EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000005443 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 78103 bases
Position: chrJH002214.1:72388-150490
Accession: 100750526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000007478	Lactamase_B	PF00753.27	3.6e-10	1	1
ENSCGRP00000007477	Lactamase_B	PF00753.27	4.9e-10	1	1
ENSCGRP00000007476	Lactamase_B	PF00753.27	6.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000007597	-	1158	-	ENSCGRP00000007477	385 (aa)	-	-
ENSCGRT00000007596	-	1266	-	ENSCGRP00000007476	421 (aa)	-	-
ENSCGRT00000007598	-	3623	XM_003513223	ENSCGRP00000007478	360 (aa)	XP_003513271	G3IEK8

Gene Model

Click here to download ENSCGRG00000005443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000005443's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000005443	Pnkd	64	42.083	ENSCGRG00000018412	Haghl	100	42.083
ENSCGRG00000005443	Pnkd	74	40.602	ENSCGRG00000012412	Hagh	98	40.602

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000005443	Pnkd	97	96.000	ENSG00000127838	PNKD	100	91.967	Homo_sapiens
ENSCGRG00000005443	Pnkd	98	57.627	ENSAPOG00000019072	pnkd	97	57.143	Acanthochromis_polyacanthus
ENSCGRG00000005443	Pnkd	97	95.467	ENSAMEG00000003089	PNKD	96	95.393	Ailuropoda_melanoleuca
ENSCGRG00000005443	Pnkd	96	54.324	ENSACIG00000015359	pnkd	84	61.765	Amphilophus_citrinellus
ENSCGRG00000005443	Pnkd	81	58.863	ENSAOCG00000024159	pnkd	98	53.709	Amphiprion_ocellaris
ENSCGRG00000005443	Pnkd	89	61.442	ENSAOCG00000011458	-	99	56.303	Amphiprion_ocellaris
ENSCGRG00000005443	Pnkd	89	61.442	ENSAPEG00000011710	pnkd	89	61.442	Amphiprion_percula
ENSCGRG00000005443	Pnkd	89	61.129	ENSATEG00000002727	pnkd	97	56.977	Anabas_testudineus
ENSCGRG00000005443	Pnkd	89	62.813	ENSACAG00000001617	PNKD	99	55.978	Anolis_carolinensis
ENSCGRG00000005443	Pnkd	97	95.467	ENSANAG00000019661	PNKD	100	95.283	Aotus_nancymaae
ENSCGRG00000005443	Pnkd	95	59.767	ENSACLG00000021665	pnkd	89	62.069	Astatotilapia_calliptera
ENSCGRG00000005443	Pnkd	100	58.172	ENSAMXG00000043305	pnkd	90	61.963	Astyanax_mexicanus
ENSCGRG00000005443	Pnkd	100	90.556	ENSBTAG00000003936	PNKD	100	90.556	Bos_taurus
ENSCGRG00000005443	Pnkd	97	95.467	ENSCJAG00000010820	PNKD	100	91.690	Callithrix_jacchus
ENSCGRG00000005443	Pnkd	97	93.333	ENSCAFG00000014632	PNKD	96	93.225	Canis_familiaris
ENSCGRG00000005443	Pnkd	100	90.833	ENSCAFG00020027093	PNKD	100	90.833	Canis_lupus_dingo
