EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000005458 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 42043 bases
Position: chrJH000651.1:561088-603130
Accession: 100769876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000007497	MMR_HSR1	PF01926.23	8.5e-09	1	1
ENSCGRP00000007496	MMR_HSR1	PF01926.23	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000007616	-	2601	-	ENSCGRP00000007496	866 (aa)	-	-
ENSCGRT00000007617	-	1419	XM_016977519	ENSCGRP00000007497	472 (aa)	XP_016833008	-

Gene Model

Click here to download ENSCGRG00000005458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000005458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000005458	Srl	61	36.332	ENSCGRG00000007631	Ehd4	56	36.395
ENSCGRG00000005458	Srl	74	33.714	ENSCGRG00000013157	Ehd3	70	33.684
ENSCGRG00000005458	Srl	74	35.057	ENSCGRG00000000662	Ehd1	67	35.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000005458	Srl	100	95.983	ENSG00000185739	SRL	100	97.448	Homo_sapiens
ENSCGRG00000005458	Srl	100	81.144	ENSAPOG00000018093	srl	100	84.009	Acanthochromis_polyacanthus
ENSCGRG00000005458	Srl	94	76.923	ENSAPOG00000012432	SRL	98	75.964	Acanthochromis_polyacanthus
ENSCGRG00000005458	Srl	98	96.320	ENSAMEG00000010862	SRL	100	66.849	Ailuropoda_melanoleuca
ENSCGRG00000005458	Srl	96	83.186	ENSACIG00000015799	srl	100	83.223	Amphilophus_citrinellus
ENSCGRG00000005458	Srl	94	74.775	ENSACIG00000015419	SRL	99	74.775	Amphilophus_citrinellus
ENSCGRG00000005458	Srl	96	75.219	ENSAOCG00000017049	SRL	99	75.219	Amphiprion_ocellaris
ENSCGRG00000005458	Srl	92	84.793	ENSAOCG00000007574	srl	100	84.793	Amphiprion_ocellaris
ENSCGRG00000005458	Srl	96	71.209	ENSAPEG00000006533	SRL	99	71.209	Amphiprion_percula
ENSCGRG00000005458	Srl	100	81.356	ENSAPEG00000006911	srl	96	83.407	Amphiprion_percula
ENSCGRG00000005458	Srl	100	81.144	ENSATEG00000024315	srl	97	82.857	Anabas_testudineus
ENSCGRG00000005458	Srl	94	73.626	ENSATEG00000009643	SRL	52	72.967	Anabas_testudineus
ENSCGRG00000005458	Srl	100	86.475	ENSACAG00000016380	SRL	86	88.723	Anolis_carolinensis
ENSCGRG00000005458	Srl	98	82.151	ENSACLG00000027685	srl	98	83.333	Astatotilapia_calliptera
ENSCGRG00000005458	Srl	94	72.747	ENSACLG00000024674	SRL	68	64.919	Astatotilapia_calliptera
ENSCGRG00000005458	Srl	88	78.072	ENSAMXG00000038693	SRL	100	73.731	Astyanax_mexicanus
ENSCGRG00000005458	Srl	99	81.370	ENSAMXG00000018789	srl	87	83.559	Astyanax_mexicanus
ENSCGRG00000005458	Srl	96	95.806	ENSBTAG00000001078	SRL	98	68.728	Bos_taurus
ENSCGRG00000005458	Srl	94	97.291	ENSCJAG00000019750	SRL	96	96.689	Callithrix_jacchus
