EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000004756 (Gene tree)
Gene ID: -
Gene Symbol: Sbno1
Alias: 9330180L10Rik|sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 39611 bases
Position: chrJH001273.1:101719-141329
Accession: 100774701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000006506	ResIII	PF04851.15	6.1e-08	1	1
ENSCGRP00000006505	ResIII	PF04851.15	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000006615	-	3810	-	ENSCGRP00000006506	1269 (aa)	-	-
ENSCGRT00000006614	-	8502	XM_007650903	ENSCGRP00000006505	1392 (aa)	XP_007649093	UPI00022F621B

Gene Model

Click here to download ENSCGRG00000004756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000004756	Sbno1	82	56.857	ENSCGRG00000011984	Sbno2	70	67.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004756	Sbno1	99	98.373	ENSG00000139697	SBNO1	100	97.200	Homo_sapiens
ENSCGRG00000004756	Sbno1	84	81.996	ENSAPOG00000003196	sbno1	98	80.584	Acanthochromis_polyacanthus
ENSCGRG00000004756	Sbno1	100	97.421	ENSAMEG00000015151	SBNO1	100	97.421	Ailuropoda_melanoleuca
ENSCGRG00000004756	Sbno1	99	80.736	ENSACIG00000008088	sbno1	95	80.736	Amphilophus_citrinellus
ENSCGRG00000004756	Sbno1	99	81.283	ENSAOCG00000014859	sbno1	99	74.596	Amphiprion_ocellaris
ENSCGRG00000004756	Sbno1	99	81.283	ENSAPEG00000006069	sbno1	99	74.596	Amphiprion_percula
ENSCGRG00000004756	Sbno1	99	83.604	ENSATEG00000006667	sbno1	95	83.604	Anabas_testudineus
ENSCGRG00000004756	Sbno1	99	93.852	ENSAPLG00000015674	SBNO1	100	91.463	Anas_platyrhynchos
ENSCGRG00000004756	Sbno1	100	92.473	ENSACAG00000015441	SBNO1	84	92.806	Anolis_carolinensis
ENSCGRG00000004756	Sbno1	100	96.841	ENSANAG00000029958	-	100	96.841	Aotus_nancymaae
ENSCGRG00000004756	Sbno1	99	73.767	ENSACLG00000024913	sbno1	100	73.860	Astatotilapia_calliptera
ENSCGRG00000004756	Sbno1	99	85.612	ENSAMXG00000019473	sbno1	95	85.612	Astyanax_mexicanus
ENSCGRG00000004756	Sbno1	100	97.344	ENSBTAG00000020505	SBNO1	100	97.344	Bos_taurus
ENSCGRG00000004756	Sbno1	99	98.192	ENSCJAG00000016599	SBNO1	100	96.985	Callithrix_jacchus
ENSCGRG00000004756	Sbno1	100	97.204	ENSCAFG00000007503	SBNO1	100	97.204	Canis_familiaris
ENSCGRG00000004756	Sbno1	100	97.087	ENSCAFG00020015363	SBNO1	100	97.087	Canis_lupus_dingo
ENSCGRG00000004756	Sbno1	100	97.717	ENSCHIG00000008382	SBNO1	100	97.717	Capra_hircus
ENSCGRG00000004756	Sbno1	100	97.703	ENSTSYG00000012749	SBNO1	100	97.703	Carlito_syrichta
ENSCGRG00000004756	Sbno1	97	98.011	ENSCAPG00000000384	SBNO1	99	97.879	Cavia_aperea
