EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000005005 (Gene tree)
Gene ID: -
Gene Symbol: Snrpc
Alias: Snrp1c|U1-C
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 10449 bases
Position: chrJH000648.1:455307-465755
Accession: 100759153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000006869	zf-U1	PF06220.12	6.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000006981	-	837	XM_007646803	ENSCGRP00000006869	159 (aa)	XP_007644993	-

Gene Model

Click here to download ENSCGRG00000005005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000005005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000005005	Snrpc	62	82.653	ENSCGRG00000012679	-	60	81.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000005005	Snrpc	100	98.742	ENSG00000124562	SNRPC	100	99.153	Homo_sapiens
ENSCGRG00000005005	Snrpc	100	98.742	ENSAMEG00000000963	SNRPC	88	98.742	Ailuropoda_melanoleuca
ENSCGRG00000005005	Snrpc	100	96.226	ENSACAG00000015721	SNRPC	88	96.226	Anolis_carolinensis
ENSCGRG00000005005	Snrpc	99	74.522	ENSANAG00000021444	-	61	79.167	Aotus_nancymaae
ENSCGRG00000005005	Snrpc	100	98.742	ENSANAG00000019696	-	100	97.484	Aotus_nancymaae
ENSCGRG00000005005	Snrpc	99	94.268	ENSANAG00000019157	-	100	93.082	Aotus_nancymaae
ENSCGRG00000005005	Snrpc	100	96.855	ENSANAG00000007843	-	100	96.855	Aotus_nancymaae
ENSCGRG00000005005	Snrpc	99	87.898	ENSANAG00000019726	-	92	87.421	Aotus_nancymaae
ENSCGRG00000005005	Snrpc	99	85.987	ENSANAG00000021026	-	100	77.987	Aotus_nancymaae
ENSCGRG00000005005	Snrpc	99	91.083	ENSANAG00000020588	-	91	91.667	Aotus_nancymaae
ENSCGRG00000005005	Snrpc	99	83.439	ENSAMXG00000032641	snrpc	87	82.390	Astyanax_mexicanus
ENSCGRG00000005005	Snrpc	100	97.484	ENSBTAG00000024549	SNRPC	100	97.484	Bos_taurus
ENSCGRG00000005005	Snrpc	100	98.742	ENSCJAG00000015321	-	100	97.484	Callithrix_jacchus
ENSCGRG00000005005	Snrpc	99	96.178	ENSCJAG00000041822	-	100	94.969	Callithrix_jacchus
ENSCGRG00000005005	Snrpc	99	97.452	ENSCJAG00000043055	-	99	97.452	Callithrix_jacchus
ENSCGRG00000005005	Snrpc	99	87.342	ENSCAFG00000028988	-	100	86.875	Canis_familiaris
ENSCGRG00000005005	Snrpc	73	98.276	ENSCAFG00000001231	-	91	98.276	Canis_familiaris
ENSCGRG00000005005	Snrpc	99	94.268	ENSCAFG00000031775	-	100	93.082	Canis_familiaris
ENSCGRG00000005005	Snrpc	99	77.070	ENSCAFG00000025525	-	100	76.101	Canis_familiaris
ENSCGRG00000005005	Snrpc	100	97.484	ENSCAFG00020005945	-	100	97.484	Canis_lupus_dingo
ENSCGRG00000005005	Snrpc	100	86.164	ENSCAFG00020009944	-	91	86.164	Canis_lupus_dingo
ENSCGRG00000005005	Snrpc	100	94.340	ENSCAFG00020005758	-	100	94.340	Canis_lupus_dingo
ENSCGRG00000005005	Snrpc	99	77.273	ENSCAFG00020026577	-	100	82.584	Canis_lupus_dingo
ENSCGRG00000005005	Snrpc	99	94.268	ENSCAFG00020017383	-	100	93.082	Canis_lupus_dingo