ENSCGRG00000005458	Srl	97	96.522	ENSCAFG00000019233	SRL	98	86.389	Canis_familiaris
ENSCGRG00000005458	Srl	96	96.923	ENSCAFG00020025024	SRL	98	74.087	Canis_lupus_dingo
ENSCGRG00000005458	Srl	99	94.624	ENSCHIG00000017927	SRL	98	70.141	Capra_hircus
ENSCGRG00000005458	Srl	100	97.252	ENSTSYG00000007919	SRL	100	98.376	Carlito_syrichta
ENSCGRG00000005458	Srl	100	97.669	ENSCPOG00000012643	SRL	100	97.669	Cavia_porcellus
ENSCGRG00000005458	Srl	100	89.006	ENSCCAG00000032646	SRL	100	97.625	Cebus_capucinus
ENSCGRG00000005458	Srl	100	96.195	ENSCATG00000032227	-	96	96.909	Cercocebus_atys
ENSCGRG00000005458	Srl	100	97.881	ENSCLAG00000016242	SRL	100	97.881	Chinchilla_lanigera
ENSCGRG00000005458	Srl	97	95.652	ENSCSAG00000009635	-	91	90.998	Chlorocebus_sabaeus
ENSCGRG00000005458	Srl	82	96.883	ENSCHOG00000001618	SRL	87	96.883	Choloepus_hoffmanni
ENSCGRG00000005458	Srl	96	93.005	ENSCPBG00000026371	SRL	97	88.060	Chrysemys_picta_bellii
ENSCGRG00000005458	Srl	94	57.494	ENSCING00000005231	-	91	60.591	Ciona_intestinalis
ENSCGRG00000005458	Srl	100	96.195	ENSCANG00000035872	SRL	100	97.448	Colobus_angolensis_palliatus
ENSCGRG00000005458	Srl	100	100.000	ENSCGRG00001016630	Srl	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000005458	Srl	99	70.362	ENSCSEG00000011866	SRL	92	71.930	Cynoglossus_semilaevis
ENSCGRG00000005458	Srl	100	81.356	ENSCSEG00000016151	srl	97	82.599	Cynoglossus_semilaevis
ENSCGRG00000005458	Srl	100	81.144	ENSCVAG00000003513	srl	96	84.163	Cyprinodon_variegatus
ENSCGRG00000005458	Srl	94	75.442	ENSCVAG00000022465	SRL	60	75.442	Cyprinodon_variegatus
ENSCGRG00000005458	Srl	99	82.090	ENSDARG00000104587	srl	98	82.789	Danio_rerio
ENSCGRG00000005458	Srl	80	77.344	ENSDARG00000112959	CABZ01072309.1	100	77.344	Danio_rerio
ENSCGRG00000005458	Srl	96	96.476	ENSDNOG00000011643	SRL	98	71.846	Dasypus_novemcinctus
ENSCGRG00000005458	Srl	100	97.669	ENSDORG00000014807	Srl	100	97.669	Dipodomys_ordii
ENSCGRG00000005458	Srl	75	68.067	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSCGRG00000005458	Srl	96	96.468	ENSEASG00005000942	SRL	98	71.562	Equus_asinus_asinus
ENSCGRG00000005458	Srl	99	95.763	ENSECAG00000024219	SRL	96	96.681	Equus_caballus
ENSCGRG00000005458	Srl	100	77.618	ENSELUG00000015616	srl	97	79.281	Esox_lucius
ENSCGRG00000005458	Srl	100	94.503	ENSFCAG00000022075	SRL	96	96.689	Felis_catus
ENSCGRG00000005458	Srl	96	89.845	ENSFALG00000004328	SRL	64	90.244	Ficedula_albicollis
ENSCGRG00000005458	Srl	100	98.305	ENSFDAG00000006199	SRL	100	98.305	Fukomys_damarensis
ENSCGRG00000005458	Srl	99	71.546	ENSFHEG00000011854	SRL	98	76.644	Fundulus_heteroclitus