ENSCGRG00000004756	Sbno1	100	97.323	ENSCPOG00000008109	SBNO1	100	97.323	Cavia_porcellus
ENSCGRG00000004756	Sbno1	99	94.134	ENSCCAG00000035316	SBNO1	100	92.611	Cebus_capucinus
ENSCGRG00000004756	Sbno1	99	98.373	ENSCATG00000008239	SBNO1	99	97.492	Cercocebus_atys
ENSCGRG00000004756	Sbno1	100	97.402	ENSCLAG00000008995	SBNO1	100	97.402	Chinchilla_lanigera
ENSCGRG00000004756	Sbno1	84	97.331	ENSCSAG00000002064	SBNO1	100	98.273	Chlorocebus_sabaeus
ENSCGRG00000004756	Sbno1	95	95.122	ENSCHOG00000008814	SBNO1	96	93.558	Choloepus_hoffmanni
ENSCGRG00000004756	Sbno1	100	93.369	ENSCPBG00000025968	SBNO1	99	91.457	Chrysemys_picta_bellii
ENSCGRG00000004756	Sbno1	100	91.971	ENSCANG00000042688	-	100	91.900	Colobus_angolensis_palliatus
ENSCGRG00000004756	Sbno1	100	100.000	ENSCGRG00001017470	Sbno1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000004756	Sbno1	99	81.362	ENSCSEG00000011919	sbno1	96	81.105	Cynoglossus_semilaevis
ENSCGRG00000004756	Sbno1	99	82.079	ENSCVAG00000007038	sbno1	95	82.079	Cyprinodon_variegatus
ENSCGRG00000004756	Sbno1	99	85.172	ENSDARG00000099080	sbno1	95	85.172	Danio_rerio
ENSCGRG00000004756	Sbno1	100	96.404	ENSDNOG00000017147	SBNO1	98	97.122	Dasypus_novemcinctus
ENSCGRG00000004756	Sbno1	100	96.797	ENSDORG00000015261	Sbno1	95	96.797	Dipodomys_ordii
ENSCGRG00000004756	Sbno1	92	95.652	ENSETEG00000005620	SBNO1	93	90.282	Echinops_telfairi
ENSCGRG00000004756	Sbno1	72	84.772	ENSEBUG00000013823	sbno1	85	84.772	Eptatretus_burgeri
ENSCGRG00000004756	Sbno1	54	94.905	ENSEASG00005012595	-	91	97.160	Equus_asinus_asinus
ENSCGRG00000004756	Sbno1	100	97.631	ENSECAG00000006127	SBNO1	100	97.631	Equus_caballus
ENSCGRG00000004756	Sbno1	83	97.814	ENSEEUG00000003793	SBNO1	83	97.814	Erinaceus_europaeus
ENSCGRG00000004756	Sbno1	99	85.612	ENSELUG00000002886	sbno1	95	85.612	Esox_lucius
ENSCGRG00000004756	Sbno1	99	98.188	ENSFCAG00000015331	SBNO1	99	97.629	Felis_catus
ENSCGRG00000004756	Sbno1	99	94.394	ENSFALG00000009273	SBNO1	100	91.535	Ficedula_albicollis
ENSCGRG00000004756	Sbno1	100	94.757	ENSFDAG00000014232	SBNO1	100	94.616	Fukomys_damarensis
ENSCGRG00000004756	Sbno1	99	82.437	ENSFHEG00000007360	sbno1	95	82.437	Fundulus_heteroclitus
ENSCGRG00000004756	Sbno1	96	83.486	ENSGMOG00000018229	sbno1	94	83.486	Gadus_morhua
ENSCGRG00000004756	Sbno1	87	95.178	ENSGALG00000003392	SBNO1	99	91.714	Gallus_gallus
ENSCGRG00000004756	Sbno1	99	82.437	ENSGAFG00000003960	sbno1	95	82.437	Gambusia_affinis
ENSCGRG00000004756	Sbno1	96	83.394	ENSGACG00000015633	sbno1	99	78.490	Gasterosteus_aculeatus
ENSCGRG00000004756	Sbno1	100	93.548	ENSGAGG00000001065	SBNO1	100	90.739	Gopherus_agassizii
