000007554	-	66	37.736	Seriola_lalandi_dorsalis
ENSCGRG00000004506	Slbp	92	69.412	ENSSPUG00000016007	SLBP	98	67.537	Sphenodon_punctatus
ENSCGRG00000004506	Slbp	82	51.190	ENSSPAG00000004021	slbp	81	56.938	Stegastes_partitus
ENSCGRG00000004506	Slbp	100	84.000	ENSSSCG00000008676	SLBP	100	84.000	Sus_scrofa
ENSCGRG00000004506	Slbp	93	69.349	ENSTGUG00000010626	-	100	71.264	Taeniopygia_guttata
ENSCGRG00000004506	Slbp	91	50.554	ENSTRUG00000000688	slbp	97	48.689	Takifugu_rubripes
ENSCGRG00000004506	Slbp	88	46.923	ENSTNIG00000000484	-	82	49.091	Tetraodon_nigroviridis
ENSCGRG00000004506	Slbp	92	68.110	ENSTBEG00000004085	SLBP	100	68.110	Tupaia_belangeri
ENSCGRG00000004506	Slbp	79	93.981	ENSTTRG00000010901	-	100	93.981	Tursiops_truncatus
ENSCGRG00000004506	Slbp	65	88.764	ENSTTRG00000004010	-	100	88.764	Tursiops_truncatus
ENSCGRG00000004506	Slbp	100	87.365	ENSUAMG00000012990	SLBP	100	87.365	Ursus_americanus
ENSCGRG00000004506	Slbp	70	93.229	ENSUMAG00000006119	SLBP	100	93.229	Ursus_maritimus
ENSCGRG00000004506	Slbp	100	85.455	ENSVVUG00000015578	-	100	85.455	Vulpes_vulpes
ENSCGRG00000004506	Slbp	94	55.094	ENSXETG00000003876	slbp	95	57.895	Xenopus_tropicalis
ENSCGRG00000004506	Slbp	76	54.185	ENSXCOG00000008275	slbp	85	54.464	Xiphophorus_couchianus
ENSCGRG00000004506	Slbp	85	50.965	ENSXMAG00000001331	-	79	54.505	Xiphophorus_maculatus