ENSCGRG00000005458	Srl	100	80.720	ENSFHEG00000011239	srl	97	82.159	Fundulus_heteroclitus
ENSCGRG00000005458	Srl	93	81.236	ENSGMOG00000014954	srl	99	81.236	Gadus_morhua
ENSCGRG00000005458	Srl	99	88.535	ENSGALG00000038884	SRL	97	89.059	Gallus_gallus
ENSCGRG00000005458	Srl	94	77.149	ENSGAFG00000016984	SRL	98	76.190	Gambusia_affinis
ENSCGRG00000005458	Srl	100	80.720	ENSGAFG00000000010	srl	99	81.838	Gambusia_affinis
ENSCGRG00000005458	Srl	93	81.898	ENSGACG00000011332	srl	99	81.898	Gasterosteus_aculeatus
ENSCGRG00000005458	Srl	100	95.772	ENSGGOG00000011312	-	96	96.909	Gorilla_gorilla
ENSCGRG00000005458	Srl	98	82.151	ENSHBUG00000007581	srl	98	83.333	Haplochromis_burtoni
ENSCGRG00000005458	Srl	94	72.527	ENSHBUG00000015710	SRL	57	72.747	Haplochromis_burtoni
ENSCGRG00000005458	Srl	100	98.729	ENSHGLG00000015271	SRL	100	98.729	Heterocephalus_glaber_female
ENSCGRG00000005458	Srl	100	98.729	ENSHGLG00100019378	SRL	100	98.729	Heterocephalus_glaber_male
ENSCGRG00000005458	Srl	94	72.627	ENSHCOG00000001012	SRL	50	71.586	Hippocampus_comes
ENSCGRG00000005458	Srl	100	79.873	ENSHCOG00000008687	srl	98	83.484	Hippocampus_comes
ENSCGRG00000005458	Srl	100	79.661	ENSIPUG00000012513	srl	97	80.744	Ictalurus_punctatus
ENSCGRG00000005458	Srl	92	70.183	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSCGRG00000005458	Srl	100	97.458	ENSSTOG00000021151	-	100	97.458	Ictidomys_tridecemlineatus
ENSCGRG00000005458	Srl	100	97.881	ENSJJAG00000016400	Srl	100	97.881	Jaculus_jaculus
ENSCGRG00000005458	Srl	98	80.952	ENSKMAG00000014115	srl	93	85.748	Kryptolebias_marmoratus
ENSCGRG00000005458	Srl	93	76.190	ENSKMAG00000019537	SRL	100	76.190	Kryptolebias_marmoratus
ENSCGRG00000005458	Srl	100	81.144	ENSLBEG00000026643	srl	96	82.743	Labrus_bergylta
ENSCGRG00000005458	Srl	96	74.123	ENSLBEG00000013811	SRL	99	73.581	Labrus_bergylta
ENSCGRG00000005458	Srl	96	85.841	ENSLACG00000002825	SRL	100	85.872	Latimeria_chalumnae
ENSCGRG00000005458	Srl	99	82.766	ENSLOCG00000002644	srl	96	84.768	Lepisosteus_oculatus
ENSCGRG00000005458	Srl	96	96.681	ENSLAFG00000006329	SRL	98	72.644	Loxodonta_africana
ENSCGRG00000005458	Srl	91	97.448	ENSMFAG00000037383	SRL	100	97.448	Macaca_fascicularis
ENSCGRG00000005458	Srl	98	95.662	ENSMNEG00000019236	-	96	96.681	Macaca_nemestrina
ENSCGRG00000005458	Srl	100	88.372	ENSMLEG00000032156	SRL	96	88.596	Mandrillus_leucophaeus
ENSCGRG00000005458	Srl	93	73.789	ENSMAMG00000013756	SRL	53	73.789	Mastacembelus_armatus
ENSCGRG00000005458	Srl	99	80.213	ENSMAMG00000023322	srl	94	84.163	Mastacembelus_armatus
ENSCGRG00000005458	Srl	94	72.747	ENSMZEG00005004010	SRL	69	64.376	Maylandia_zebra
