EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000005387 (Gene tree)
Gene ID: -
Gene Symbol: Ssb
Alias: La protein|SS-B|autoantigen La
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 10996 bases
Position: chrJH000027.1:1048162-1059157
Accession: 100689103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000007408	RRM_1	PF00076.22	1.5e-13	1	1
ENSCGRP00000007408	RRM_3	PF08777.11	1.4e-28	1	1
ENSCGRP00000007408	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000007527	-	1407	XM_007645424	ENSCGRP00000007408	407 (aa)	XP_007643614	G3GU92

Gene Model

Click here to download ENSCGRG00000005387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000005387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000005387	Ssb	100	80.145	ENSG00000138385	SSB	100	92.391	Homo_sapiens
ENSCGRG00000005387	Ssb	98	52.109	ENSAPOG00000003448	ssb	100	51.716	Acanthochromis_polyacanthus
ENSCGRG00000005387	Ssb	100	78.095	ENSAMEG00000010507	SSB	100	76.190	Ailuropoda_melanoleuca
ENSCGRG00000005387	Ssb	92	54.111	ENSACIG00000001738	ssb	95	53.908	Amphilophus_citrinellus
ENSCGRG00000005387	Ssb	98	52.605	ENSAOCG00000020398	ssb	100	52.206	Amphiprion_ocellaris
ENSCGRG00000005387	Ssb	98	52.854	ENSAPEG00000020395	ssb	100	52.451	Amphiprion_percula
ENSCGRG00000005387	Ssb	99	53.563	ENSATEG00000016884	ssb	100	53.071	Anabas_testudineus
ENSCGRG00000005387	Ssb	100	65.412	ENSAPLG00000006109	SSB	100	63.357	Anas_platyrhynchos
ENSCGRG00000005387	Ssb	100	59.952	ENSACAG00000017008	SSB	99	59.952	Anolis_carolinensis
ENSCGRG00000005387	Ssb	100	70.488	ENSANAG00000027195	-	100	71.707	Aotus_nancymaae
ENSCGRG00000005387	Ssb	99	51.351	ENSACLG00000010798	ssb	100	51.351	Astatotilapia_calliptera
ENSCGRG00000005387	Ssb	98	50.122	ENSAMXG00000012606	ssb	100	48.832	Astyanax_mexicanus
ENSCGRG00000005387	Ssb	100	79.268	ENSBTAG00000008716	SSB	100	78.049	Bos_taurus
ENSCGRG00000005387	Ssb	73	33.444	WBGene00016653	C44E4.4	76	33.775	Caenorhabditis_elegans
ENSCGRG00000005387	Ssb	100	80.488	ENSCJAG00000045073	SSB	100	79.268	Callithrix_jacchus
ENSCGRG00000005387	Ssb	100	80.535	ENSCAFG00000012418	SSB	100	79.319	Canis_familiaris
ENSCGRG00000005387	Ssb	100	80.535	ENSCAFG00020002900	SSB	100	79.319	Canis_lupus_dingo
ENSCGRG00000005387	Ssb	100	79.512	ENSCHIG00000022624	-	100	78.293	Capra_hircus
ENSCGRG00000005387	Ssb	100	75.245	ENSCHIG00000022196	-	100	73.775	Capra_hircus
ENSCGRG00000005387	Ssb	100	80.488	ENSTSYG00000000097	SSB	100	79.268	Carlito_syrichta
ENSCGRG00000005387	Ssb	100	81.327	ENSCPOG00000003338	SSB	100	79.607	Cavia_porcellus