ENSCGRG00000005443	Pnkd	97	94.400	ENSCHIG00000002862	PNKD	96	94.309	Capra_hircus
ENSCGRG00000005443	Pnkd	97	95.200	ENSTSYG00000034863	PNKD	96	95.122	Carlito_syrichta
ENSCGRG00000005443	Pnkd	100	93.349	ENSCPOG00000020589	PNKD	100	93.056	Cavia_porcellus
ENSCGRG00000005443	Pnkd	97	95.733	ENSCCAG00000036713	PNKD	98	93.691	Cebus_capucinus
ENSCGRG00000005443	Pnkd	97	95.733	ENSCATG00000041188	PNKD	100	92.244	Cercocebus_atys
ENSCGRG00000005443	Pnkd	100	94.299	ENSCLAG00000012048	PNKD	100	94.167	Chinchilla_lanigera
ENSCGRG00000005443	Pnkd	97	95.733	ENSCSAG00000008892	PNKD	96	95.664	Chlorocebus_sabaeus
ENSCGRG00000005443	Pnkd	97	95.733	ENSCANG00000032283	PNKD	100	91.854	Colobus_angolensis_palliatus
ENSCGRG00000005443	Pnkd	100	100.000	ENSCGRG00001024071	Pnkd	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000005443	Pnkd	98	55.899	ENSCSEG00000013958	pnkd	99	53.933	Cynoglossus_semilaevis
ENSCGRG00000005443	Pnkd	89	61.442	ENSCVAG00000005723	pnkd	89	61.442	Cyprinodon_variegatus
ENSCGRG00000005443	Pnkd	100	55.956	ENSDARG00000071032	pnkd	89	61.250	Danio_rerio
ENSCGRG00000005443	Pnkd	99	91.086	ENSDNOG00000046154	PNKD	89	90.251	Dasypus_novemcinctus
ENSCGRG00000005443	Pnkd	100	93.617	ENSDORG00000016109	Pnkd	99	94.090	Dipodomys_ordii
ENSCGRG00000005443	Pnkd	97	64.116	ENSETEG00000014587	PNKD	80	74.516	Echinops_telfairi
ENSCGRG00000005443	Pnkd	85	54.248	ENSEBUG00000013857	pnkd	98	53.668	Eptatretus_burgeri
ENSCGRG00000005443	Pnkd	100	91.111	ENSEASG00005012391	PNKD	100	91.111	Equus_asinus_asinus
ENSCGRG00000005443	Pnkd	97	94.400	ENSECAG00000013322	PNKD	96	94.309	Equus_caballus
ENSCGRG00000005443	Pnkd	89	59.561	ENSELUG00000015007	pnkd	91	55.714	Esox_lucius
ENSCGRG00000005443	Pnkd	100	91.111	ENSFCAG00000002373	PNKD	100	91.111	Felis_catus
ENSCGRG00000005443	Pnkd	86	63.107	ENSFALG00000004028	PNKD	97	61.774	Ficedula_albicollis
ENSCGRG00000005443	Pnkd	100	94.062	ENSFDAG00000012326	PNKD	100	95.283	Fukomys_damarensis
ENSCGRG00000005443	Pnkd	89	61.755	ENSFHEG00000010999	pnkd	86	61.755	Fundulus_heteroclitus
ENSCGRG00000005443	Pnkd	100	56.233	ENSGMOG00000009565	pnkd	96	56.686	Gadus_morhua
ENSCGRG00000005443	Pnkd	85	63.072	ENSGALG00000022166	PNKD	98	63.072	Gallus_gallus
ENSCGRG00000005443	Pnkd	89	62.069	ENSGAFG00000013942	pnkd	80	62.069	Gambusia_affinis
ENSCGRG00000005443	Pnkd	96	59.420	ENSGACG00000007119	pnkd	91	61.162	Gasterosteus_aculeatus
ENSCGRG00000005443	Pnkd	88	61.950	ENSGAGG00000017234	PNKD	100	61.950	Gopherus_agassizii