ENSCGRG00000005458	Srl	98	82.151	ENSMZEG00005004548	srl	98	83.333	Maylandia_zebra
ENSCGRG00000005458	Srl	96	90.022	ENSMGAG00000009342	SRL	95	92.042	Meleagris_gallopavo
ENSCGRG00000005458	Srl	96	96.491	ENSMICG00000032307	SRL	96	96.689	Microcebus_murinus
ENSCGRG00000005458	Srl	100	99.153	ENSMOCG00000008208	Srl	100	99.153	Microtus_ochrogaster
ENSCGRG00000005458	Srl	94	83.937	ENSMMOG00000013970	srl	98	83.937	Mola_mola
ENSCGRG00000005458	Srl	93	73.026	ENSMMOG00000021572	SRL	99	72.967	Mola_mola
ENSCGRG00000005458	Srl	96	96.026	ENSMODG00000016380	-	98	66.145	Monodelphis_domestica
ENSCGRG00000005458	Srl	100	80.761	ENSMALG00000005039	srl	98	83.258	Monopterus_albus
ENSCGRG00000005458	Srl	89	76.134	ENSMALG00000000670	SRL	98	74.940	Monopterus_albus
ENSCGRG00000005458	Srl	100	97.458	MGP_CAROLIEiJ_G0020400	Srl	100	97.458	Mus_caroli
ENSCGRG00000005458	Srl	100	97.458	ENSMUSG00000022519	Srl	100	97.458	Mus_musculus
ENSCGRG00000005458	Srl	96	97.566	MGP_PahariEiJ_G0016108	Srl	98	80.480	Mus_pahari
ENSCGRG00000005458	Srl	100	97.458	MGP_SPRETEiJ_G0021294	Srl	100	97.458	Mus_spretus
ENSCGRG00000005458	Srl	96	97.124	ENSMPUG00000015025	SRL	97	73.585	Mustela_putorius_furo
ENSCGRG00000005458	Srl	96	96.681	ENSMLUG00000030733	SRL	99	72.855	Myotis_lucifugus
ENSCGRG00000005458	Srl	100	97.669	ENSNGAG00000019741	Srl	100	97.669	Nannospalax_galili
ENSCGRG00000005458	Srl	98	82.151	ENSNBRG00000023775	srl	97	82.895	Neolamprologus_brichardi
ENSCGRG00000005458	Srl	94	72.747	ENSNBRG00000002422	SRL	70	63.904	Neolamprologus_brichardi
ENSCGRG00000005458	Srl	100	89.429	ENSNLEG00000029051	SRL	96	89.912	Nomascus_leucogenys
ENSCGRG00000005458	Srl	97	90.000	ENSOPRG00000000477	-	98	70.245	Ochotona_princeps
ENSCGRG00000005458	Srl	100	97.246	ENSODEG00000013256	SRL	100	97.246	Octodon_degus
ENSCGRG00000005458	Srl	99	80.892	ENSONIG00000005192	srl	96	82.965	Oreochromis_niloticus
ENSCGRG00000005458	Srl	97	95.652	ENSOCUG00000025140	SRL	98	72.142	Oryctolagus_cuniculus
ENSCGRG00000005458	Srl	100	80.297	ENSORLG00000008291	srl	92	85.309	Oryzias_latipes
ENSCGRG00000005458	Srl	96	74.279	ENSORLG00000015064	SRL	99	73.523	Oryzias_latipes
ENSCGRG00000005458	Srl	96	74.501	ENSORLG00020018173	SRL	99	73.742	Oryzias_latipes_hni
ENSCGRG00000005458	Srl	100	80.508	ENSORLG00020019784	srl	79	85.788	Oryzias_latipes_hni
ENSCGRG00000005458	Srl	100	80.085	ENSORLG00015009342	srl	94	80.568	Oryzias_latipes_hsok
ENSCGRG00000005458	Srl	96	74.501	ENSORLG00015019063	SRL	99	73.742	Oryzias_latipes_hsok
ENSCGRG00000005458	Srl	100	80.297	ENSOMEG00000010006	srl	98	83.409	Oryzias_melastigma
ENSCGRG00000005458	Srl	94	73.085	ENSOMEG00000005682	SRL	64	64.029	Oryzias_melastigma
