EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000004939 (Gene tree)
Gene ID: -
Gene Symbol: Parn
Alias: 1200003I18Rik|DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 158680 bases
Position: chrJH000052.1:3419235-3577914
Accession: 100771839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000006759	R3H	PF01424.22	1.6e-06	1	1
ENSCGRP00000006759	RNA_bind	PF08675.11	1.4e-33	1	1
ENSCGRP00000006759	CAF1	PF04857.20	5.4e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000006871	-	6331	XM_003496697	ENSCGRP00000006759	625 (aa)	XP_003496745	UPI00022F365B

Gene Model

Click here to download ENSCGRG00000004939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000004939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000004939	Parn	100	85.826	ENSG00000140694	PARN	100	96.610	Homo_sapiens
ENSCGRG00000004939	Parn	100	85.358	ENSAMEG00000011208	PARN	100	85.358	Ailuropoda_melanoleuca
ENSCGRG00000004939	Parn	84	74.813	ENSACIG00000000619	parn	83	74.813	Amphilophus_citrinellus
ENSCGRG00000004939	Parn	91	73.264	ENSAOCG00000003465	parn	83	73.264	Amphiprion_ocellaris
ENSCGRG00000004939	Parn	74	76.744	ENSAPEG00000010661	parn	91	76.744	Amphiprion_percula
ENSCGRG00000004939	Parn	99	68.944	ENSATEG00000004661	parn	83	74.826	Anabas_testudineus
ENSCGRG00000004939	Parn	99	79.180	ENSAPLG00000013914	PARN	99	79.180	Anas_platyrhynchos
ENSCGRG00000004939	Parn	100	74.808	ENSACAG00000004973	PARN	100	75.115	Anolis_carolinensis
ENSCGRG00000004939	Parn	100	84.735	ENSANAG00000031516	PARN	100	96.610	Aotus_nancymaae
ENSCGRG00000004939	Parn	91	74.093	ENSACLG00000004742	parn	84	74.093	Astatotilapia_calliptera
ENSCGRG00000004939	Parn	91	72.426	ENSAMXG00000012390	parn	93	69.828	Astyanax_mexicanus
ENSCGRG00000004939	Parn	100	82.371	ENSBTAG00000018097	PARN	100	83.966	Bos_taurus
ENSCGRG00000004939	Parn	100	85.202	ENSCJAG00000015866	PARN	100	96.610	Callithrix_jacchus
ENSCGRG00000004939	Parn	100	84.711	ENSCAFG00000018795	PARN	100	84.711	Canis_familiaris
ENSCGRG00000004939	Parn	100	85.023	ENSCAFG00020024126	PARN	100	85.023	Canis_lupus_dingo
ENSCGRG00000004939	Parn	100	85.179	ENSCHIG00000018143	PARN	100	85.179	Capra_hircus
ENSCGRG00000004939	Parn	74	60.707	ENSCAPG00000007984	PARN	78	60.707	Cavia_aperea
ENSCGRG00000004939	Parn	100	84.531	ENSCPOG00000002263	PARN	100	84.531	Cavia_porcellus
ENSCGRG00000004939	Parn	100	85.202	ENSCCAG00000030367	PARN	100	96.610	Cebus_capucinus
ENSCGRG00000004939	Parn	100	80.253	ENSCATG00000041368	PARN	100	96.610	Cercocebus_atys
ENSCGRG00000004939	Parn	100	85.156	ENSCLAG00000015406	PARN	99	85.156	Chinchilla_lanigera
ENSCGRG00000004939	Parn	100	85.981	ENSCSAG00000008142	PARN	100	85.981	Chlorocebus_sabaeus
ENSCGRG00000004939	Parn	99	68.454	ENSCHOG00000007014	PARN	100	68.454	Choloepus_hoffmanni
ENSCGRG00000004939	Parn	85	82.202	ENSCPBG00000006609	PARN	94	82.169	Chrysemys_picta_bellii
ENSCGRG00000004939	Parn	81	44.653	ENSCING00000010142	-	99	44.361	Ciona_intestinalis
ENSCGRG00000004939	Parn	100	75.228	ENSCANG00000028849	-	100	96.610	Colobus_angolensis_palliatus
ENSCGRG00000004939	Parn	100	100.000	ENSCGRG00001012096	Parn	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000004939	Parn	90	71.231	ENSCSEG00000002064	parn	100	61.538	Cynoglossus_semilaevis