ENSCGRG00000005443	Pnkd	97	96.000	ENSGGOG00000006892	PNKD	96	95.935	Gorilla_gorilla
ENSCGRG00000005443	Pnkd	95	59.767	ENSHBUG00000001234	pnkd	89	62.069	Haplochromis_burtoni
ENSCGRG00000005443	Pnkd	100	93.112	ENSHGLG00000013971	PNKD	100	93.056	Heterocephalus_glaber_female
ENSCGRG00000005443	Pnkd	100	93.112	ENSHGLG00100005225	PNKD	99	93.112	Heterocephalus_glaber_male
ENSCGRG00000005443	Pnkd	99	57.703	ENSHCOG00000018894	pnkd	88	62.420	Hippocampus_comes
ENSCGRG00000005443	Pnkd	100	59.504	ENSIPUG00000013907	pnkd	99	63.844	Ictalurus_punctatus
ENSCGRG00000005443	Pnkd	100	95.487	ENSSTOG00000024593	PNKD	99	95.487	Ictidomys_tridecemlineatus
ENSCGRG00000005443	Pnkd	100	92.637	ENSJJAG00000023559	Pnkd	99	93.587	Jaculus_jaculus
ENSCGRG00000005443	Pnkd	89	61.129	ENSKMAG00000014879	pnkd	89	61.129	Kryptolebias_marmoratus
ENSCGRG00000005443	Pnkd	89	61.442	ENSLBEG00000000985	pnkd	89	61.442	Labrus_bergylta
ENSCGRG00000005443	Pnkd	100	57.377	ENSLOCG00000000821	pnkd	89	61.129	Lepisosteus_oculatus
ENSCGRG00000005443	Pnkd	100	90.974	ENSLAFG00000007427	PNKD	99	90.974	Loxodonta_africana
ENSCGRG00000005443	Pnkd	97	95.733	ENSMFAG00000038281	PNKD	100	91.690	Macaca_fascicularis
ENSCGRG00000005443	Pnkd	50	97.790	ENSMMUG00000022819	-	100	97.790	Macaca_mulatta
ENSCGRG00000005443	Pnkd	100	92.244	ENSMNEG00000041541	PNKD	100	95.860	Macaca_nemestrina
ENSCGRG00000005443	Pnkd	97	95.733	ENSMLEG00000042812	PNKD	96	95.664	Mandrillus_leucophaeus
ENSCGRG00000005443	Pnkd	100	56.749	ENSMAMG00000017212	pnkd	99	56.022	Mastacembelus_armatus
ENSCGRG00000005443	Pnkd	82	62.373	ENSMZEG00005012514	pnkd	100	62.373	Maylandia_zebra
ENSCGRG00000005443	Pnkd	51	51.364	ENSMGAG00000011524	PNKD	100	56.250	Meleagris_gallopavo
ENSCGRG00000005443	Pnkd	100	99.167	ENSMAUG00000013099	Pnkd	100	99.167	Mesocricetus_auratus
ENSCGRG00000005443	Pnkd	97	96.267	ENSMICG00000042547	PNKD	96	96.206	Microcebus_murinus
ENSCGRG00000005443	Pnkd	100	99.167	ENSMOCG00000007956	Pnkd	100	99.167	Microtus_ochrogaster
ENSCGRG00000005443	Pnkd	86	62.136	ENSMMOG00000005679	pnkd	99	58.213	Mola_mola
ENSCGRG00000005443	Pnkd	86	79.421	ENSMODG00000015497	PNKD	93	75.227	Monodelphis_domestica
ENSCGRG00000005443	Pnkd	95	60.290	ENSMALG00000005967	pnkd	78	63.578	Monopterus_albus
ENSCGRG00000005443	Pnkd	100	97.778	MGP_CAROLIEiJ_G0014258	Pnkd	100	97.778	Mus_caroli
ENSCGRG00000005443	Pnkd	100	97.387	ENSMUSG00000026179	Pnkd	100	96.944	Mus_musculus