ENSCGRG00000004756	Sbno1	100	97.478	ENSGGOG00000015000	SBNO1	100	97.478	Gorilla_gorilla
ENSCGRG00000004756	Sbno1	99	68.114	ENSHBUG00000011910	sbno1	100	68.227	Haplochromis_burtoni
ENSCGRG00000004756	Sbno1	99	98.011	ENSHGLG00000014165	-	99	98.011	Heterocephalus_glaber_female
ENSCGRG00000004756	Sbno1	91	83.497	ENSHCOG00000003246	sbno1	95	83.794	Hippocampus_comes
ENSCGRG00000004756	Sbno1	99	84.560	ENSIPUG00000015830	Sbno1	93	87.634	Ictalurus_punctatus
ENSCGRG00000004756	Sbno1	100	98.109	ENSSTOG00000023221	SBNO1	100	98.109	Ictidomys_tridecemlineatus
ENSCGRG00000004756	Sbno1	100	97.416	ENSJJAG00000001741	Sbno1	100	97.416	Jaculus_jaculus
ENSCGRG00000004756	Sbno1	99	83.032	ENSKMAG00000009696	sbno1	95	83.485	Kryptolebias_marmoratus
ENSCGRG00000004756	Sbno1	100	83.571	ENSLBEG00000007623	sbno1	95	83.871	Labrus_bergylta
ENSCGRG00000004756	Sbno1	100	80.599	ENSLACG00000017227	SBNO1	93	89.323	Latimeria_chalumnae
ENSCGRG00000004756	Sbno1	99	87.612	ENSLOCG00000005725	sbno1	93	87.612	Lepisosteus_oculatus
ENSCGRG00000004756	Sbno1	100	96.482	ENSLAFG00000002135	SBNO1	100	96.482	Loxodonta_africana
ENSCGRG00000004756	Sbno1	100	97.509	ENSMFAG00000031429	SBNO1	100	97.272	Macaca_fascicularis
ENSCGRG00000004756	Sbno1	100	97.509	ENSMMUG00000011496	SBNO1	100	97.272	Macaca_mulatta
ENSCGRG00000004756	Sbno1	99	98.373	ENSMLEG00000033260	SBNO1	99	98.373	Mandrillus_leucophaeus
ENSCGRG00000004756	Sbno1	99	83.604	ENSMAMG00000005473	sbno1	95	83.604	Mastacembelus_armatus
ENSCGRG00000004756	Sbno1	99	94.213	ENSMGAG00000003274	SBNO1	100	91.601	Meleagris_gallopavo
ENSCGRG00000004756	Sbno1	52	99.848	ENSMAUG00000004834	-	99	99.848	Mesocricetus_auratus
ENSCGRG00000004756	Sbno1	100	96.339	ENSMICG00000006573	-	100	96.339	Microcebus_murinus
ENSCGRG00000004756	Sbno1	100	99.212	ENSMOCG00000009390	Sbno1	100	99.212	Microtus_ochrogaster
ENSCGRG00000004756	Sbno1	99	82.353	ENSMMOG00000008691	sbno1	94	82.353	Mola_mola
ENSCGRG00000004756	Sbno1	99	96.558	ENSMODG00000012470	SBNO1	98	94.253	Monodelphis_domestica
ENSCGRG00000004756	Sbno1	99	81.183	ENSMALG00000001056	sbno1	96	80.783	Monopterus_albus
ENSCGRG00000004756	Sbno1	99	98.732	MGP_CAROLIEiJ_G0027749	Sbno1	99	99.545	Mus_caroli
ENSCGRG00000004756	Sbno1	99	98.778	ENSMUSG00000038095	Sbno1	100	99.109	Mus_musculus
ENSCGRG00000004756	Sbno1	99	98.562	MGP_PahariEiJ_G0024329	Sbno1	100	98.855	Mus_pahari
ENSCGRG00000004756	Sbno1	99	98.732	MGP_SPRETEiJ_G0028747	Sbno1	100	98.728	Mus_spretus
ENSCGRG00000004756	Sbno1	100	97.631	ENSMPUG00000001658	SBNO1	100	97.631	Mustela_putorius_furo