ENSCGRG00000004939	Parn	91	72.790	ENSCVAG00000014848	parn	83	72.790	Cyprinodon_variegatus
ENSCGRG00000004939	Parn	100	63.914	ENSDARG00000102634	parn	100	58.333	Danio_rerio
ENSCGRG00000004939	Parn	100	85.603	ENSDNOG00000000833	PARN	100	85.603	Dasypus_novemcinctus
ENSCGRG00000004939	Parn	74	85.932	ENSETEG00000014828	-	69	85.932	Echinops_telfairi
ENSCGRG00000004939	Parn	100	85.491	ENSEASG00005011400	PARN	100	85.491	Equus_asinus_asinus
ENSCGRG00000004939	Parn	100	85.647	ENSECAG00000017792	PARN	100	85.647	Equus_caballus
ENSCGRG00000004939	Parn	86	76.018	ENSEEUG00000010370	PARN	86	76.018	Erinaceus_europaeus
ENSCGRG00000004939	Parn	90	71.853	ENSELUG00000013139	parn	75	71.853	Esox_lucius
ENSCGRG00000004939	Parn	100	85.023	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSCGRG00000004939	Parn	99	78.639	ENSFALG00000003911	PARN	98	78.639	Ficedula_albicollis
ENSCGRG00000004939	Parn	100	85.156	ENSFDAG00000009234	PARN	100	85.156	Fukomys_damarensis
ENSCGRG00000004939	Parn	91	66.440	ENSFHEG00000013738	parn	92	74.576	Fundulus_heteroclitus
ENSCGRG00000004939	Parn	84	74.953	ENSGMOG00000003231	parn	97	74.953	Gadus_morhua
ENSCGRG00000004939	Parn	100	78.091	ENSGALG00000003091	PARN	100	78.091	Gallus_gallus
ENSCGRG00000004939	Parn	84	75.836	ENSGAFG00000011061	parn	83	72.759	Gambusia_affinis
ENSCGRG00000004939	Parn	100	67.919	ENSGACG00000019501	parn	100	67.919	Gasterosteus_aculeatus
ENSCGRG00000004939	Parn	51	77.982	ENSGAGG00000023281	PARN	83	77.914	Gopherus_agassizii
ENSCGRG00000004939	Parn	97	86.378	ENSGGOG00000025224	PARN	100	96.610	Gorilla_gorilla
ENSCGRG00000004939	Parn	100	66.876	ENSHBUG00000017906	parn	90	75.791	Haplochromis_burtoni
ENSCGRG00000004939	Parn	100	85.312	ENSHGLG00000010886	PARN	100	85.312	Heterocephalus_glaber_female
ENSCGRG00000004939	Parn	100	85.312	ENSHGLG00100014659	PARN	100	85.312	Heterocephalus_glaber_male
ENSCGRG00000004939	Parn	83	72.401	ENSHCOG00000008683	parn	91	72.401	Hippocampus_comes
ENSCGRG00000004939	Parn	91	60.976	ENSIPUG00000012401	parn	85	60.976	Ictalurus_punctatus
ENSCGRG00000004939	Parn	100	85.915	ENSSTOG00000007519	PARN	100	85.915	Ictidomys_tridecemlineatus
ENSCGRG00000004939	Parn	100	86.867	ENSJJAG00000023049	Parn	100	86.867	Jaculus_jaculus
ENSCGRG00000004939	Parn	92	72.945	ENSKMAG00000009462	parn	83	73.575	Kryptolebias_marmoratus
ENSCGRG00000004939	Parn	91	72.964	ENSLBEG00000009167	parn	89	72.964	Labrus_bergylta
ENSCGRG00000004939	Parn	79	76.587	ENSLACG00000004207	PARN	100	74.764	Latimeria_chalumnae
ENSCGRG00000004939	Parn	92	74.742	ENSLOCG00000000715	parn	85	74.742	Lepisosteus_oculatus
ENSCGRG00000004939	Parn	100	85.601	ENSLAFG00000015036	PARN	100	85.601	Loxodonta_africana
ENSCGRG00000004939	Parn	100	81.026	ENSMFAG00000044852	PARN	100	96.610	Macaca_fascicularis
ENSCGRG00000004939	Parn	100	85.670	ENSMMUG00000018849	PARN	100	96.610	Macaca_mulatta
ENSCGRG00000004939	Parn	100	85.826	ENSMNEG00000045108	PARN	100	96.610	Macaca_nemestrina
ENSCGRG00000004939	Parn	100	85.981	ENSMLEG00000031743	PARN	100	96.610	Mandrillus_leucophaeus
ENSCGRG00000004939	Parn	91	72.913	ENSMAMG00000006939	parn	83	72.913	Mastacembelus_armatus
ENSCGRG00000004939	Parn	100	67.610	ENSMZEG00005013590	parn	100	67.296	Maylandia_zebra
ENSCGRG00000004939	Parn	95	78.489	ENSMGAG00000001004	PARN	95	78.489	Meleagris_gallopavo
