EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000005129 (Gene tree)
Gene ID: -
Gene Symbol: Prpf8
Alias: D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 21724 bases
Position: chrJH003379.1:249-21972
Accession: 107976990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000007053	RRM_4	PF10598.9	2.3e-48	1	1
ENSCGRP00000007053	U5_2-snRNA_bdg	PF10597.9	1.7e-17	1	1
ENSCGRP00000007053	U6-snRNA_bdg	PF10596.9	8.9e-90	1	1
ENSCGRP00000007053	PROCN	PF08083.11	9.6e-235	1	1
ENSCGRP00000007053	PRP8_domainIV	PF12134.8	2.6e-41	1	1
ENSCGRP00000007053	PROCT	PF08084.11	7.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000007169	-	5058	XM_016963682	ENSCGRP00000007053	1685 (aa)	XP_016819171	-

Gene Model

Click here to download ENSCGRG00000005129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000005129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000005129	Prpf8	100	99.409	ENSG00000174231	PRPF8	82	100.000	Homo_sapiens
ENSCGRG00000005129	Prpf8	100	99.409	ENSAPOG00000010079	prpf8	73	99.409	Acanthochromis_polyacanthus
ENSCGRG00000005129	Prpf8	100	99.409	ENSAMEG00000007940	PRPF8	74	99.409	Ailuropoda_melanoleuca
ENSCGRG00000005129	Prpf8	100	99.604	ENSACIG00000018280	prpf8	73	99.604	Amphilophus_citrinellus
ENSCGRG00000005129	Prpf8	100	99.409	ENSAOCG00000010725	prpf8	73	99.409	Amphiprion_ocellaris
ENSCGRG00000005129	Prpf8	100	99.409	ENSAPEG00000014397	prpf8	73	99.409	Amphiprion_percula
ENSCGRG00000005129	Prpf8	99	99.409	ENSATEG00000010062	prpf8	73	99.409	Anabas_testudineus
ENSCGRG00000005129	Prpf8	100	99.409	ENSAPLG00000010357	PRPF8	76	99.409	Anas_platyrhynchos
ENSCGRG00000005129	Prpf8	88	96.414	ENSACAG00000014784	PRPF8	78	96.414	Anolis_carolinensis
ENSCGRG00000005129	Prpf8	100	99.409	ENSANAG00000032629	PRPF8	74	99.409	Aotus_nancymaae
ENSCGRG00000005129	Prpf8	100	99.213	ENSACLG00000020858	prpf8	74	99.213	Astatotilapia_calliptera
ENSCGRG00000005129	Prpf8	100	99.409	ENSAMXG00000020291	prpf8	74	99.409	Astyanax_mexicanus
ENSCGRG00000005129	Prpf8	100	99.409	ENSBTAG00000011488	PRPF8	74	99.409	Bos_taurus
ENSCGRG00000005129	Prpf8	100	92.731	WBGene00004187	prp-8	74	92.731	Caenorhabditis_elegans
ENSCGRG00000005129	Prpf8	100	99.409	ENSCJAG00000001911	PRPF8	74	99.409	Callithrix_jacchus
ENSCGRG00000005129	Prpf8	100	99.409	ENSCAFG00000019221	PRPF8	74	99.409	Canis_familiaris
ENSCGRG00000005129	Prpf8	100	99.409	ENSCAFG00020009943	PRPF8	77	99.409	Canis_lupus_dingo
ENSCGRG00000005129	Prpf8	100	99.409	ENSCHIG00000017499	PRPF8	74	99.409	Capra_hircus
ENSCGRG00000005129	Prpf8	100	99.409	ENSTSYG00000014120	PRPF8	74	99.409	Carlito_syrichta
ENSCGRG00000005129	Prpf8	100	99.409	ENSCAPG00000009459	PRPF8	76	99.409	Cavia_aperea
ENSCGRG00000005129	Prpf8	100	99.409	ENSCPOG00000010379	PRPF8	74	99.409	Cavia_porcellus
