EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000004563 (Gene tree)
Gene ID: -
Gene Symbol: Ybx3
Alias: Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 16928 bases
Position: chrJH001324.1:226098-243025
Accession: 100774412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000006238	CSD	PF00313.22	6.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000006342	-	888	XM_007651174	ENSCGRP00000006238	295 (aa)	XP_007649364	-

Gene Model

Click here to download ENSCGRG00000004563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000004563	Ybx3	97	49.671	ENSCGRG00000001303	-	100	55.749

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004563	Ybx3	98	89.384	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSCGRG00000004563	Ybx3	98	92.440	ENSAMEG00000009393	YBX3	81	92.440	Ailuropoda_melanoleuca
ENSCGRG00000004563	Ybx3	97	67.241	ENSAPLG00000003147	YBX3	100	67.241	Anas_platyrhynchos
ENSCGRG00000004563	Ybx3	98	89.726	ENSANAG00000024492	-	91	91.096	Aotus_nancymaae
ENSCGRG00000004563	Ybx3	98	89.691	ENSBTAG00000009663	YBX3	76	87.629	Bos_taurus
ENSCGRG00000004563	Ybx3	98	89.384	ENSCJAG00000021660	-	78	90.753	Callithrix_jacchus
ENSCGRG00000004563	Ybx3	69	82.353	ENSCJAG00000033824	-	78	83.544	Callithrix_jacchus
ENSCGRG00000004563	Ybx3	99	91.156	ENSCAFG00000013401	YBX3	86	91.336	Canis_familiaris
ENSCGRG00000004563	Ybx3	98	89.347	ENSCAFG00020006412	YBX3	76	89.347	Canis_lupus_dingo
ENSCGRG00000004563	Ybx3	98	89.691	ENSCHIG00000010863	YBX3	80	89.691	Capra_hircus
ENSCGRG00000004563	Ybx3	98	57.439	ENSTSYG00000035821	-	70	91.398	Carlito_syrichta
ENSCGRG00000004563	Ybx3	100	91.275	ENSTSYG00000004204	-	90	92.617	Carlito_syrichta
ENSCGRG00000004563	Ybx3	99	87.119	ENSCAPG00000015039	YBX3	94	87.119	Cavia_aperea
ENSCGRG00000004563	Ybx3	98	87.629	ENSCPOG00000011329	YBX3	84	87.629	Cavia_porcellus
ENSCGRG00000004563	Ybx3	98	89.041	ENSCCAG00000016469	YBX3	77	90.411	Cebus_capucinus
ENSCGRG00000004563	Ybx3	98	88.699	ENSCATG00000034411	YBX3	77	90.068	Cercocebus_atys
ENSCGRG00000004563	Ybx3	99	88.475	ENSCLAG00000016030	YBX3	95	88.475	Chinchilla_lanigera
ENSCGRG00000004563	Ybx3	98	89.041	ENSCSAG00000008744	YBX3	77	90.411	Chlorocebus_sabaeus
ENSCGRG00000004563	Ybx3	75	95.495	ENSCHOG00000011988	YBX3	59	95.495	Choloepus_hoffmanni
ENSCGRG00000004563	Ybx3	98	78.425	ENSCPBG00000014147	YBX3	72	94.949	Chrysemys_picta_bellii
ENSCGRG00000004563	Ybx3	98	89.041	ENSCANG00000036801	YBX3	91	90.411	Colobus_angolensis_palliatus
ENSCGRG00000004563	Ybx3	98	98.270	ENSCGRG00001016148	Ybx3	79	98.270	Cricetulus_griseus_chok1gshd
ENSCGRG00000004563	Ybx3	97	90.311	ENSDORG00000009103	Ybx3	82	89.865	Dipodomys_ordii
ENSCGRG00000004563	Ybx3	97	82.818	ENSETEG00000002557	YBX3	99	81.315	Echinops_telfairi
ENSCGRG00000004563	Ybx3	98	86.598	ENSEASG00005014726	YBX3	76	86.598	Equus_asinus_asinus