ENSCGRG00000005005	Snrpc	100	96.855	ENSCHIG00000012087	-	100	96.855	Capra_hircus
ENSCGRG00000005005	Snrpc	100	97.484	ENSTSYG00000011216	-	100	97.484	Carlito_syrichta
ENSCGRG00000005005	Snrpc	99	81.529	ENSTSYG00000025721	-	100	72.327	Carlito_syrichta
ENSCGRG00000005005	Snrpc	98	87.821	ENSTSYG00000029745	-	62	91.057	Carlito_syrichta
ENSCGRG00000005005	Snrpc	89	99.296	ENSCAPG00000005161	SNRPC	100	99.296	Cavia_aperea
ENSCGRG00000005005	Snrpc	100	97.484	ENSCPOG00000008563	SNRPC	100	97.484	Cavia_porcellus
ENSCGRG00000005005	Snrpc	100	89.937	ENSCCAG00000022751	-	97	89.937	Cebus_capucinus
ENSCGRG00000005005	Snrpc	98	79.487	ENSCCAG00000022209	-	95	79.487	Cebus_capucinus
ENSCGRG00000005005	Snrpc	99	92.994	ENSCCAG00000036059	-	89	91.824	Cebus_capucinus
ENSCGRG00000005005	Snrpc	99	68.790	ENSCCAG00000028293	-	63	86.585	Cebus_capucinus
ENSCGRG00000005005	Snrpc	97	80.000	ENSCCAG00000026624	-	66	73.885	Cebus_capucinus
ENSCGRG00000005005	Snrpc	100	98.742	ENSCATG00000035787	SNRPC	100	97.484	Cercocebus_atys
ENSCGRG00000005005	Snrpc	100	97.484	ENSCLAG00000016920	SNRPC	100	97.484	Chinchilla_lanigera
ENSCGRG00000005005	Snrpc	98	81.410	ENSCLAG00000010242	-	96	81.410	Chinchilla_lanigera
ENSCGRG00000005005	Snrpc	99	77.841	ENSCSAG00000009821	SNRPC	100	83.146	Chlorocebus_sabaeus
ENSCGRG00000005005	Snrpc	100	82.390	ENSCHOG00000011439	SNRPC	89	82.390	Choloepus_hoffmanni
ENSCGRG00000005005	Snrpc	99	96.178	ENSCPBG00000027142	SNRPC	100	94.969	Chrysemys_picta_bellii
ENSCGRG00000005005	Snrpc	74	56.198	ENSCING00000021229	ci-zf(matrin)-4	51	80.645	Ciona_intestinalis
ENSCGRG00000005005	Snrpc	100	97.484	ENSCANG00000028035	SNRPC	100	97.484	Colobus_angolensis_palliatus
ENSCGRG00000005005	Snrpc	99	99.363	ENSCGRG00001009011	-	99	99.363	Cricetulus_griseus_chok1gshd
ENSCGRG00000005005	Snrpc	99	87.261	ENSCGRG00001021483	-	100	79.874	Cricetulus_griseus_chok1gshd
ENSCGRG00000005005	Snrpc	74	97.436	ENSDNOG00000042403	-	93	97.436	Dasypus_novemcinctus
ENSCGRG00000005005	Snrpc	100	96.226	ENSDNOG00000034699	-	99	96.226	Dasypus_novemcinctus
ENSCGRG00000005005	Snrpc	100	81.761	ENSDORG00000005955	Snrpc	67	79.874	Dipodomys_ordii
ENSCGRG00000005005	Snrpc	94	77.852	ENSDORG00000029823	-	56	90.909	Dipodomys_ordii
ENSCGRG00000005005	Snrpc	97	90.909	ENSETEG00000011265	-	100	89.744	Echinops_telfairi
ENSCGRG00000005005	Snrpc	52	96.386	ENSETEG00000008756	-	81	96.386	Echinops_telfairi
ENSCGRG00000005005	Snrpc	97	94.805	ENSETEG00000008268	-	100	93.590	Echinops_telfairi
ENSCGRG00000005005	Snrpc	100	97.484	ENSEASG00005021007	SNRPC	100	97.484	Equus_asinus_asinus
ENSCGRG00000005005	Snrpc	100	97.484	ENSECAG00000026848	SNRPC	100	97.484	Equus_caballus
ENSCGRG00000005005	Snrpc	99	80.255	ENSEEUG00000014633	SNRPC	90	79.747	Erinaceus_europaeus
ENSCGRG00000005005	Snrpc	100	98.742	ENSFCAG00000044077	-	100	97.484	Felis_catus