ENSCGRG00000005443	Pnkd	100	97.778	MGP_PahariEiJ_G0027496	Pnkd	100	97.778	Mus_pahari
ENSCGRG00000005443	Pnkd	100	96.944	MGP_SPRETEiJ_G0015064	Pnkd	100	96.944	Mus_spretus
ENSCGRG00000005443	Pnkd	100	91.944	ENSMPUG00000016531	PNKD	100	91.944	Mustela_putorius_furo
ENSCGRG00000005443	Pnkd	85	93.791	ENSMLUG00000004125	PNKD	100	93.791	Myotis_lucifugus
ENSCGRG00000005443	Pnkd	100	95.962	ENSNGAG00000014980	Pnkd	100	95.278	Nannospalax_galili
ENSCGRG00000005443	Pnkd	86	62.338	ENSNBRG00000020031	pnkd	96	62.136	Neolamprologus_brichardi
ENSCGRG00000005443	Pnkd	97	73.190	ENSMEUG00000011266	PNKD	98	73.514	Notamacropus_eugenii
ENSCGRG00000005443	Pnkd	100	95.000	ENSODEG00000009734	PNKD	100	95.000	Octodon_degus
ENSCGRG00000005443	Pnkd	95	59.184	ENSONIG00000004389	pnkd	89	61.442	Oreochromis_niloticus
ENSCGRG00000005443	Pnkd	100	91.211	ENSOCUG00000023754	PNKD	99	91.211	Oryctolagus_cuniculus
ENSCGRG00000005443	Pnkd	89	59.574	ENSORLG00000026276	pnkd	97	55.587	Oryzias_latipes
ENSCGRG00000005443	Pnkd	89	59.574	ENSORLG00020008373	pnkd	97	61.589	Oryzias_latipes_hni
ENSCGRG00000005443	Pnkd	89	59.878	ENSORLG00015005276	pnkd	97	55.587	Oryzias_latipes_hsok
ENSCGRG00000005443	Pnkd	90	60.429	ENSOMEG00000016106	pnkd	97	55.874	Oryzias_melastigma
ENSCGRG00000005443	Pnkd	85	96.078	ENSOGAG00000001792	PNKD	100	96.078	Otolemur_garnettii
ENSCGRG00000005443	Pnkd	97	94.667	ENSOARG00000019505	PNKD	96	94.580	Ovis_aries
ENSCGRG00000005443	Pnkd	97	96.000	ENSPPAG00000034969	PNKD	100	91.967	Pan_paniscus
ENSCGRG00000005443	Pnkd	100	91.111	ENSPPRG00000023720	PNKD	100	91.111	Panthera_pardus
ENSCGRG00000005443	Pnkd	97	88.267	ENSPTIG00000021040	PNKD	96	88.076	Panthera_tigris_altaica
ENSCGRG00000005443	Pnkd	97	95.733	ENSPTRG00000012914	PNKD	100	91.690	Pan_troglodytes
ENSCGRG00000005443	Pnkd	97	95.733	ENSPANG00000005752	PNKD	100	91.690	Papio_anubis
ENSCGRG00000005443	Pnkd	97	57.759	ENSPKIG00000011208	pnkd	100	59.434	Paramormyrops_kingsleyae
ENSCGRG00000005443	Pnkd	85	59.804	ENSPMGG00000005169	pnkd	100	59.804	Periophthalmus_magnuspinnatus
ENSCGRG00000005443	Pnkd	100	98.889	ENSPEMG00000010689	Pnkd	100	98.889	Peromyscus_maniculatus_bairdii
ENSCGRG00000005443	Pnkd	85	53.922	ENSPMAG00000006947	pnkd	99	53.922	Petromyzon_marinus
ENSCGRG00000005443	Pnkd	91	79.141	ENSPCIG00000021457	PNKD	90	79.141	Phascolarctos_cinereus
ENSCGRG00000005443	Pnkd	88	62.540	ENSPFOG00000010628	pnkd	95	57.849	Poecilia_formosa
ENSCGRG00000005443	Pnkd	62	66.071	ENSPLAG00000020583	pnkd	95	59.289	Poecilia_latipinna