ENSCGRG00000005387	Ssb	100	81.220	ENSCCAG00000035147	SSB	86	94.783	Cebus_capucinus
ENSCGRG00000005387	Ssb	100	59.902	ENSCATG00000042909	-	100	58.680	Cercocebus_atys
ENSCGRG00000005387	Ssb	100	60.000	ENSCATG00000036701	SSB	100	58.537	Cercocebus_atys
ENSCGRG00000005387	Ssb	100	79.756	ENSCLAG00000015617	-	100	78.537	Chinchilla_lanigera
ENSCGRG00000005387	Ssb	100	80.244	ENSCSAG00000015200	SSB	89	79.024	Chlorocebus_sabaeus
ENSCGRG00000005387	Ssb	98	74.314	ENSCSAG00000018390	-	100	73.317	Chlorocebus_sabaeus
ENSCGRG00000005387	Ssb	100	80.976	ENSCHOG00000007763	SSB	100	79.756	Choloepus_hoffmanni
ENSCGRG00000005387	Ssb	100	69.807	ENSCPBG00000006519	SSB	100	68.841	Chrysemys_picta_bellii
ENSCGRG00000005387	Ssb	95	63.753	ENSCANG00000028838	-	92	62.725	Colobus_angolensis_palliatus
ENSCGRG00000005387	Ssb	100	68.949	ENSCANG00000033240	-	100	67.726	Colobus_angolensis_palliatus
ENSCGRG00000005387	Ssb	100	80.488	ENSCANG00000027695	SSB	100	79.268	Colobus_angolensis_palliatus
ENSCGRG00000005387	Ssb	100	100.000	ENSCGRG00001024831	Ssb	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000005387	Ssb	98	53.367	ENSCSEG00000011599	ssb	99	52.868	Cynoglossus_semilaevis
ENSCGRG00000005387	Ssb	99	53.317	ENSCVAG00000021558	ssb	100	52.580	Cyprinodon_variegatus
ENSCGRG00000005387	Ssb	98	50.000	ENSDARG00000029252	ssb	99	48.687	Danio_rerio
ENSCGRG00000005387	Ssb	100	80.488	ENSDNOG00000013450	SSB	100	79.268	Dasypus_novemcinctus
ENSCGRG00000005387	Ssb	100	79.902	ENSDORG00000005543	Ssb	100	77.941	Dipodomys_ordii
ENSCGRG00000005387	Ssb	85	32.203	FBgn0011638	La	67	35.294	Drosophila_melanogaster
ENSCGRG00000005387	Ssb	96	44.643	ENSEBUG00000001237	ssb	91	45.682	Eptatretus_burgeri
ENSCGRG00000005387	Ssb	99	81.572	ENSEASG00005022835	SSB	99	80.344	Equus_asinus_asinus
ENSCGRG00000005387	Ssb	100	81.220	ENSECAG00000018495	SSB	100	80.000	Equus_caballus
ENSCGRG00000005387	Ssb	75	70.820	ENSEEUG00000008077	SSB	78	70.820	Erinaceus_europaeus
ENSCGRG00000005387	Ssb	98	53.333	ENSELUG00000020929	ssb	91	55.405	Esox_lucius
ENSCGRG00000005387	Ssb	100	80.535	ENSFCAG00000011601	SSB	100	79.319	Felis_catus
ENSCGRG00000005387	Ssb	99	65.931	ENSFALG00000000930	SSB	99	66.912	Ficedula_albicollis
ENSCGRG00000005387	Ssb	100	79.756	ENSFDAG00000000598	SSB	100	78.537	Fukomys_damarensis
ENSCGRG00000005387	Ssb	73	47.297	ENSFHEG00000003268	ssb	92	50.831	Fundulus_heteroclitus
ENSCGRG00000005387	Ssb	97	51.478	ENSGMOG00000002664	ssb	99	51.613	Gadus_morhua
ENSCGRG00000005387	Ssb	99	66.748	ENSGALG00000009677	SSB	99	64.792	Gallus_gallus
ENSCGRG00000005387	Ssb	99	50.856	ENSGAFG00000002749	ssb	100	50.856	Gambusia_affinis