ENSCGRG00000004939	Parn	100	90.063	ENSMAUG00000008025	Parn	100	90.063	Mesocricetus_auratus
ENSCGRG00000004939	Parn	100	87.167	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSCGRG00000004939	Parn	78	96.304	ENSMOCG00000022211	Parn	100	96.304	Microtus_ochrogaster
ENSCGRG00000004939	Parn	100	66.719	ENSMMOG00000011333	parn	100	66.091	Mola_mola
ENSCGRG00000004939	Parn	78	89.113	ENSMODG00000004915	PARN	99	89.113	Monodelphis_domestica
ENSCGRG00000004939	Parn	84	77.281	ENSMALG00000019426	parn	91	77.281	Monopterus_albus
ENSCGRG00000004939	Parn	100	92.320	MGP_CAROLIEiJ_G0020466	Parn	100	92.320	Mus_caroli
ENSCGRG00000004939	Parn	100	92.640	ENSMUSG00000022685	Parn	100	97.561	Mus_musculus
ENSCGRG00000004939	Parn	51	31.902	ENSMUSG00000073460	Pnldc1	97	30.769	Mus_musculus
ENSCGRG00000004939	Parn	100	92.320	MGP_PahariEiJ_G0016172	Parn	100	92.320	Mus_pahari
ENSCGRG00000004939	Parn	100	92.480	MGP_SPRETEiJ_G0021361	Parn	100	92.480	Mus_spretus
ENSCGRG00000004939	Parn	100	85.759	ENSMPUG00000014464	PARN	100	85.759	Mustela_putorius_furo
ENSCGRG00000004939	Parn	78	88.664	ENSMLUG00000005414	PARN	100	88.664	Myotis_lucifugus
ENSCGRG00000004939	Parn	87	73.514	ENSNBRG00000006805	parn	93	73.514	Neolamprologus_brichardi
ENSCGRG00000004939	Parn	100	85.514	ENSNLEG00000010241	PARN	100	96.610	Nomascus_leucogenys
ENSCGRG00000004939	Parn	91	70.000	ENSMEUG00000008178	-	91	70.000	Notamacropus_eugenii
ENSCGRG00000004939	Parn	99	81.171	ENSOPRG00000012187	PARN	100	81.171	Ochotona_princeps
ENSCGRG00000004939	Parn	100	78.583	ENSODEG00000001617	PARN	100	78.583	Octodon_degus
ENSCGRG00000004939	Parn	100	68.315	ENSONIG00000000151	parn	100	68.315	Oreochromis_niloticus
ENSCGRG00000004939	Parn	60	79.003	ENSOANG00000020155	-	97	79.528	Ornithorhynchus_anatinus
ENSCGRG00000004939	Parn	99	85.063	ENSOCUG00000000322	PARN	100	85.063	Oryctolagus_cuniculus
ENSCGRG00000004939	Parn	91	73.310	ENSORLG00020010313	parn	85	73.310	Oryzias_latipes_hni
ENSCGRG00000004939	Parn	91	72.964	ENSORLG00015000300	parn	85	72.964	Oryzias_latipes_hsok
ENSCGRG00000004939	Parn	100	64.487	ENSOMEG00000019555	parn	97	63.182	Oryzias_melastigma
ENSCGRG00000004939	Parn	78	89.206	ENSOGAG00000014626	PARN	100	89.206	Otolemur_garnettii
ENSCGRG00000004939	Parn	78	91.498	ENSOARG00000007574	PARN	100	91.498	Ovis_aries
ENSCGRG00000004939	Parn	100	85.514	ENSPPAG00000031438	PARN	100	96.610	Pan_paniscus
ENSCGRG00000004939	Parn	100	84.867	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSCGRG00000004939	Parn	100	84.867	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSCGRG00000004939	Parn	100	85.514	ENSPTRG00000007792	PARN	100	96.610	Pan_troglodytes
ENSCGRG00000004939	Parn	100	82.710	ENSPANG00000020099	PARN	100	96.610	Papio_anubis
ENSCGRG00000004939	Parn	91	73.565	ENSPKIG00000022807	parn	91	68.847	Paramormyrops_kingsleyae
ENSCGRG00000004939	Parn	95	81.518	ENSPSIG00000014804	PARN	100	78.720	Pelodiscus_sinensis
ENSCGRG00000004939	Parn	87	72.152	ENSPMGG00000014431	parn	76	72.152	Periophthalmus_magnuspinnatus
ENSCGRG00000004939	Parn	100	92.160	ENSPEMG00000018439	Parn	100	92.160	Peromyscus_maniculatus_bairdii
ENSCGRG00000004939	Parn	82	65.835	ENSPMAG00000003956	parn	99	65.835	Petromyzon_marinus