ENSCGRG00000005005	Snrpc	99	91.720	ENSFCAG00000031775	-	72	95.935	Felis_catus
ENSCGRG00000005005	Snrpc	100	96.226	ENSFALG00000003756	SNRPC	100	96.226	Ficedula_albicollis
ENSCGRG00000005005	Snrpc	100	97.484	ENSFDAG00000018111	SNRPC	100	97.484	Fukomys_damarensis
ENSCGRG00000005005	Snrpc	99	95.570	ENSGALG00000002773	SNRPC	100	94.375	Gallus_gallus
ENSCGRG00000005005	Snrpc	99	96.178	ENSGAGG00000003063	SNRPC	100	94.969	Gopherus_agassizii
ENSCGRG00000005005	Snrpc	100	97.484	ENSGGOG00000012499	SNRPC	100	97.484	Gorilla_gorilla
ENSCGRG00000005005	Snrpc	99	79.618	ENSHGLG00000017741	-	100	76.101	Heterocephalus_glaber_female
ENSCGRG00000005005	Snrpc	100	97.484	ENSHGLG00000013981	SNRPC	99	99.359	Heterocephalus_glaber_female
ENSCGRG00000005005	Snrpc	80	74.016	ENSHGLG00000005871	-	100	73.585	Heterocephalus_glaber_female
ENSCGRG00000005005	Snrpc	99	94.268	ENSHGLG00100017764	-	100	93.082	Heterocephalus_glaber_male
ENSCGRG00000005005	Snrpc	99	79.618	ENSHGLG00100010786	-	100	76.101	Heterocephalus_glaber_male
ENSCGRG00000005005	Snrpc	100	97.484	ENSHGLG00100009478	SNRPC	99	99.359	Heterocephalus_glaber_male
ENSCGRG00000005005	Snrpc	99	84.076	ENSIPUG00000024851	snrpc	100	83.019	Ictalurus_punctatus
ENSCGRG00000005005	Snrpc	100	97.484	ENSSTOG00000013786	SNRPC	100	97.484	Ictidomys_tridecemlineatus
ENSCGRG00000005005	Snrpc	99	99.363	ENSJJAG00000021741	Snrpc	99	99.363	Jaculus_jaculus
ENSCGRG00000005005	Snrpc	100	88.750	ENSLACG00000013753	SNRPC	89	90.625	Latimeria_chalumnae
ENSCGRG00000005005	Snrpc	100	97.484	ENSLAFG00000013534	SNRPC	100	97.484	Loxodonta_africana
ENSCGRG00000005005	Snrpc	100	96.855	ENSMFAG00000030525	-	100	96.855	Macaca_fascicularis
ENSCGRG00000005005	Snrpc	100	97.484	ENSMFAG00000031764	-	100	97.484	Macaca_fascicularis
ENSCGRG00000005005	Snrpc	99	89.809	ENSMMUG00000045425	-	100	88.679	Macaca_mulatta
ENSCGRG00000005005	Snrpc	100	96.226	ENSMMUG00000039415	-	100	96.226	Macaca_mulatta
ENSCGRG00000005005	Snrpc	98	99.359	ENSMMUG00000000869	-	95	99.359	Macaca_mulatta
ENSCGRG00000005005	Snrpc	100	98.742	ENSMNEG00000032731	SNRPC	100	97.484	Macaca_nemestrina
ENSCGRG00000005005	Snrpc	100	98.742	ENSMLEG00000033916	-	100	97.484	Mandrillus_leucophaeus
ENSCGRG00000005005	Snrpc	97	91.613	ENSMLEG00000040224	-	89	91.613	Mandrillus_leucophaeus
ENSCGRG00000005005	Snrpc	98	96.154	ENSMGAG00000006054	SNRPC	100	94.340	Meleagris_gallopavo
ENSCGRG00000005005	Snrpc	100	98.113	ENSMICG00000007339	-	99	98.089	Microcebus_murinus
ENSCGRG00000005005	Snrpc	100	84.906	ENSMICG00000036552	-	88	78.616	Microcebus_murinus
ENSCGRG00000005005	Snrpc	100	96.855	ENSMICG00000032183	-	100	96.855	Microcebus_murinus
ENSCGRG00000005005	Snrpc	99	86.624	ENSMICG00000009130	-	100	86.164	Microcebus_murinus
ENSCGRG00000005005	Snrpc	99	99.363	ENSMOCG00000017609	Snrpc	99	99.363	Microtus_ochrogaster