ENSCGRG00000005387	Ssb	99	50.976	ENSGACG00000005107	ssb	100	50.000	Gasterosteus_aculeatus
ENSCGRG00000005387	Ssb	100	69.565	ENSGAGG00000007807	SSB	100	68.599	Gopherus_agassizii
ENSCGRG00000005387	Ssb	63	78.788	ENSGGOG00000023471	-	100	78.788	Gorilla_gorilla
ENSCGRG00000005387	Ssb	100	67.317	ENSGGOG00000024891	-	99	66.504	Gorilla_gorilla
ENSCGRG00000005387	Ssb	99	50.860	ENSHBUG00000006584	ssb	100	50.860	Haplochromis_burtoni
ENSCGRG00000005387	Ssb	100	79.612	ENSHGLG00000017580	-	100	78.641	Heterocephalus_glaber_female
ENSCGRG00000005387	Ssb	100	72.549	ENSHGLG00000005832	-	100	71.324	Heterocephalus_glaber_female
ENSCGRG00000005387	Ssb	100	71.602	ENSHGLG00000004478	-	100	70.388	Heterocephalus_glaber_female
ENSCGRG00000005387	Ssb	100	68.293	ENSHGLG00100008767	-	100	67.073	Heterocephalus_glaber_male
ENSCGRG00000005387	Ssb	100	79.612	ENSHGLG00100003084	-	100	78.641	Heterocephalus_glaber_male
ENSCGRG00000005387	Ssb	98	50.750	ENSHCOG00000019011	ssb	99	50.750	Hippocampus_comes
ENSCGRG00000005387	Ssb	98	50.728	ENSIPUG00000003681	SSB	100	50.351	Ictalurus_punctatus
ENSCGRG00000005387	Ssb	100	80.976	ENSSTOG00000008416	SSB	100	79.756	Ictidomys_tridecemlineatus
ENSCGRG00000005387	Ssb	100	67.076	ENSJJAG00000016250	-	100	66.093	Jaculus_jaculus
ENSCGRG00000005387	Ssb	100	81.429	ENSJJAG00000023158	-	100	79.762	Jaculus_jaculus
ENSCGRG00000005387	Ssb	99	53.545	ENSKMAG00000017317	ssb	100	53.301	Kryptolebias_marmoratus
ENSCGRG00000005387	Ssb	98	50.372	ENSLBEG00000017345	ssb	100	50.369	Labrus_bergylta
ENSCGRG00000005387	Ssb	99	62.379	ENSLACG00000014056	SSB	99	60.680	Latimeria_chalumnae
ENSCGRG00000005387	Ssb	98	59.506	ENSLOCG00000007933	ssb	99	59.506	Lepisosteus_oculatus
ENSCGRG00000005387	Ssb	74	64.356	ENSLAFG00000026721	-	99	64.356	Loxodonta_africana
ENSCGRG00000005387	Ssb	100	75.592	ENSLAFG00000000867	-	100	75.355	Loxodonta_africana
ENSCGRG00000005387	Ssb	100	67.073	ENSLAFG00000028909	-	100	66.098	Loxodonta_africana
ENSCGRG00000005387	Ssb	89	72.576	ENSMFAG00000041478	-	91	74.540	Macaca_fascicularis
ENSCGRG00000005387	Ssb	100	80.488	ENSMFAG00000039066	SSB	85	94.783	Macaca_fascicularis
ENSCGRG00000005387	Ssb	100	80.488	ENSMMUG00000023051	SSB	85	94.783	Macaca_mulatta
ENSCGRG00000005387	Ssb	99	56.511	ENSMMUG00000039889	-	100	55.528	Macaca_mulatta
ENSCGRG00000005387	Ssb	100	69.118	ENSMMUG00000011724	-	97	68.137	Macaca_mulatta
ENSCGRG00000005387	Ssb	89	72.576	ENSMNEG00000034698	-	91	74.540	Macaca_nemestrina
ENSCGRG00000005387	Ssb	100	69.807	ENSMNEG00000028321	SSB	85	94.783	Macaca_nemestrina
ENSCGRG00000005387	Ssb	100	58.088	ENSMLEG00000042644	-	100	57.108	Mandrillus_leucophaeus