ENSCGRG00000005458	Srl	96	96.256	ENSOGAG00000029266	SRL	99	72.286	Otolemur_garnettii
ENSCGRG00000005458	Srl	99	94.624	ENSOARG00000003074	SRL	74	94.967	Ovis_aries
ENSCGRG00000005458	Srl	97	96.507	ENSPPAG00000024919	-	100	97.448	Pan_paniscus
ENSCGRG00000005458	Srl	100	94.715	ENSPPRG00000010274	SRL	100	97.216	Panthera_pardus
ENSCGRG00000005458	Srl	100	94.715	ENSPTIG00000015162	SRL	100	97.216	Panthera_tigris_altaica
ENSCGRG00000005458	Srl	100	95.983	ENSPTRG00000007712	SRL	100	97.448	Pan_troglodytes
ENSCGRG00000005458	Srl	98	95.879	ENSPANG00000013804	SRL	97	96.903	Papio_anubis
ENSCGRG00000005458	Srl	98	82.618	ENSPKIG00000006405	srl	97	82.789	Paramormyrops_kingsleyae
ENSCGRG00000005458	Srl	100	74.153	ENSPKIG00000024974	SRL	88	76.697	Paramormyrops_kingsleyae
ENSCGRG00000005458	Srl	96	90.529	ENSPSIG00000008586	SRL	99	59.206	Pelodiscus_sinensis
ENSCGRG00000005458	Srl	94	73.982	ENSPMGG00000023505	-	99	73.756	Periophthalmus_magnuspinnatus
ENSCGRG00000005458	Srl	96	83.444	ENSPMGG00000021081	srl	97	83.628	Periophthalmus_magnuspinnatus
ENSCGRG00000005458	Srl	100	98.517	ENSPEMG00000015842	Srl	100	98.517	Peromyscus_maniculatus_bairdii
ENSCGRG00000005458	Srl	89	67.890	ENSPMAG00000004786	srl	99	67.661	Petromyzon_marinus
ENSCGRG00000005458	Srl	96	95.344	ENSPCIG00000012128	SRL	99	95.354	Phascolarctos_cinereus
ENSCGRG00000005458	Srl	100	79.132	ENSPFOG00000011408	srl	97	80.000	Poecilia_formosa
ENSCGRG00000005458	Srl	97	81.917	ENSPLAG00000008017	srl	99	81.838	Poecilia_latipinna
ENSCGRG00000005458	Srl	94	76.244	ENSPLAG00000002932	SRL	98	75.283	Poecilia_latipinna
ENSCGRG00000005458	Srl	100	80.932	ENSPMEG00000006745	srl	99	81.838	Poecilia_mexicana
ENSCGRG00000005458	Srl	94	73.961	ENSPMEG00000005890	SRL	59	72.867	Poecilia_mexicana
ENSCGRG00000005458	Srl	100	80.508	ENSPREG00000007751	srl	99	83.371	Poecilia_reticulata
ENSCGRG00000005458	Srl	94	77.376	ENSPREG00000000315	SRL	98	76.417	Poecilia_reticulata
ENSCGRG00000005458	Srl	89	97.852	ENSPPYG00000007053	SRL	98	97.852	Pongo_abelii
ENSCGRG00000005458	Srl	96	95.806	ENSPCAG00000003378	-	89	91.935	Procavia_capensis
ENSCGRG00000005458	Srl	100	95.560	ENSPCOG00000023135	SRL	100	97.448	Propithecus_coquereli
ENSCGRG00000005458	Srl	96	97.345	ENSPVAG00000006586	SRL	98	72.780	Pteropus_vampyrus
ENSCGRG00000005458	Srl	98	82.151	ENSPNYG00000001200	srl	98	83.333	Pundamilia_nyererei
ENSCGRG00000005458	Srl	94	72.747	ENSPNYG00000003423	SRL	68	64.738	Pundamilia_nyererei
ENSCGRG00000005458	Srl	100	79.025	ENSPNAG00000023106	srl	97	80.349	Pygocentrus_nattereri
ENSCGRG00000005458	Srl	99	72.281	ENSPNAG00000007361	-	93	73.568	Pygocentrus_nattereri