ENSCGRG00000004563	Ybx3	98	90.378	ENSECAG00000013777	YBX3	77	90.378	Equus_caballus
ENSCGRG00000004563	Ybx3	97	88.927	ENSEEUG00000010415	YBX3	100	90.311	Erinaceus_europaeus
ENSCGRG00000004563	Ybx3	98	90.068	ENSFCAG00000027748	YBX3	77	91.438	Felis_catus
ENSCGRG00000004563	Ybx3	97	63.230	ENSFALG00000003661	YBX3	100	60.410	Ficedula_albicollis
ENSCGRG00000004563	Ybx3	99	84.407	ENSFDAG00000021192	YBX3	93	84.407	Fukomys_damarensis
ENSCGRG00000004563	Ybx3	98	59.862	ENSGALG00000031890	YBX3	74	52.365	Gallus_gallus
ENSCGRG00000004563	Ybx3	98	74.403	ENSGAGG00000017780	YBX3	73	95.192	Gopherus_agassizii
ENSCGRG00000004563	Ybx3	98	89.384	ENSGGOG00000001352	YBX3	77	90.753	Gorilla_gorilla
ENSCGRG00000004563	Ybx3	98	77.133	ENSHGLG00000014798	-	85	79.252	Heterocephalus_glaber_female
ENSCGRG00000004563	Ybx3	91	78.439	ENSHGLG00000015495	-	78	78.439	Heterocephalus_glaber_female
ENSCGRG00000004563	Ybx3	82	87.500	ENSHGLG00100003589	YBX3	89	62.838	Heterocephalus_glaber_male
ENSCGRG00000004563	Ybx3	98	86.254	ENSSTOG00000032577	-	81	86.254	Ictidomys_tridecemlineatus
ENSCGRG00000004563	Ybx3	100	85.424	ENSSTOG00000002108	-	90	85.424	Ictidomys_tridecemlineatus
ENSCGRG00000004563	Ybx3	98	69.072	ENSJJAG00000014239	Ybx3	92	80.000	Jaculus_jaculus
ENSCGRG00000004563	Ybx3	98	92.096	ENSLAFG00000017247	YBX3	85	86.942	Loxodonta_africana
ENSCGRG00000004563	Ybx3	98	89.041	ENSMFAG00000039369	YBX3	77	90.411	Macaca_fascicularis
ENSCGRG00000004563	Ybx3	98	89.041	ENSMMUG00000022469	YBX3	88	90.411	Macaca_mulatta
ENSCGRG00000004563	Ybx3	98	89.041	ENSMNEG00000045109	YBX3	77	90.411	Macaca_nemestrina
ENSCGRG00000004563	Ybx3	100	89.899	ENSMLEG00000033618	YBX3	83	89.899	Mandrillus_leucophaeus
ENSCGRG00000004563	Ybx3	98	65.517	ENSMGAG00000014224	YBX3	98	94.175	Meleagris_gallopavo
ENSCGRG00000004563	Ybx3	98	97.924	ENSMAUG00000012185	Ybx3	89	97.924	Mesocricetus_auratus
ENSCGRG00000004563	Ybx3	98	64.014	ENSMICG00000031459	-	76	64.014	Microcebus_murinus
ENSCGRG00000004563	Ybx3	98	93.127	ENSMICG00000038002	-	77	93.127	Microcebus_murinus
ENSCGRG00000004563	Ybx3	98	97.578	ENSMOCG00000016291	Ybx3	93	97.578	Microtus_ochrogaster
ENSCGRG00000004563	Ybx3	98	83.162	ENSMODG00000018248	YBX3	91	83.162	Monodelphis_domestica
ENSCGRG00000004563	Ybx3	98	96.194	MGP_CAROLIEiJ_G0028947	Ybx3	79	96.194	Mus_caroli
ENSCGRG00000004563	Ybx3	98	96.194	ENSMUSG00000030189	Ybx3	79	96.194	Mus_musculus
ENSCGRG00000004563	Ybx3	98	96.886	MGP_PahariEiJ_G0022709	Ybx3	79	96.886	Mus_pahari
ENSCGRG00000004563	Ybx3	98	96.540	MGP_SPRETEiJ_G0029994	Ybx3	79	96.540	Mus_spretus
ENSCGRG00000004563	Ybx3	98	72.333	ENSMPUG00000011810	YBX3	78	74.333	Mustela_putorius_furo
ENSCGRG00000004563	Ybx3	88	90.637	ENSMLUG00000007476	YBX3	99	90.637	Myotis_lucifugus
ENSCGRG00000004563	Ybx3	97	89.547	ENSNGAG00000000710	Ybx3	88	64.460	Nannospalax_galili
ENSCGRG00000004563	Ybx3	98	86.644	ENSNLEG00000034844	YBX3	81	86.644	Nomascus_leucogenys