ENSCGRG00000004756	Sbno1	100	96.985	ENSMLUG00000017159	SBNO1	100	96.985	Myotis_lucifugus
ENSCGRG00000004756	Sbno1	100	97.990	ENSNGAG00000012620	Sbno1	100	97.990	Nannospalax_galili
ENSCGRG00000004756	Sbno1	99	73.857	ENSNBRG00000019189	sbno1	100	73.950	Neolamprologus_brichardi
ENSCGRG00000004756	Sbno1	100	93.543	ENSNLEG00000001502	SBNO1	100	93.543	Nomascus_leucogenys
ENSCGRG00000004756	Sbno1	60	93.548	ENSMEUG00000008768	-	93	86.076	Notamacropus_eugenii
ENSCGRG00000004756	Sbno1	99	96.209	ENSOPRG00000011054	SBNO1	100	93.477	Ochotona_princeps
ENSCGRG00000004756	Sbno1	100	97.244	ENSODEG00000009997	SBNO1	100	97.244	Octodon_degus
ENSCGRG00000004756	Sbno1	99	81.720	ENSONIG00000015348	sbno1	96	81.720	Oreochromis_niloticus
ENSCGRG00000004756	Sbno1	98	95.478	ENSOCUG00000002441	SBNO1	95	95.478	Oryctolagus_cuniculus
ENSCGRG00000004756	Sbno1	99	81.441	ENSORLG00000001593	sbno1	95	81.441	Oryzias_latipes
ENSCGRG00000004756	Sbno1	99	81.441	ENSORLG00020015216	sbno1	95	81.441	Oryzias_latipes_hni
ENSCGRG00000004756	Sbno1	99	81.622	ENSORLG00015002726	sbno1	95	81.622	Oryzias_latipes_hsok
ENSCGRG00000004756	Sbno1	99	82.033	ENSOMEG00000019313	sbno1	95	82.033	Oryzias_melastigma
ENSCGRG00000004756	Sbno1	52	93.646	ENSOGAG00000010781	-	99	93.949	Otolemur_garnettii
ENSCGRG00000004756	Sbno1	100	96.918	ENSOARG00000004404	SBNO1	100	96.918	Ovis_aries
ENSCGRG00000004756	Sbno1	100	97.717	ENSPPAG00000024635	SBNO1	100	97.717	Pan_paniscus
ENSCGRG00000004756	Sbno1	99	98.188	ENSPPRG00000022092	SBNO1	99	97.629	Panthera_pardus
ENSCGRG00000004756	Sbno1	100	97.270	ENSPTIG00000017803	SBNO1	100	97.270	Panthera_tigris_altaica
ENSCGRG00000004756	Sbno1	100	97.795	ENSPTRG00000005597	SBNO1	100	97.795	Pan_troglodytes
ENSCGRG00000004756	Sbno1	100	97.795	ENSPANG00000011640	SBNO1	100	97.795	Papio_anubis
ENSCGRG00000004756	Sbno1	99	84.919	ENSPKIG00000001441	sbno1	95	84.919	Paramormyrops_kingsleyae
ENSCGRG00000004756	Sbno1	99	93.345	ENSPSIG00000009572	-	100	90.701	Pelodiscus_sinensis
ENSCGRG00000004756	Sbno1	91	89.865	ENSPSIG00000009256	-	100	87.014	Pelodiscus_sinensis
ENSCGRG00000004756	Sbno1	100	98.976	ENSPEMG00000016087	Sbno1	100	98.976	Peromyscus_maniculatus_bairdii
ENSCGRG00000004756	Sbno1	99	96.196	ENSPCIG00000010985	SBNO1	99	93.970	Phascolarctos_cinereus
ENSCGRG00000004756	Sbno1	99	82.437	ENSPFOG00000005069	sbno1	95	82.437	Poecilia_formosa
ENSCGRG00000004756	Sbno1	99	82.437	ENSPLAG00000015015	sbno1	95	82.437	Poecilia_latipinna
ENSCGRG00000004756	Sbno1	99	82.437	ENSPMEG00000021212	sbno1	95	82.437	Poecilia_mexicana