ENSCGRG00000005387	Ssb	100	80.488	ENSMLEG00000035717	SSB	88	94.783	Mandrillus_leucophaeus
ENSCGRG00000005387	Ssb	99	53.563	ENSMAMG00000004800	ssb	100	53.071	Mastacembelus_armatus
ENSCGRG00000005387	Ssb	99	51.351	ENSMZEG00005005749	ssb	100	51.351	Maylandia_zebra
ENSCGRG00000005387	Ssb	99	66.504	ENSMGAG00000010328	SSB	99	73.659	Meleagris_gallopavo
ENSCGRG00000005387	Ssb	99	80.835	ENSMICG00000028252	-	99	79.607	Microcebus_murinus
ENSCGRG00000005387	Ssb	98	74.564	ENSMICG00000033304	-	93	77.778	Microcebus_murinus
ENSCGRG00000005387	Ssb	100	69.903	ENSMODG00000008227	-	100	70.460	Monodelphis_domestica
ENSCGRG00000005387	Ssb	100	60.147	ENSMODG00000019271	-	100	59.413	Monodelphis_domestica
ENSCGRG00000005387	Ssb	100	57.702	ENSMODG00000007027	-	100	57.702	Monodelphis_domestica
ENSCGRG00000005387	Ssb	90	54.472	ENSMALG00000008045	ssb	88	54.717	Monopterus_albus
ENSCGRG00000005387	Ssb	100	89.474	MGP_CAROLIEiJ_G0023629	-	100	96.196	Mus_caroli
ENSCGRG00000005387	Ssb	100	89.952	ENSMUSG00000068882	Ssb	100	96.739	Mus_musculus
ENSCGRG00000005387	Ssb	100	89.713	MGP_PahariEiJ_G0025081	-	100	96.739	Mus_pahari
ENSCGRG00000005387	Ssb	100	89.952	MGP_SPRETEiJ_G0024551	Ssb	100	96.739	Mus_spretus
ENSCGRG00000005387	Ssb	100	80.976	ENSMPUG00000000785	SSB	100	79.756	Mustela_putorius_furo
ENSCGRG00000005387	Ssb	100	78.469	ENSMLUG00000016316	SSB	100	78.469	Myotis_lucifugus
ENSCGRG00000005387	Ssb	99	51.106	ENSNBRG00000012661	ssb	100	51.106	Neolamprologus_brichardi
ENSCGRG00000005387	Ssb	100	80.732	ENSNLEG00000004958	SSB	86	94.783	Nomascus_leucogenys
ENSCGRG00000005387	Ssb	100	61.463	ENSNLEG00000028754	-	100	61.463	Nomascus_leucogenys
ENSCGRG00000005387	Ssb	61	81.048	ENSMEUG00000001650	-	100	81.048	Notamacropus_eugenii
ENSCGRG00000005387	Ssb	52	83.871	ENSOPRG00000008475	-	75	83.871	Ochotona_princeps
ENSCGRG00000005387	Ssb	93	77.165	ENSODEG00000004202	-	100	75.591	Octodon_degus
ENSCGRG00000005387	Ssb	99	50.614	ENSONIG00000008776	ssb	100	50.614	Oreochromis_niloticus
ENSCGRG00000005387	Ssb	100	72.195	ENSOANG00000008543	SSB	100	72.439	Ornithorhynchus_anatinus
ENSCGRG00000005387	Ssb	100	80.000	ENSOCUG00000010396	SSB	100	79.075	Oryctolagus_cuniculus
ENSCGRG00000005387	Ssb	99	53.317	ENSORLG00000017208	ssb	100	53.071	Oryzias_latipes
ENSCGRG00000005387	Ssb	99	53.563	ENSORLG00020022574	ssb	100	53.563	Oryzias_latipes_hni
ENSCGRG00000005387	Ssb	99	53.317	ENSORLG00015016592	ssb	100	53.071	Oryzias_latipes_hsok
ENSCGRG00000005387	Ssb	98	52.854	ENSOMEG00000003193	ssb	100	53.071	Oryzias_melastigma