ENSCGRG00000005443	Pnkd	72	65.251	ENSPMEG00000006542	pnkd	73	59.722	Poecilia_mexicana
ENSCGRG00000005443	Pnkd	88	61.905	ENSPREG00000014434	pnkd	95	57.434	Poecilia_reticulata
ENSCGRG00000005443	Pnkd	97	95.467	ENSPPYG00000013167	PNKD	96	95.393	Pongo_abelii
ENSCGRG00000005443	Pnkd	97	75.733	ENSPCAG00000003946	PNKD	96	75.339	Procavia_capensis
ENSCGRG00000005443	Pnkd	97	96.533	ENSPCOG00000019839	PNKD	96	96.477	Propithecus_coquereli
ENSCGRG00000005443	Pnkd	88	62.264	ENSPNYG00000016327	pnkd	100	62.264	Pundamilia_nyererei
ENSCGRG00000005443	Pnkd	100	58.726	ENSPNAG00000008655	pnkd	100	58.726	Pygocentrus_nattereri
ENSCGRG00000005443	Pnkd	100	97.500	ENSRNOG00000014806	Pnkd	100	98.141	Rattus_norvegicus
ENSCGRG00000005443	Pnkd	97	95.733	ENSRBIG00000031614	PNKD	100	91.690	Rhinopithecus_bieti
ENSCGRG00000005443	Pnkd	97	95.733	ENSRROG00000045542	PNKD	100	91.690	Rhinopithecus_roxellana
ENSCGRG00000005443	Pnkd	100	93.112	ENSSBOG00000036000	PNKD	99	93.112	Saimiri_boliviensis_boliviensis
ENSCGRG00000005443	Pnkd	88	79.751	ENSSHAG00000016339	PNKD	100	79.751	Sarcophilus_harrisii
ENSCGRG00000005443	Pnkd	90	61.846	ENSSFOG00015013028	pnkd	87	61.846	Scleropages_formosus
ENSCGRG00000005443	Pnkd	97	58.120	ENSSMAG00000006812	pnkd	97	56.571	Scophthalmus_maximus
ENSCGRG00000005443	Pnkd	89	60.815	ENSSDUG00000012538	pnkd	99	55.742	Seriola_dumerili
ENSCGRG00000005443	Pnkd	89	60.815	ENSSLDG00000021431	pnkd	86	60.815	Seriola_lalandi_dorsalis
ENSCGRG00000005443	Pnkd	86	49.196	ENSSPUG00000018454	PNKD	98	52.131	Sphenodon_punctatus
ENSCGRG00000005443	Pnkd	89	61.442	ENSSPAG00000007083	pnkd	99	56.215	Stegastes_partitus
ENSCGRG00000005443	Pnkd	100	94.231	ENSSSCG00000029002	PNKD	100	94.904	Sus_scrofa
ENSCGRG00000005443	Pnkd	89	59.875	ENSTRUG00000009399	pnkd	99	54.108	Takifugu_rubripes
ENSCGRG00000005443	Pnkd	97	57.184	ENSTNIG00000010992	pnkd	92	59.819	Tetraodon_nigroviridis
ENSCGRG00000005443	Pnkd	97	93.333	ENSTTRG00000012895	PNKD	96	93.225	Tursiops_truncatus
ENSCGRG00000005443	Pnkd	100	90.833	ENSUAMG00000000289	PNKD	100	90.833	Ursus_americanus
ENSCGRG00000005443	Pnkd	97	78.933	ENSUMAG00000019639	PNKD	96	78.591	Ursus_maritimus
ENSCGRG00000005443	Pnkd	100	94.805	ENSVVUG00000007348	PNKD	96	95.393	Vulpes_vulpes
ENSCGRG00000005443	Pnkd	86	63.666	ENSXETG00000014931	pnkd	99	64.078	Xenopus_tropicalis
ENSCGRG00000005443	Pnkd	86	62.662	ENSXCOG00000014370	pnkd	95	62.662	Xiphophorus_couchianus