ENSCGRG00000005129	Prpf8	100	99.409	ENSCCAG00000031983	-	74	99.409	Cebus_capucinus
ENSCGRG00000005129	Prpf8	100	99.409	ENSCATG00000038595	PRPF8	74	99.409	Cercocebus_atys
ENSCGRG00000005129	Prpf8	100	99.409	ENSCLAG00000004388	PRPF8	74	99.409	Chinchilla_lanigera
ENSCGRG00000005129	Prpf8	100	99.409	ENSCSAG00000013929	PRPF8	74	99.409	Chlorocebus_sabaeus
ENSCGRG00000005129	Prpf8	77	98.913	ENSCHOG00000008590	PRPF8	61	98.913	Choloepus_hoffmanni
ENSCGRG00000005129	Prpf8	100	99.409	ENSCPBG00000020409	PRPF8	74	99.409	Chrysemys_picta_bellii
ENSCGRG00000005129	Prpf8	100	95.000	ENSCSAVG00000007825	-	75	94.027	Ciona_savignyi
ENSCGRG00000005129	Prpf8	100	99.409	ENSCANG00000043088	PRPF8	74	99.409	Colobus_angolensis_palliatus
ENSCGRG00000005129	Prpf8	100	99.409	ENSCSEG00000007905	prpf8	73	99.409	Cynoglossus_semilaevis
ENSCGRG00000005129	Prpf8	100	99.016	ENSDARG00000026180	prpf8	73	99.016	Danio_rerio
ENSCGRG00000005129	Prpf8	90	99.409	ENSDNOG00000018471	PRPF8	71	99.409	Dasypus_novemcinctus
ENSCGRG00000005129	Prpf8	82	100.000	ENSDORG00000006185	Prpf8	73	100.000	Dipodomys_ordii
ENSCGRG00000005129	Prpf8	100	96.457	FBgn0033688	Prp8	72	96.457	Drosophila_melanogaster
ENSCGRG00000005129	Prpf8	100	97.638	ENSETEG00000017592	PRPF8	73	97.638	Echinops_telfairi
ENSCGRG00000005129	Prpf8	100	97.244	ENSEBUG00000006548	prpf8	73	97.244	Eptatretus_burgeri
ENSCGRG00000005129	Prpf8	100	99.409	ENSEASG00005009514	PRPF8	79	99.711	Equus_asinus_asinus
ENSCGRG00000005129	Prpf8	100	99.409	ENSECAG00000021318	PRPF8	76	99.409	Equus_caballus
ENSCGRG00000005129	Prpf8	67	100.000	ENSEEUG00000012120	-	50	100.000	Erinaceus_europaeus
ENSCGRG00000005129	Prpf8	97	98.819	ENSELUG00000007120	prpf8	72	98.819	Esox_lucius
ENSCGRG00000005129	Prpf8	100	99.409	ENSFCAG00000006297	PRPF8	74	99.409	Felis_catus
ENSCGRG00000005129	Prpf8	100	99.409	ENSFALG00000006628	PRPF8	74	99.409	Ficedula_albicollis
ENSCGRG00000005129	Prpf8	100	99.409	ENSFDAG00000004711	PRPF8	74	99.409	Fukomys_damarensis
ENSCGRG00000005129	Prpf8	100	99.213	ENSFHEG00000021084	prpf8	73	99.213	Fundulus_heteroclitus
ENSCGRG00000005129	Prpf8	100	98.819	ENSGMOG00000002028	prpf8	73	98.819	Gadus_morhua
ENSCGRG00000005129	Prpf8	100	99.409	ENSGALG00000002943	PRPF8	74	99.409	Gallus_gallus
ENSCGRG00000005129	Prpf8	100	99.409	ENSGAFG00000010337	prpf8	73	99.409	Gambusia_affinis
ENSCGRG00000005129	Prpf8	100	99.409	ENSGACG00000008504	prpf8	74	99.409	Gasterosteus_aculeatus
ENSCGRG00000005129	Prpf8	100	99.409	ENSGAGG00000008350	PRPF8	74	99.409	Gopherus_agassizii
ENSCGRG00000005129	Prpf8	100	99.409	ENSGGOG00000005516	PRPF8	74	99.409	Gorilla_gorilla
ENSCGRG00000005129	Prpf8	100	99.213	ENSHBUG00000016192	prpf8	74	99.213	Haplochromis_burtoni