ENSCGRG00000004563	Ybx3	60	75.843	ENSMEUG00000002507	-	81	76.404	Notamacropus_eugenii
ENSCGRG00000004563	Ybx3	98	83.849	ENSODEG00000017957	YBX3	84	83.849	Octodon_degus
ENSCGRG00000004563	Ybx3	98	86.942	ENSOCUG00000001889	YBX3	83	86.942	Oryctolagus_cuniculus
ENSCGRG00000004563	Ybx3	98	90.236	ENSOGAG00000013245	YBX3	78	90.236	Otolemur_garnettii
ENSCGRG00000004563	Ybx3	98	78.644	ENSOARG00000020919	YBX3	97	80.000	Ovis_aries
ENSCGRG00000004563	Ybx3	98	89.384	ENSPPAG00000039068	YBX3	80	90.753	Pan_paniscus
ENSCGRG00000004563	Ybx3	98	90.411	ENSPPRG00000005859	YBX3	77	91.781	Panthera_pardus
ENSCGRG00000004563	Ybx3	97	92.042	ENSPTIG00000005322	YBX3	83	91.246	Panthera_tigris_altaica
ENSCGRG00000004563	Ybx3	98	89.384	ENSPTRG00000004681	YBX3	77	90.753	Pan_troglodytes
ENSCGRG00000004563	Ybx3	98	88.699	ENSPANG00000010280	YBX3	77	90.068	Papio_anubis
ENSCGRG00000004563	Ybx3	98	97.232	ENSPEMG00000012132	-	90	97.232	Peromyscus_maniculatus_bairdii
ENSCGRG00000004563	Ybx3	80	97.248	ENSPEMG00000010391	-	82	70.934	Peromyscus_maniculatus_bairdii
ENSCGRG00000004563	Ybx3	87	81.853	ENSPCIG00000029949	YBX3	100	81.853	Phascolarctos_cinereus
ENSCGRG00000004563	Ybx3	98	89.041	ENSPPYG00000004279	YBX3	77	90.411	Pongo_abelii
ENSCGRG00000004563	Ybx3	71	91.509	ENSPCAG00000001397	YBX3	72	91.509	Procavia_capensis
ENSCGRG00000004563	Ybx3	61	89.444	ENSPCOG00000011663	YBX3	67	89.444	Propithecus_coquereli
ENSCGRG00000004563	Ybx3	98	76.712	ENSPVAG00000006740	YBX3	77	76.712	Pteropus_vampyrus
ENSCGRG00000004563	Ybx3	98	97.232	ENSRNOG00000005480	Ybx3	79	97.232	Rattus_norvegicus
ENSCGRG00000004563	Ybx3	98	89.041	ENSRBIG00000039208	YBX3	77	90.411	Rhinopithecus_bieti
ENSCGRG00000004563	Ybx3	98	89.041	ENSRROG00000029638	YBX3	77	90.411	Rhinopithecus_roxellana
ENSCGRG00000004563	Ybx3	100	90.572	ENSSBOG00000030573	YBX3	85	90.572	Saimiri_boliviensis_boliviensis
ENSCGRG00000004563	Ybx3	97	80.068	ENSSHAG00000003262	YBX3	98	81.419	Sarcophilus_harrisii
ENSCGRG00000004563	Ybx3	62	72.727	ENSSPUG00000009911	-	60	94.898	Sphenodon_punctatus
ENSCGRG00000004563	Ybx3	98	90.753	ENSSSCG00000000633	YBX3	75	92.123	Sus_scrofa
ENSCGRG00000004563	Ybx3	97	65.517	ENSTGUG00000012047	YBX3	100	64.828	Taeniopygia_guttata
ENSCGRG00000004563	Ybx3	98	91.438	ENSTBEG00000012570	YBX3	79	92.808	Tupaia_belangeri
ENSCGRG00000004563	Ybx3	88	82.707	ENSTTRG00000008045	YBX3	100	83.835	Tursiops_truncatus
ENSCGRG00000004563	Ybx3	95	89.007	ENSUAMG00000016662	YBX3	100	89.007	Ursus_americanus
ENSCGRG00000004563	Ybx3	97	92.042	ENSUMAG00000016118	YBX3	96	91.246	Ursus_maritimus
ENSCGRG00000004563	Ybx3	97	66.090	ENSVPAG00000000876	YBX3	100	69.550	Vicugna_pacos
ENSCGRG00000004563	Ybx3	95	88.652	ENSVVUG00000004956	YBX3	100	88.652	Vulpes_vulpes
ENSCGRG00000004563	Ybx3	89	69.182	ENSXETG00000016239	ybx3	90	56.436	Xenopus_tropicalis