EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000004814 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|MAZR|POZ-AT hook-zinc finger protein|Zfp278
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 18152 bases
Position: chrJH001103.1:132500-150651
Accession: 100763609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000006582	zf-C2H2	PF00096.26	8.7e-28	1	5
ENSCGRP00000006582	zf-C2H2	PF00096.26	8.7e-28	2	5
ENSCGRP00000006582	zf-C2H2	PF00096.26	8.7e-28	3	5
ENSCGRP00000006582	zf-C2H2	PF00096.26	8.7e-28	4	5
ENSCGRP00000006582	zf-C2H2	PF00096.26	8.7e-28	5	5
ENSCGRP00000006583	zf-C2H2	PF00096.26	6.6e-22	1	4
ENSCGRP00000006583	zf-C2H2	PF00096.26	6.6e-22	2	4
ENSCGRP00000006583	zf-C2H2	PF00096.26	6.6e-22	3	4
ENSCGRP00000006583	zf-C2H2	PF00096.26	6.6e-22	4	4
ENSCGRP00000006584	zf-C2H2	PF00096.26	8e-17	1	3
ENSCGRP00000006584	zf-C2H2	PF00096.26	8e-17	2	3
ENSCGRP00000006584	zf-C2H2	PF00096.26	8e-17	3	3
ENSCGRP00000006582	zf-met	PF12874.7	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000006693	-	1794	-	ENSCGRP00000006583	597 (aa)	-	-
ENSCGRT00000006692	-	1932	XM_007649885	ENSCGRP00000006582	643 (aa)	XP_007648075	UPI000454B4E1
ENSCGRT00000006695	-	309	-	ENSCGRP00000006585	102 (aa)	-	UPI00001B63B0
ENSCGRT00000006694	-	1482	-	ENSCGRP00000006584	493 (aa)	-	-
ENSCGRT00000006696	-	210	-	ENSCGRP00000006586	70 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000004814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000004814	Patz1	84	37.895	ENSCGRG00000000677	Zbtb14	83	38.889
ENSCGRG00000004814	Patz1	54	35.714	ENSCGRG00000002730	Zfp39	58	42.697
ENSCGRG00000004814	Patz1	58	36.283	ENSCGRG00000015472	Repin1	80	37.615
ENSCGRG00000004814	Patz1	93	35.542	ENSCGRG00000012659	Mynn	80	35.542
ENSCGRG00000004814	Patz1	65	32.281	ENSCGRG00000018332	Zfp53	65	39.326
ENSCGRG00000004814	Patz1	59	31.250	ENSCGRG00000000632	-	92	40.000
ENSCGRG00000004814	Patz1	56	33.663	ENSCGRG00000004206	-	79	37.931
ENSCGRG00000004814	Patz1	56	34.426	ENSCGRG00000017528	Zfp94	71	34.426
ENSCGRG00000004814	Patz1	53	33.333	ENSCGRG00000015919	Zfp384	56	30.882
ENSCGRG00000004814	Patz1	60	32.639	ENSCGRG00000008531	-	85	44.565
ENSCGRG00000004814	Patz1	86	35.294	ENSCGRG00000010436	-	86	41.489
ENSCGRG00000004814	Patz1	59	30.846	ENSCGRG00000012333	Zfp574	53	30.660
ENSCGRG00000004814	Patz1	59	31.250	ENSCGRG00000014598	Zfp319	79	31.250
ENSCGRG00000004814	Patz1	56	34.014	ENSCGRG00000014813	Zfp454	70	34.014
ENSCGRG00000004814	Patz1	76	30.000	ENSCGRG00000015951	Zfp131	64	30.000
ENSCGRG00000004814	Patz1	54	32.203	ENSCGRG00000008922	2610008E11Rik	68	32.203
ENSCGRG00000004814	Patz1	64	34.266	ENSCGRG00000012088	Zfp560	61	41.772
ENSCGRG00000004814	Patz1	60	30.114	ENSCGRG00000013626	Zfp715	61	40.860
ENSCGRG00000004814	Patz1	52	32.195	ENSCGRG00000006987	Zfp768	52	36.601
ENSCGRG00000004814	Patz1	53	33.333	ENSCGRG00000015629	-	57	45.745
ENSCGRG00000004814	Patz1	60	35.196	ENSCGRG00000013919	Zfp709	63	35.514
ENSCGRG00000004814	Patz1	60	30.108	ENSCGRG00000010996	-	83	35.507