ENSCGRG00000005129	Prpf8	100	99.409	ENSHGLG00000012029	PRPF8	74	99.409	Heterocephalus_glaber_female
ENSCGRG00000005129	Prpf8	100	99.409	ENSHGLG00100016494	PRPF8	74	99.409	Heterocephalus_glaber_male
ENSCGRG00000005129	Prpf8	100	99.213	ENSHCOG00000016414	prpf8	73	99.213	Hippocampus_comes
ENSCGRG00000005129	Prpf8	100	99.409	ENSIPUG00000023230	prpf8	73	99.409	Ictalurus_punctatus
ENSCGRG00000005129	Prpf8	100	99.409	ENSSTOG00000005128	PRPF8	74	99.409	Ictidomys_tridecemlineatus
ENSCGRG00000005129	Prpf8	100	99.533	ENSJJAG00000021159	Prpf8	73	99.533	Jaculus_jaculus
ENSCGRG00000005129	Prpf8	100	99.016	ENSKMAG00000016118	prpf8	73	99.016	Kryptolebias_marmoratus
ENSCGRG00000005129	Prpf8	100	99.016	ENSLBEG00000026903	prpf8	73	99.016	Labrus_bergylta
ENSCGRG00000005129	Prpf8	93	99.213	ENSLACG00000010479	PRPF8	77	99.213	Latimeria_chalumnae
ENSCGRG00000005129	Prpf8	100	99.016	ENSLOCG00000005409	prpf8	74	97.303	Lepisosteus_oculatus
ENSCGRG00000005129	Prpf8	100	99.409	ENSLAFG00000015445	PRPF8	74	99.409	Loxodonta_africana
ENSCGRG00000005129	Prpf8	100	99.409	ENSMFAG00000039995	PRPF8	74	99.409	Macaca_fascicularis
ENSCGRG00000005129	Prpf8	100	99.409	ENSMMUG00000004820	PRPF8	74	99.409	Macaca_mulatta
ENSCGRG00000005129	Prpf8	100	99.409	ENSMNEG00000035713	PRPF8	74	99.409	Macaca_nemestrina
ENSCGRG00000005129	Prpf8	100	99.409	ENSMLEG00000037937	PRPF8	74	99.409	Mandrillus_leucophaeus
ENSCGRG00000005129	Prpf8	100	99.409	ENSMAMG00000008919	prpf8	73	99.409	Mastacembelus_armatus
ENSCGRG00000005129	Prpf8	100	99.213	ENSMZEG00005015073	prpf8	73	99.213	Maylandia_zebra
ENSCGRG00000005129	Prpf8	100	99.409	ENSMGAG00000004769	PRPF8	74	99.409	Meleagris_gallopavo
ENSCGRG00000005129	Prpf8	100	99.533	ENSMICG00000010320	PRPF8	74	99.533	Microcebus_murinus
ENSCGRG00000005129	Prpf8	100	99.533	ENSMOCG00000016838	Prpf8	74	99.533	Microtus_ochrogaster
ENSCGRG00000005129	Prpf8	100	99.213	ENSMMOG00000011887	prpf8	74	99.213	Mola_mola
ENSCGRG00000005129	Prpf8	100	99.409	ENSMODG00000010480	PRPF8	74	99.409	Monodelphis_domestica
ENSCGRG00000005129	Prpf8	100	93.458	ENSMALG00000003558	prpf8	74	93.458	Monopterus_albus
ENSCGRG00000005129	Prpf8	100	99.533	MGP_CAROLIEiJ_G0016740	Prpf8	78	99.753	Mus_caroli
ENSCGRG00000005129	Prpf8	100	99.533	ENSMUSG00000020850	Prpf8	78	99.753	Mus_musculus
ENSCGRG00000005129	Prpf8	100	99.409	MGP_PahariEiJ_G0017877	Prpf8	78	99.630	Mus_pahari
ENSCGRG00000005129	Prpf8	100	99.533	MGP_SPRETEiJ_G0017583	Prpf8	78	99.753	Mus_spretus
ENSCGRG00000005129	Prpf8	100	99.409	ENSMPUG00000013227	PRPF8	74	99.409	Mustela_putorius_furo
ENSCGRG00000005129	Prpf8	100	99.214	ENSMLUG00000002666	PRPF8	74	99.214	Myotis_lucifugus
ENSCGRG00000005129	Prpf8	100	99.533	ENSNGAG00000005305	Prpf8	73	99.533	Nannospalax_galili