ENSCGRG00000004939	Parn	66	80.851	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSCGRG00000004939	Parn	84	76.493	ENSPFOG00000012823	parn	83	73.183	Poecilia_formosa
ENSCGRG00000004939	Parn	84	76.679	ENSPLAG00000006395	parn	83	73.356	Poecilia_latipinna
ENSCGRG00000004939	Parn	84	76.679	ENSPMEG00000007711	parn	83	73.356	Poecilia_mexicana
ENSCGRG00000004939	Parn	84	76.493	ENSPREG00000000147	parn	83	73.183	Poecilia_reticulata
ENSCGRG00000004939	Parn	100	85.248	ENSPPYG00000007123	PARN	100	85.248	Pongo_abelii
ENSCGRG00000004939	Parn	95	74.092	ENSPCAG00000001741	PARN	100	74.092	Procavia_capensis
ENSCGRG00000004939	Parn	100	84.507	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSCGRG00000004939	Parn	99	80.854	ENSPVAG00000002547	PARN	100	80.854	Pteropus_vampyrus
ENSCGRG00000004939	Parn	100	65.149	ENSPNYG00000006835	parn	92	71.095	Pundamilia_nyererei
ENSCGRG00000004939	Parn	83	72.106	ENSPNAG00000018905	parn	85	72.106	Pygocentrus_nattereri
ENSCGRG00000004939	Parn	51	31.902	ENSRNOG00000023140	Pnldc1	89	30.154	Rattus_norvegicus
ENSCGRG00000004939	Parn	100	89.269	ENSRNOG00000002912	Parn	100	94.059	Rattus_norvegicus
ENSCGRG00000004939	Parn	52	82.440	ENSRBIG00000018726	PARN	100	82.440	Rhinopithecus_bieti
ENSCGRG00000004939	Parn	52	82.440	ENSRROG00000011162	-	100	82.440	Rhinopithecus_roxellana
ENSCGRG00000004939	Parn	100	83.645	ENSSBOG00000034726	PARN	100	96.610	Saimiri_boliviensis_boliviensis
ENSCGRG00000004939	Parn	66	87.560	ENSSHAG00000008493	PARN	94	87.560	Sarcophilus_harrisii
ENSCGRG00000004939	Parn	63	30.024	ENSSHAG00000015192	PNLDC1	67	30.024	Sarcophilus_harrisii
ENSCGRG00000004939	Parn	91	74.564	ENSSFOG00015014165	parn	94	72.822	Scleropages_formosus
ENSCGRG00000004939	Parn	100	62.461	ENSSMAG00000000685	parn	100	61.860	Scophthalmus_maximus
ENSCGRG00000004939	Parn	90	72.964	ENSSDUG00000014555	parn	83	73.310	Seriola_dumerili
ENSCGRG00000004939	Parn	81	89.862	ENSSARG00000014339	PARN	89	89.862	Sorex_araneus
ENSCGRG00000004939	Parn	100	79.563	ENSSPUG00000007719	PARN	100	79.563	Sphenodon_punctatus
ENSCGRG00000004939	Parn	91	73.621	ENSSPAG00000007095	parn	86	72.659	Stegastes_partitus
ENSCGRG00000004939	Parn	100	84.555	ENSSSCG00000007878	PARN	89	84.555	Sus_scrofa
ENSCGRG00000004939	Parn	55	31.638	ENSTGUG00000011418	PNLDC1	69	30.791	Taeniopygia_guttata
ENSCGRG00000004939	Parn	99	78.707	ENSTGUG00000004971	PARN	99	78.707	Taeniopygia_guttata
ENSCGRG00000004939	Parn	100	67.762	ENSTNIG00000008252	parn	100	67.919	Tetraodon_nigroviridis
ENSCGRG00000004939	Parn	91	73.540	ENSTBEG00000010407	PARN	100	73.540	Tupaia_belangeri
ENSCGRG00000004939	Parn	99	79.747	ENSTTRG00000002843	PARN	100	79.747	Tursiops_truncatus
ENSCGRG00000004939	Parn	74	73.134	ENSUAMG00000008283	PARN	96	73.134	Ursus_americanus
ENSCGRG00000004939	Parn	100	85.335	ENSUMAG00000004527	PARN	100	85.335	Ursus_maritimus
ENSCGRG00000004939	Parn	96	82.114	ENSVPAG00000008968	PARN	97	82.167	Vicugna_pacos
ENSCGRG00000004939	Parn	100	84.867	ENSVVUG00000019509	PARN	100	84.867	Vulpes_vulpes
ENSCGRG00000004939	Parn	100	71.495	ENSXETG00000010994	parn	100	79.886	Xenopus_tropicalis
ENSCGRG00000004939	Parn	89	69.420	ENSXCOG00000015990	parn	96	68.858	Xiphophorus_couchianus
ENSCGRG00000004939	Parn	91	72.165	ENSXMAG00000014783	parn	83	72.165	Xiphophorus_maculatus