ENSCGRG00000004814	Patz1	53	37.037	ENSCGRG00000009462	Zfp236	60	37.037
ENSCGRG00000004814	Patz1	58	30.233	ENSCGRG00000000778	-	76	38.462
ENSCGRG00000004814	Patz1	53	47.273	ENSCGRG00000016788	-	60	47.273
ENSCGRG00000004814	Patz1	59	37.903	ENSCGRG00000008411	Gm3854	68	42.105
ENSCGRG00000004814	Patz1	62	37.129	ENSCGRG00000000411	-	74	37.419
ENSCGRG00000004814	Patz1	60	35.294	ENSCGRG00000000280	-	82	41.489
ENSCGRG00000004814	Patz1	52	44.681	ENSCGRG00000009742	-	69	44.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004814	Patz1	100	97.978	ENSG00000100105	PATZ1	93	97.978	Homo_sapiens
ENSCGRG00000004814	Patz1	99	58.664	ENSAPOG00000018447	patz1	94	57.514	Acanthochromis_polyacanthus
ENSCGRG00000004814	Patz1	100	97.667	ENSAMEG00000007074	PATZ1	93	97.667	Ailuropoda_melanoleuca
ENSCGRG00000004814	Patz1	100	57.078	ENSACIG00000016779	patz1	94	58.140	Amphilophus_citrinellus
ENSCGRG00000004814	Patz1	100	56.269	ENSAPEG00000013354	patz1	93	56.418	Amphiprion_percula
ENSCGRG00000004814	Patz1	100	61.373	ENSATEG00000011260	patz1	94	60.944	Anabas_testudineus
ENSCGRG00000004814	Patz1	91	90.925	ENSAPLG00000003934	PATZ1	99	90.753	Anas_platyrhynchos
ENSCGRG00000004814	Patz1	100	97.978	ENSANAG00000029603	PATZ1	93	97.978	Aotus_nancymaae
ENSCGRG00000004814	Patz1	99	60.000	ENSAMXG00000002273	patz1	93	58.634	Astyanax_mexicanus
ENSCGRG00000004814	Patz1	100	97.667	ENSBTAG00000005478	PATZ1	93	97.667	Bos_taurus
ENSCGRG00000004814	Patz1	100	97.978	ENSCJAG00000010978	PATZ1	93	97.978	Callithrix_jacchus
ENSCGRG00000004814	Patz1	100	97.823	ENSCAFG00000013087	PATZ1	93	97.823	Canis_familiaris
ENSCGRG00000004814	Patz1	100	97.201	ENSCHIG00000020203	PATZ1	93	97.201	Capra_hircus
ENSCGRG00000004814	Patz1	100	97.667	ENSTSYG00000033183	PATZ1	93	97.667	Carlito_syrichta
ENSCGRG00000004814	Patz1	100	97.978	ENSCCAG00000028772	PATZ1	93	97.978	Cebus_capucinus
ENSCGRG00000004814	Patz1	100	97.978	ENSCATG00000006101	PATZ1	93	97.978	Cercocebus_atys
ENSCGRG00000004814	Patz1	100	88.509	ENSCPBG00000011277	PATZ1	93	88.199	Chrysemys_picta_bellii
ENSCGRG00000004814	Patz1	100	97.978	ENSCANG00000024972	PATZ1	93	97.978	Colobus_angolensis_palliatus
ENSCGRG00000004814	Patz1	100	97.823	ENSCGRG00001004071	Patz1	93	97.823	Cricetulus_griseus_chok1gshd
ENSCGRG00000004814	Patz1	100	53.204	ENSCSEG00000001385	patz1	93	53.731	Cynoglossus_semilaevis
ENSCGRG00000004814	Patz1	100	57.256	ENSCVAG00000007684	patz1	93	58.136	Cyprinodon_variegatus
ENSCGRG00000004814	Patz1	99	58.386	ENSDARG00000076584	patz1	92	57.166	Danio_rerio
ENSCGRG00000004814	Patz1	89	97.391	ENSDNOG00000003183	PATZ1	92	97.391	Dasypus_novemcinctus
ENSCGRG00000004814	Patz1	100	97.823	ENSDORG00000023834	Patz1	93	97.823	Dipodomys_ordii
ENSCGRG00000004814	Patz1	100	97.823	ENSECAG00000025030	PATZ1	93	97.823	Equus_caballus
ENSCGRG00000004814	Patz1	99	60.000	ENSELUG00000002333	patz1	93	56.991	Esox_lucius
ENSCGRG00000004814	Patz1	100	97.823	ENSFCAG00000030253	PATZ1	93	97.823	Felis_catus
ENSCGRG00000004814	Patz1	92	91.186	ENSFALG00000007450	PATZ1	99	91.141	Ficedula_albicollis