ENSCGRG00000004756	Sbno1	99	82.079	ENSPREG00000017746	sbno1	95	82.079	Poecilia_reticulata
ENSCGRG00000004756	Sbno1	99	98.373	ENSPPYG00000005084	SBNO1	100	96.770	Pongo_abelii
ENSCGRG00000004756	Sbno1	89	91.918	ENSPCAG00000008634	SBNO1	88	91.884	Procavia_capensis
ENSCGRG00000004756	Sbno1	100	97.416	ENSPCOG00000024277	SBNO1	100	97.416	Propithecus_coquereli
ENSCGRG00000004756	Sbno1	92	98.016	ENSPVAG00000015304	SBNO1	87	98.016	Pteropus_vampyrus
ENSCGRG00000004756	Sbno1	99	82.079	ENSPNYG00000004291	sbno1	96	82.079	Pundamilia_nyererei
ENSCGRG00000004756	Sbno1	99	86.176	ENSPNAG00000015622	sbno1	95	86.176	Pygocentrus_nattereri
ENSCGRG00000004756	Sbno1	99	98.896	ENSRNOG00000001064	Sbno1	99	98.896	Rattus_norvegicus
ENSCGRG00000004756	Sbno1	100	97.953	ENSRROG00000034230	SBNO1	100	97.953	Rhinopithecus_roxellana
ENSCGRG00000004756	Sbno1	97	91.964	ENSSBOG00000015422	SBNO1	100	91.964	Saimiri_boliviensis_boliviensis
ENSCGRG00000004756	Sbno1	99	84.740	ENSSFOG00015019025	sbno1	95	84.740	Scleropages_formosus
ENSCGRG00000004756	Sbno1	99	81.720	ENSSMAG00000013640	sbno1	96	81.462	Scophthalmus_maximus
ENSCGRG00000004756	Sbno1	99	83.243	ENSSDUG00000023480	sbno1	95	83.243	Seriola_dumerili
ENSCGRG00000004756	Sbno1	99	83.243	ENSSLDG00000007928	sbno1	95	83.243	Seriola_lalandi_dorsalis
ENSCGRG00000004756	Sbno1	91	96.975	ENSSARG00000002594	SBNO1	89	97.249	Sorex_araneus
ENSCGRG00000004756	Sbno1	99	92.613	ENSSPUG00000012640	SBNO1	100	88.586	Sphenodon_punctatus
ENSCGRG00000004756	Sbno1	99	82.079	ENSSPAG00000016244	sbno1	95	82.079	Stegastes_partitus
ENSCGRG00000004756	Sbno1	100	97.559	ENSSSCG00000009776	SBNO1	100	97.559	Sus_scrofa
ENSCGRG00000004756	Sbno1	99	94.575	ENSTGUG00000005380	SBNO1	100	91.392	Taeniopygia_guttata
ENSCGRG00000004756	Sbno1	99	83.577	ENSTRUG00000018490	sbno1	99	75.088	Takifugu_rubripes
ENSCGRG00000004756	Sbno1	56	70.632	ENSTNIG00000013506	sbno1	99	70.984	Tetraodon_nigroviridis
ENSCGRG00000004756	Sbno1	100	97.631	ENSUAMG00000019671	SBNO1	100	97.631	Ursus_americanus
ENSCGRG00000004756	Sbno1	100	97.631	ENSUMAG00000004002	SBNO1	100	97.631	Ursus_maritimus
ENSCGRG00000004756	Sbno1	95	92.350	ENSVPAG00000007024	SBNO1	95	92.350	Vicugna_pacos
ENSCGRG00000004756	Sbno1	100	97.416	ENSVVUG00000027807	SBNO1	100	97.416	Vulpes_vulpes
ENSCGRG00000004756	Sbno1	99	90.909	ENSXETG00000031930	SBNO1	95	90.909	Xenopus_tropicalis
ENSCGRG00000004756	Sbno1	87	82.025	ENSXCOG00000011607	sbno1	91	82.025	Xiphophorus_couchianus
ENSCGRG00000004756	Sbno1	99	82.079	ENSXMAG00000002140	sbno1	95	82.079	Xiphophorus_maculatus