ENSCGRG00000005129	Prpf8	100	99.213	ENSNBRG00000013127	prpf8	73	99.213	Neolamprologus_brichardi
ENSCGRG00000005129	Prpf8	96	99.409	ENSNLEG00000000897	PRPF8	71	99.409	Nomascus_leucogenys
ENSCGRG00000005129	Prpf8	100	99.409	ENSMEUG00000015999	PRPF8	75	99.409	Notamacropus_eugenii
ENSCGRG00000005129	Prpf8	100	99.533	ENSOPRG00000003102	PRPF8	74	99.533	Ochotona_princeps
ENSCGRG00000005129	Prpf8	100	99.409	ENSODEG00000008468	PRPF8	74	99.409	Octodon_degus
ENSCGRG00000005129	Prpf8	100	99.213	ENSONIG00000008153	prpf8	73	99.213	Oreochromis_niloticus
ENSCGRG00000005129	Prpf8	84	99.409	ENSOANG00000004250	PRPF8	72	99.409	Ornithorhynchus_anatinus
ENSCGRG00000005129	Prpf8	100	99.409	ENSOCUG00000000081	PRPF8	74	99.409	Oryctolagus_cuniculus
ENSCGRG00000005129	Prpf8	100	99.213	ENSORLG00000008036	prpf8	73	99.213	Oryzias_latipes
ENSCGRG00000005129	Prpf8	100	99.018	ENSORLG00020021070	prpf8	73	99.018	Oryzias_latipes_hni
ENSCGRG00000005129	Prpf8	100	99.213	ENSORLG00015002340	prpf8	73	99.213	Oryzias_latipes_hsok
ENSCGRG00000005129	Prpf8	100	99.213	ENSOMEG00000016866	prpf8	74	99.213	Oryzias_melastigma
ENSCGRG00000005129	Prpf8	100	99.409	ENSOARG00000013312	PRPF8	74	99.409	Ovis_aries
ENSCGRG00000005129	Prpf8	100	99.409	ENSPPAG00000042753	PRPF8	74	99.409	Pan_paniscus
ENSCGRG00000005129	Prpf8	100	99.409	ENSPPRG00000008746	PRPF8	74	99.409	Panthera_pardus
ENSCGRG00000005129	Prpf8	100	99.409	ENSPTIG00000019200	PRPF8	74	99.409	Panthera_tigris_altaica
ENSCGRG00000005129	Prpf8	100	99.409	ENSPTRG00000039576	PRPF8	74	99.409	Pan_troglodytes
ENSCGRG00000005129	Prpf8	100	99.409	ENSPANG00000024607	PRPF8	73	99.409	Papio_anubis
ENSCGRG00000005129	Prpf8	100	99.213	ENSPKIG00000011201	prpf8	73	99.213	Paramormyrops_kingsleyae
ENSCGRG00000005129	Prpf8	100	99.409	ENSPSIG00000013393	PRPF8	74	99.409	Pelodiscus_sinensis
ENSCGRG00000005129	Prpf8	100	99.533	ENSPEMG00000021699	Prpf8	74	99.533	Peromyscus_maniculatus_bairdii
ENSCGRG00000005129	Prpf8	100	96.457	ENSPMAG00000005438	prpf8	77	96.457	Petromyzon_marinus
ENSCGRG00000005129	Prpf8	100	99.409	ENSPCIG00000022603	PRPF8	77	99.409	Phascolarctos_cinereus
ENSCGRG00000005129	Prpf8	100	99.409	ENSPFOG00000007005	prpf8	73	99.409	Poecilia_formosa
ENSCGRG00000005129	Prpf8	100	99.409	ENSPLAG00000020777	prpf8	74	99.409	Poecilia_latipinna
ENSCGRG00000005129	Prpf8	100	99.409	ENSPMEG00000004051	prpf8	74	99.409	Poecilia_mexicana
ENSCGRG00000005129	Prpf8	100	99.409	ENSPREG00000021902	prpf8	74	99.409	Poecilia_reticulata
ENSCGRG00000005129	Prpf8	100	99.409	ENSPPYG00000007777	PRPF8	74	99.409	Pongo_abelii
ENSCGRG00000005129	Prpf8	90	99.287	ENSPCAG00000008938	PRPF8	66	99.287	Procavia_capensis
ENSCGRG00000005129	Prpf8	100	99.533	ENSPCOG00000015182	PRPF8	74	99.533	Propithecus_coquereli