ENSCGRG00000004814	Patz1	100	95.943	ENSFDAG00000005614	PATZ1	95	95.943	Fukomys_damarensis
ENSCGRG00000004814	Patz1	100	56.583	ENSFHEG00000014755	patz1	93	56.270	Fundulus_heteroclitus
ENSCGRG00000004814	Patz1	98	53.363	ENSGMOG00000001062	patz1	93	52.395	Gadus_morhua
ENSCGRG00000004814	Patz1	100	88.682	ENSGALG00000006934	PATZ1	93	88.682	Gallus_gallus
ENSCGRG00000004814	Patz1	100	58.174	ENSGAFG00000010053	patz1	93	56.358	Gambusia_affinis
ENSCGRG00000004814	Patz1	91	91.595	ENSGAGG00000003214	PATZ1	100	91.424	Gopherus_agassizii
ENSCGRG00000004814	Patz1	100	98.134	ENSGGOG00000017171	PATZ1	93	98.134	Gorilla_gorilla
ENSCGRG00000004814	Patz1	100	60.714	ENSHCOG00000017644	patz1	94	59.351	Hippocampus_comes
ENSCGRG00000004814	Patz1	99	57.725	ENSIPUG00000017653	patz1	92	51.906	Ictalurus_punctatus
ENSCGRG00000004814	Patz1	100	97.667	ENSSTOG00000020707	PATZ1	93	97.667	Ictidomys_tridecemlineatus
ENSCGRG00000004814	Patz1	100	96.774	ENSJJAG00000015259	Patz1	93	96.749	Jaculus_jaculus
ENSCGRG00000004814	Patz1	100	56.012	ENSKMAG00000008157	patz1	93	56.127	Kryptolebias_marmoratus
ENSCGRG00000004814	Patz1	100	97.045	ENSLAFG00000002317	PATZ1	93	97.045	Loxodonta_africana
ENSCGRG00000004814	Patz1	100	97.823	ENSMFAG00000040968	PATZ1	93	97.823	Macaca_fascicularis
ENSCGRG00000004814	Patz1	100	97.823	ENSMNEG00000037588	PATZ1	93	97.823	Macaca_nemestrina
ENSCGRG00000004814	Patz1	100	97.978	ENSMLEG00000030938	PATZ1	93	97.978	Mandrillus_leucophaeus
ENSCGRG00000004814	Patz1	100	56.426	ENSMAMG00000023652	patz1	93	56.740	Mastacembelus_armatus
ENSCGRG00000004814	Patz1	91	87.350	ENSMGAG00000008439	PATZ1	100	87.179	Meleagris_gallopavo
ENSCGRG00000004814	Patz1	100	98.783	ENSMAUG00000004129	Patz1	93	98.756	Mesocricetus_auratus
ENSCGRG00000004814	Patz1	100	97.667	ENSMICG00000005430	PATZ1	93	97.667	Microcebus_murinus
ENSCGRG00000004814	Patz1	100	98.377	ENSMOCG00000014488	Patz1	93	98.289	Microtus_ochrogaster
ENSCGRG00000004814	Patz1	99	52.854	ENSMMOG00000021679	patz1	93	53.419	Mola_mola
ENSCGRG00000004814	Patz1	100	55.505	ENSMALG00000021172	patz1	93	55.505	Monopterus_albus
ENSCGRG00000004814	Patz1	100	97.978	MGP_CAROLIEiJ_G0016007	Patz1	93	97.978	Mus_caroli
ENSCGRG00000004814	Patz1	100	98.134	ENSMUSG00000020453	Patz1	93	98.134	Mus_musculus
ENSCGRG00000004814	Patz1	100	98.134	MGP_PahariEiJ_G0016884	Patz1	93	98.134	Mus_pahari
ENSCGRG00000004814	Patz1	100	98.134	MGP_SPRETEiJ_G0016846	Patz1	93	98.134	Mus_spretus
ENSCGRG00000004814	Patz1	100	97.512	ENSMLUG00000009942	PATZ1	93	97.512	Myotis_lucifugus
ENSCGRG00000004814	Patz1	100	98.445	ENSNGAG00000010268	Patz1	93	98.445	Nannospalax_galili
ENSCGRG00000004814	Patz1	100	57.271	ENSNBRG00000016032	patz1	94	57.928	Neolamprologus_brichardi
ENSCGRG00000004814	Patz1	72	93.333	ENSMEUG00000016293	PATZ1	100	93.333	Notamacropus_eugenii
ENSCGRG00000004814	Patz1	100	97.045	ENSODEG00000003589	PATZ1	93	97.045	Octodon_degus
ENSCGRG00000004814	Patz1	100	57.121	ENSONIG00000004248	patz1	93	57.277	Oreochromis_niloticus
ENSCGRG00000004814	Patz1	100	91.473	ENSOANG00000014654	PATZ1	93	92.248	Ornithorhynchus_anatinus