ENSCGRG00000005387	Ssb	100	76.540	ENSOGAG00000029768	SSB	100	75.592	Otolemur_garnettii
ENSCGRG00000005387	Ssb	100	78.293	ENSOARG00000002906	SSB	100	78.293	Ovis_aries
ENSCGRG00000005387	Ssb	97	61.307	ENSPPAG00000006189	-	93	65.934	Pan_paniscus
ENSCGRG00000005387	Ssb	99	66.015	ENSPPAG00000032427	-	100	82.946	Pan_paniscus
ENSCGRG00000005387	Ssb	100	80.145	ENSPPAG00000042673	SSB	86	94.783	Pan_paniscus
ENSCGRG00000005387	Ssb	100	80.535	ENSPPRG00000006599	SSB	100	79.319	Panthera_pardus
ENSCGRG00000005387	Ssb	100	80.292	ENSPTIG00000011021	SSB	97	79.075	Panthera_tigris_altaica
ENSCGRG00000005387	Ssb	100	80.145	ENSPTRG00000012620	SSB	86	94.783	Pan_troglodytes
ENSCGRG00000005387	Ssb	99	63.971	ENSPTRG00000042880	-	99	62.990	Pan_troglodytes
ENSCGRG00000005387	Ssb	95	57.623	ENSPANG00000031877	-	91	57.623	Papio_anubis
ENSCGRG00000005387	Ssb	100	59.902	ENSPANG00000034126	-	100	57.279	Papio_anubis
ENSCGRG00000005387	Ssb	100	80.488	ENSPANG00000007440	SSB	85	94.783	Papio_anubis
ENSCGRG00000005387	Ssb	99	56.790	ENSPKIG00000019325	ssb	100	57.702	Paramormyrops_kingsleyae
ENSCGRG00000005387	Ssb	100	67.391	ENSPSIG00000002265	SSB	93	66.425	Pelodiscus_sinensis
ENSCGRG00000005387	Ssb	85	49.573	ENSPMGG00000020075	ssb	89	49.288	Periophthalmus_magnuspinnatus
ENSCGRG00000005387	Ssb	90	45.676	ENSPMAG00000002982	ssb	86	45.745	Petromyzon_marinus
ENSCGRG00000005387	Ssb	100	73.479	ENSPCIG00000028591	-	100	71.220	Phascolarctos_cinereus
ENSCGRG00000005387	Ssb	99	52.088	ENSPFOG00000009650	ssb	100	52.088	Poecilia_formosa
ENSCGRG00000005387	Ssb	99	51.843	ENSPLAG00000020498	ssb	100	52.088	Poecilia_latipinna
ENSCGRG00000005387	Ssb	99	51.843	ENSPMEG00000001051	ssb	100	51.843	Poecilia_mexicana
ENSCGRG00000005387	Ssb	91	53.867	ENSPREG00000003708	ssb	96	53.639	Poecilia_reticulata
ENSCGRG00000005387	Ssb	100	80.732	ENSPPYG00000012919	SSB	100	79.512	Pongo_abelii
ENSCGRG00000005387	Ssb	95	74.935	ENSPCAG00000010276	SSB	100	74.935	Procavia_capensis
ENSCGRG00000005387	Ssb	100	75.306	ENSPCOG00000015741	-	92	87.931	Propithecus_coquereli
ENSCGRG00000005387	Ssb	100	69.024	ENSPCOG00000023189	-	100	67.805	Propithecus_coquereli
ENSCGRG00000005387	Ssb	86	82.670	ENSPVAG00000006615	SSB	87	86.557	Pteropus_vampyrus
ENSCGRG00000005387	Ssb	99	51.351	ENSPNYG00000006444	ssb	100	51.351	Pundamilia_nyererei
ENSCGRG00000005387	Ssb	98	51.582	ENSPNAG00000011708	ssb	100	50.704	Pygocentrus_nattereri
ENSCGRG00000005387	Ssb	100	93.120	ENSRNOG00000011606	AABR07061825.1	100	91.646	Rattus_norvegicus
ENSCGRG00000005387	Ssb	100	91.866	ENSRNOG00000007998	Ssb	100	90.431	Rattus_norvegicus