ENSCGRG00000005129	Prpf8	90	98.031	ENSPVAG00000002134	PRPF8	66	98.031	Pteropus_vampyrus
ENSCGRG00000005129	Prpf8	100	99.213	ENSPNYG00000016356	prpf8	74	99.213	Pundamilia_nyererei
ENSCGRG00000005129	Prpf8	100	99.409	ENSPNAG00000009247	prpf8	73	99.409	Pygocentrus_nattereri
ENSCGRG00000005129	Prpf8	100	99.533	ENSRNOG00000003495	Prpf8	74	99.533	Rattus_norvegicus
ENSCGRG00000005129	Prpf8	100	99.409	ENSRBIG00000031219	PRPF8	77	99.065	Rhinopithecus_bieti
ENSCGRG00000005129	Prpf8	100	99.409	ENSRROG00000038014	PRPF8	77	99.065	Rhinopithecus_roxellana
ENSCGRG00000005129	Prpf8	100	62.863	YHR165C	PRP8	73	62.992	Saccharomyces_cerevisiae
ENSCGRG00000005129	Prpf8	100	99.409	ENSSBOG00000029717	PRPF8	74	99.409	Saimiri_boliviensis_boliviensis
ENSCGRG00000005129	Prpf8	100	99.409	ENSSHAG00000006167	PRPF8	74	99.409	Sarcophilus_harrisii
ENSCGRG00000005129	Prpf8	100	99.409	ENSSFOG00015013905	prpf8	73	99.409	Scleropages_formosus
ENSCGRG00000005129	Prpf8	100	99.409	ENSSMAG00000017736	prpf8	73	99.409	Scophthalmus_maximus
ENSCGRG00000005129	Prpf8	100	99.409	ENSSDUG00000003029	prpf8	73	99.409	Seriola_dumerili
ENSCGRG00000005129	Prpf8	73	99.409	ENSSLDG00000017096	prpf8	79	99.409	Seriola_lalandi_dorsalis
ENSCGRG00000005129	Prpf8	80	99.409	ENSSARG00000002892	PRPF8	59	99.409	Sorex_araneus
ENSCGRG00000005129	Prpf8	100	99.213	ENSSPUG00000007463	PRPF8	74	99.213	Sphenodon_punctatus
ENSCGRG00000005129	Prpf8	100	99.409	ENSSPAG00000015639	prpf8	73	99.409	Stegastes_partitus
ENSCGRG00000005129	Prpf8	100	99.409	ENSSSCG00000017817	PRPF8	74	99.409	Sus_scrofa
ENSCGRG00000005129	Prpf8	60	99.606	ENSTGUG00000015597	-	81	99.606	Taeniopygia_guttata
ENSCGRG00000005129	Prpf8	100	99.409	ENSTGUG00000005648	-	74	99.409	Taeniopygia_guttata
ENSCGRG00000005129	Prpf8	100	99.213	ENSTRUG00000015906	prpf8	73	99.213	Takifugu_rubripes
ENSCGRG00000005129	Prpf8	92	99.213	ENSTNIG00000003460	prpf8	71	99.213	Tetraodon_nigroviridis
ENSCGRG00000005129	Prpf8	95	99.802	ENSTBEG00000006431	PRPF8	70	99.802	Tupaia_belangeri
ENSCGRG00000005129	Prpf8	100	99.065	ENSTTRG00000006869	PRPF8	74	99.065	Tursiops_truncatus
ENSCGRG00000005129	Prpf8	58	98.679	ENSUAMG00000015644	-	75	98.679	Ursus_americanus
ENSCGRG00000005129	Prpf8	100	99.409	ENSUMAG00000009385	PRPF8	74	99.409	Ursus_maritimus
ENSCGRG00000005129	Prpf8	74	99.310	ENSVPAG00000006063	-	54	99.310	Vicugna_pacos
ENSCGRG00000005129	Prpf8	100	99.409	ENSVVUG00000021695	PRPF8	73	99.409	Vulpes_vulpes
ENSCGRG00000005129	Prpf8	100	99.018	ENSXETG00000022259	prpf8	74	99.018	Xenopus_tropicalis
ENSCGRG00000005129	Prpf8	100	99.409	ENSXCOG00000012775	prpf8	73	99.409	Xiphophorus_couchianus
ENSCGRG00000005129	Prpf8	100	99.409	ENSXMAG00000008505	prpf8	73	99.409	Xiphophorus_maculatus