ENSCGRG00000005458	Srl	97	97.162	ENSRNOG00000005269	Srl	98	81.292	Rattus_norvegicus
ENSCGRG00000005458	Srl	97	95.652	ENSRBIG00000042358	SRL	98	72.444	Rhinopithecus_bieti
ENSCGRG00000005458	Srl	94	97.291	ENSSBOG00000029273	SRL	96	96.689	Saimiri_boliviensis_boliviensis
ENSCGRG00000005458	Srl	97	95.614	ENSSHAG00000011715	-	99	65.406	Sarcophilus_harrisii
ENSCGRG00000005458	Srl	94	76.244	ENSSFOG00015021327	SRL	51	74.672	Scleropages_formosus
ENSCGRG00000005458	Srl	100	78.926	ENSSFOG00015009773	srl	97	83.480	Scleropages_formosus
ENSCGRG00000005458	Srl	100	80.973	ENSSMAG00000016274	srl	99	82.276	Scophthalmus_maximus
ENSCGRG00000005458	Srl	93	73.304	ENSSMAG00000002232	SRL	50	73.187	Scophthalmus_maximus
ENSCGRG00000005458	Srl	94	74.833	ENSSDUG00000009161	SRL	98	75.000	Seriola_dumerili
ENSCGRG00000005458	Srl	94	84.615	ENSSDUG00000010808	srl	97	84.615	Seriola_dumerili
ENSCGRG00000005458	Srl	96	83.444	ENSSLDG00000022024	srl	95	84.615	Seriola_lalandi_dorsalis
ENSCGRG00000005458	Srl	94	74.398	ENSSLDG00000014601	SRL	99	73.904	Seriola_lalandi_dorsalis
ENSCGRG00000005458	Srl	96	90.044	ENSSPUG00000016859	SRL	99	90.066	Sphenodon_punctatus
ENSCGRG00000005458	Srl	93	76.417	ENSSPAG00000014254	SRL	98	75.455	Stegastes_partitus
ENSCGRG00000005458	Srl	100	81.568	ENSSPAG00000019105	srl	96	83.480	Stegastes_partitus
ENSCGRG00000005458	Srl	96	96.468	ENSSSCG00000007949	SRL	99	96.875	Sus_scrofa
ENSCGRG00000005458	Srl	77	92.265	ENSTGUG00000016121	-	96	93.103	Taeniopygia_guttata
ENSCGRG00000005458	Srl	96	89.451	ENSTGUG00000003951	-	99	90.044	Taeniopygia_guttata
ENSCGRG00000005458	Srl	89	76.134	ENSTRUG00000013310	SRL	55	76.134	Takifugu_rubripes
ENSCGRG00000005458	Srl	100	81.144	ENSTRUG00000006005	srl	97	82.379	Takifugu_rubripes
ENSCGRG00000005458	Srl	96	82.159	ENSTNIG00000009739	srl	97	82.159	Tetraodon_nigroviridis
ENSCGRG00000005458	Srl	93	95.909	ENSTTRG00000002709	-	66	95.909	Tursiops_truncatus
ENSCGRG00000005458	Srl	96	97.345	ENSUAMG00000005701	SRL	98	73.939	Ursus_americanus
ENSCGRG00000005458	Srl	96	97.566	ENSUMAG00000002574	SRL	98	74.031	Ursus_maritimus
ENSCGRG00000005458	Srl	96	97.137	ENSVVUG00000016331	-	87	73.734	Vulpes_vulpes
ENSCGRG00000005458	Srl	96	89.159	ENSXETG00000017313	srl	100	89.159	Xenopus_tropicalis
ENSCGRG00000005458	Srl	89	85.273	ENSXCOG00000010424	srl	97	85.273	Xiphophorus_couchianus
ENSCGRG00000005458	Srl	96	75.831	ENSXCOG00000014584	SRL	100	74.723	Xiphophorus_couchianus
ENSCGRG00000005458	Srl	100	80.720	ENSXMAG00000004625	srl	92	82.379	Xiphophorus_maculatus
ENSCGRG00000005458	Srl	94	74.286	ENSXMAG00000027598	SRL	62	74.286	Xiphophorus_maculatus