ENSCGRG00000005387	Ssb	94	66.841	ENSRBIG00000041232	-	88	77.698	Rhinopithecus_bieti
ENSCGRG00000005387	Ssb	100	68.599	ENSRBIG00000041972	SSB	88	94.783	Rhinopithecus_bieti
ENSCGRG00000005387	Ssb	89	71.781	ENSRBIG00000041608	-	98	68.665	Rhinopithecus_bieti
ENSCGRG00000005387	Ssb	100	56.585	ENSRBIG00000029918	-	100	55.610	Rhinopithecus_bieti
ENSCGRG00000005387	Ssb	100	80.488	ENSRROG00000040346	SSB	85	94.783	Rhinopithecus_roxellana
ENSCGRG00000005387	Ssb	100	65.610	ENSRROG00000007149	-	100	64.390	Rhinopithecus_roxellana
ENSCGRG00000005387	Ssb	98	71.358	ENSRROG00000034102	-	98	69.975	Rhinopithecus_roxellana
ENSCGRG00000005387	Ssb	98	68.250	ENSRROG00000031684	-	86	81.507	Rhinopithecus_roxellana
ENSCGRG00000005387	Ssb	100	81.220	ENSSBOG00000027204	SSB	86	94.783	Saimiri_boliviensis_boliviensis
ENSCGRG00000005387	Ssb	100	73.236	ENSSHAG00000018062	SSB	100	70.976	Sarcophilus_harrisii
ENSCGRG00000005387	Ssb	99	58.680	ENSSFOG00015000550	ssb	100	58.596	Scleropages_formosus
ENSCGRG00000005387	Ssb	98	49.626	ENSSMAG00000013885	ssb	98	53.639	Scophthalmus_maximus
ENSCGRG00000005387	Ssb	99	53.317	ENSSDUG00000020117	ssb	100	52.580	Seriola_dumerili
ENSCGRG00000005387	Ssb	99	50.864	ENSSLDG00000002525	ssb	100	51.852	Seriola_lalandi_dorsalis
ENSCGRG00000005387	Ssb	95	70.876	ENSSARG00000007747	SSB	100	66.753	Sorex_araneus
ENSCGRG00000005387	Ssb	100	68.204	ENSSPUG00000012112	SSB	100	68.689	Sphenodon_punctatus
ENSCGRG00000005387	Ssb	98	52.109	ENSSPAG00000005696	ssb	100	51.843	Stegastes_partitus
ENSCGRG00000005387	Ssb	99	73.529	ENSSSCG00000015938	SSB	99	73.333	Sus_scrofa
ENSCGRG00000005387	Ssb	92	67.647	ENSTGUG00000007942	SSB	99	64.390	Taeniopygia_guttata
ENSCGRG00000005387	Ssb	99	52.812	ENSTRUG00000017839	ssb	100	52.812	Takifugu_rubripes
ENSCGRG00000005387	Ssb	91	54.813	ENSTNIG00000000915	ssb	91	58.663	Tetraodon_nigroviridis
ENSCGRG00000005387	Ssb	82	94.783	ENSTBEG00000009056	SSB	81	94.783	Tupaia_belangeri
ENSCGRG00000005387	Ssb	100	79.268	ENSTTRG00000002152	SSB	100	78.049	Tursiops_truncatus
ENSCGRG00000005387	Ssb	92	84.000	ENSUAMG00000027833	SSB	96	83.198	Ursus_americanus
ENSCGRG00000005387	Ssb	100	80.292	ENSUMAG00000013907	SSB	100	79.075	Ursus_maritimus
ENSCGRG00000005387	Ssb	100	80.244	ENSVPAG00000007183	SSB	100	79.024	Vicugna_pacos
ENSCGRG00000005387	Ssb	100	80.535	ENSVVUG00000016573	SSB	78	79.319	Vulpes_vulpes
ENSCGRG00000005387	Ssb	94	57.403	ENSXETG00000025402	ssb	77	62.997	Xenopus_tropicalis
ENSCGRG00000005387	Ssb	91	52.815	ENSXCOG00000019109	ssb	93	58.594	Xiphophorus_couchianus
ENSCGRG00000005387	Ssb	99	51.345	ENSXMAG00000004888	ssb	100	50.611	Xiphophorus_maculatus