ENSCGRG00000005005	Snrpc	100	96.226	ENSMODG00000013904	-	100	96.226	Monodelphis_domestica
ENSCGRG00000005005	Snrpc	99	99.363	MGP_CAROLIEiJ_G0021308	Snrpc	99	99.363	Mus_caroli
ENSCGRG00000005005	Snrpc	99	99.363	ENSMUSG00000024217	Snrpc	99	99.363	Mus_musculus
ENSCGRG00000005005	Snrpc	73	99.138	MGP_SPRETEiJ_G0022221	-	98	99.138	Mus_spretus
ENSCGRG00000005005	Snrpc	100	98.742	ENSMPUG00000003210	SNRPC	100	98.742	Mustela_putorius_furo
ENSCGRG00000005005	Snrpc	100	98.742	ENSMLUG00000002488	SNRPC	100	98.742	Myotis_lucifugus
ENSCGRG00000005005	Snrpc	99	99.363	ENSNGAG00000019686	Snrpc	99	99.363	Nannospalax_galili
ENSCGRG00000005005	Snrpc	100	98.742	ENSNLEG00000034810	SNRPC	100	97.484	Nomascus_leucogenys
ENSCGRG00000005005	Snrpc	89	98.592	ENSMEUG00000009300	SNRPC	100	98.592	Notamacropus_eugenii
ENSCGRG00000005005	Snrpc	100	97.484	ENSODEG00000020370	-	100	97.484	Octodon_degus
ENSCGRG00000005005	Snrpc	76	92.562	ENSODEG00000006008	-	88	91.057	Octodon_degus
ENSCGRG00000005005	Snrpc	100	96.855	ENSODEG00000020201	-	100	96.855	Octodon_degus
ENSCGRG00000005005	Snrpc	100	96.226	ENSODEG00000019633	-	100	96.226	Octodon_degus
ENSCGRG00000005005	Snrpc	100	97.484	ENSODEG00000017080	-	100	97.484	Octodon_degus
ENSCGRG00000005005	Snrpc	100	97.484	ENSODEG00000018985	-	100	97.484	Octodon_degus
ENSCGRG00000005005	Snrpc	91	94.595	ENSOANG00000003405	SNRPC	100	94.595	Ornithorhynchus_anatinus
ENSCGRG00000005005	Snrpc	100	97.484	ENSOCUG00000026668	-	100	97.484	Oryctolagus_cuniculus
ENSCGRG00000005005	Snrpc	99	97.452	ENSOCUG00000026430	-	98	97.452	Oryctolagus_cuniculus
ENSCGRG00000005005	Snrpc	99	96.178	ENSOCUG00000023292	-	100	94.969	Oryctolagus_cuniculus
ENSCGRG00000005005	Snrpc	99	96.815	ENSOGAG00000026269	-	100	95.597	Otolemur_garnettii
ENSCGRG00000005005	Snrpc	100	98.113	ENSOGAG00000008755	-	89	98.113	Otolemur_garnettii
ENSCGRG00000005005	Snrpc	96	83.007	ENSOGAG00000028405	-	99	78.431	Otolemur_garnettii
ENSCGRG00000005005	Snrpc	100	97.484	ENSOARG00000010823	SNRPC	100	97.484	Ovis_aries
ENSCGRG00000005005	Snrpc	100	97.484	ENSPPAG00000043871	SNRPC	100	97.484	Pan_paniscus
ENSCGRG00000005005	Snrpc	96	60.390	ENSPPRG00000016017	-	86	54.902	Panthera_pardus
ENSCGRG00000005005	Snrpc	100	98.742	ENSPPRG00000008647	-	100	97.484	Panthera_pardus
ENSCGRG00000005005	Snrpc	100	98.742	ENSPTIG00000021867	-	100	97.484	Panthera_tigris_altaica
ENSCGRG00000005005	Snrpc	96	62.092	ENSPTIG00000013329	-	62	77.895	Panthera_tigris_altaica
ENSCGRG00000005005	Snrpc	100	97.484	ENSPTRG00000018070	SNRPC	100	97.484	Pan_troglodytes
ENSCGRG00000005005	Snrpc	100	98.742	ENSPANG00000022802	-	100	97.484	Papio_anubis
ENSCGRG00000005005	Snrpc	99	88.535	ENSPANG00000018228	-	94	87.421	Papio_anubis
ENSCGRG00000005005	Snrpc	99	95.570	ENSPSIG00000004876	SNRPC	77	95.570	Pelodiscus_sinensis