ENSCGRG00000004814	Patz1	100	56.956	ENSORLG00020010937	patz1	93	56.270	Oryzias_latipes_hni
ENSCGRG00000004814	Patz1	100	56.358	ENSORLG00015007396	patz1	93	56.358	Oryzias_latipes_hsok
ENSCGRG00000004814	Patz1	100	56.082	ENSOMEG00000006636	patz1	93	56.082	Oryzias_melastigma
ENSCGRG00000004814	Patz1	100	97.512	ENSOGAG00000027905	PATZ1	93	97.512	Otolemur_garnettii
ENSCGRG00000004814	Patz1	100	98.134	ENSPPAG00000033227	PATZ1	93	98.134	Pan_paniscus
ENSCGRG00000004814	Patz1	100	97.823	ENSPPRG00000001573	PATZ1	93	97.823	Panthera_pardus
ENSCGRG00000004814	Patz1	92	98.314	ENSPTIG00000007937	PATZ1	91	98.314	Panthera_tigris_altaica
ENSCGRG00000004814	Patz1	100	98.134	ENSPTRG00000014268	PATZ1	93	98.134	Pan_troglodytes
ENSCGRG00000004814	Patz1	100	97.978	ENSPANG00000006821	PATZ1	93	97.978	Papio_anubis
ENSCGRG00000004814	Patz1	100	61.078	ENSPKIG00000019584	patz1	94	60.163	Paramormyrops_kingsleyae
ENSCGRG00000004814	Patz1	64	83.051	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSCGRG00000004814	Patz1	62	95.202	ENSPSIG00000011562	-	100	95.714	Pelodiscus_sinensis
ENSCGRG00000004814	Patz1	100	55.389	ENSPMGG00000010196	patz1	93	55.689	Periophthalmus_magnuspinnatus
ENSCGRG00000004814	Patz1	100	98.325	ENSPEMG00000005321	Patz1	93	98.325	Peromyscus_maniculatus_bairdii
ENSCGRG00000004814	Patz1	100	56.495	ENSPLAG00000010425	patz1	100	56.908	Poecilia_latipinna
ENSCGRG00000004814	Patz1	100	56.740	ENSPMEG00000000255	patz1	93	56.358	Poecilia_mexicana
ENSCGRG00000004814	Patz1	100	56.241	ENSPREG00000002440	patz1	93	55.882	Poecilia_reticulata
ENSCGRG00000004814	Patz1	100	97.823	ENSPPYG00000011732	PATZ1	93	97.823	Pongo_abelii
ENSCGRG00000004814	Patz1	100	97.512	ENSPCOG00000019729	PATZ1	93	97.512	Propithecus_coquereli
ENSCGRG00000004814	Patz1	100	97.667	ENSPVAG00000001749	PATZ1	93	97.667	Pteropus_vampyrus
ENSCGRG00000004814	Patz1	100	57.824	ENSPNYG00000013542	patz1	93	57.824	Pundamilia_nyererei
ENSCGRG00000004814	Patz1	90	59.903	ENSPNAG00000017222	patz1	99	58.937	Pygocentrus_nattereri
ENSCGRG00000004814	Patz1	100	97.978	ENSRBIG00000044231	PATZ1	93	97.978	Rhinopithecus_bieti
ENSCGRG00000004814	Patz1	100	97.978	ENSRROG00000037155	PATZ1	93	97.978	Rhinopithecus_roxellana
ENSCGRG00000004814	Patz1	100	97.978	ENSSBOG00000003894	PATZ1	93	97.978	Saimiri_boliviensis_boliviensis
ENSCGRG00000004814	Patz1	78	88.462	ENSSFOG00015013244	patz1	72	88.462	Scleropages_formosus
ENSCGRG00000004814	Patz1	100	87.907	ENSSPUG00000015298	PATZ1	91	87.752	Sphenodon_punctatus
ENSCGRG00000004814	Patz1	91	97.938	ENSSSCG00000010027	PATZ1	100	98.148	Sus_scrofa
ENSCGRG00000004814	Patz1	100	56.535	ENSTRUG00000015366	patz1	93	56.828	Takifugu_rubripes
ENSCGRG00000004814	Patz1	100	97.823	ENSTTRG00000010279	PATZ1	93	97.823	Tursiops_truncatus
ENSCGRG00000004814	Patz1	100	97.822	ENSUAMG00000015014	PATZ1	93	97.822	Ursus_americanus
ENSCGRG00000004814	Patz1	100	72.601	ENSXETG00000004190	patz1	93	71.827	Xenopus_tropicalis
ENSCGRG00000004814	Patz1	100	57.300	ENSXMAG00000015531	patz1	93	56.672	Xiphophorus_maculatus