ENSCGRG00000005005	Snrpc	99	87.261	ENSPEMG00000002763	-	100	83.648	Peromyscus_maniculatus_bairdii
ENSCGRG00000005005	Snrpc	99	99.363	ENSPEMG00000010773	Snrpc	99	99.363	Peromyscus_maniculatus_bairdii
ENSCGRG00000005005	Snrpc	51	97.531	ENSPPYG00000029902	-	63	95.161	Pongo_abelii
ENSCGRG00000005005	Snrpc	100	98.113	ENSPCAG00000016885	SNRPC	91	98.113	Procavia_capensis
ENSCGRG00000005005	Snrpc	100	98.742	ENSPCOG00000004904	SNRPC	100	97.484	Propithecus_coquereli
ENSCGRG00000005005	Snrpc	100	98.113	ENSPVAG00000015597	SNRPC	88	98.113	Pteropus_vampyrus
ENSCGRG00000005005	Snrpc	99	99.363	ENSRNOG00000000493	Snrpc	99	99.363	Rattus_norvegicus
ENSCGRG00000005005	Snrpc	100	96.855	ENSRBIG00000022998	-	100	96.855	Rhinopithecus_bieti
ENSCGRG00000005005	Snrpc	100	98.742	ENSRBIG00000037567	-	100	97.484	Rhinopithecus_bieti
ENSCGRG00000005005	Snrpc	97	90.968	ENSRBIG00000036353	-	83	88.679	Rhinopithecus_bieti
ENSCGRG00000005005	Snrpc	100	96.855	ENSRBIG00000014819	-	100	96.855	Rhinopithecus_bieti
ENSCGRG00000005005	Snrpc	100	98.742	ENSRROG00000041300	SNRPC	100	97.484	Rhinopithecus_roxellana
ENSCGRG00000005005	Snrpc	93	82.432	ENSSBOG00000032361	-	75	81.148	Saimiri_boliviensis_boliviensis
ENSCGRG00000005005	Snrpc	97	81.169	ENSSBOG00000023189	-	91	80.128	Saimiri_boliviensis_boliviensis
ENSCGRG00000005005	Snrpc	100	98.742	ENSSBOG00000031528	-	100	97.484	Saimiri_boliviensis_boliviensis
ENSCGRG00000005005	Snrpc	98	80.769	ENSSBOG00000032882	-	93	80.769	Saimiri_boliviensis_boliviensis
ENSCGRG00000005005	Snrpc	99	98.726	ENSSHAG00000000945	-	87	98.726	Sarcophilus_harrisii
ENSCGRG00000005005	Snrpc	100	76.101	ENSSARG00000008970	SNRPC	89	76.101	Sorex_araneus
ENSCGRG00000005005	Snrpc	99	96.815	ENSSPUG00000002502	SNRPC	100	95.597	Sphenodon_punctatus
ENSCGRG00000005005	Snrpc	100	97.484	ENSSSCG00000001531	SNRPC	100	97.484	Sus_scrofa
ENSCGRG00000005005	Snrpc	99	98.089	ENSTGUG00000001773	SNRPC	99	98.089	Taeniopygia_guttata
ENSCGRG00000005005	Snrpc	97	90.909	ENSTBEG00000013022	-	100	89.744	Tupaia_belangeri
ENSCGRG00000005005	Snrpc	97	72.078	ENSTBEG00000015356	-	68	87.500	Tupaia_belangeri
ENSCGRG00000005005	Snrpc	89	72.535	ENSTBEG00000016759	-	79	72.535	Tupaia_belangeri
ENSCGRG00000005005	Snrpc	100	98.742	ENSTTRG00000007827	SNRPC	87	98.742	Tursiops_truncatus
ENSCGRG00000005005	Snrpc	74	97.436	ENSUAMG00000014125	SNRPC	79	97.436	Ursus_americanus
ENSCGRG00000005005	Snrpc	99	88.068	ENSUMAG00000010869	SNRPC	99	88.068	Ursus_maritimus
ENSCGRG00000005005	Snrpc	89	73.944	ENSVPAG00000003106	SNRPC	79	73.944	Vicugna_pacos
ENSCGRG00000005005	Snrpc	97	94.156	ENSVVUG00000010467	-	87	94.231	Vulpes_vulpes
ENSCGRG00000005005	Snrpc	100	96.226	ENSVVUG00000021947	-	100	96.226	Vulpes_vulpes
ENSCGRG00000005005	Snrpc	99	88.535	ENSXETG00000024721	snrpc	100	87.421	Xenopus_tropicalis