EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000005587 (Gene tree)
Gene ID: -
Gene Symbol: Lsm8
Alias: 2010003I05Rik|Lsm8
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 8471 bases
Position: chrJH000555.1:16900-25370
Accession: 100756548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000007669	LSM	PF01423.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000007793	-	4341	XM_007645806	ENSCGRP00000007669	85 (aa)	XP_007643996	UPI000177857D

Gene Model

Click here to download ENSCGRG00000005587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000005587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000005587	Lsm8	88	36.000	ENSCGRG00000006554	-	56	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000005587	Lsm8	100	100.000	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSCGRG00000005587	Lsm8	100	95.294	ENSAPOG00000008649	lsm8	89	95.294	Acanthochromis_polyacanthus
ENSCGRG00000005587	Lsm8	100	100.000	ENSAMEG00000001162	LSM8	89	100.000	Ailuropoda_melanoleuca
ENSCGRG00000005587	Lsm8	88	97.333	ENSACIG00000014694	lsm8	100	97.333	Amphilophus_citrinellus
ENSCGRG00000005587	Lsm8	100	95.294	ENSAOCG00000013926	lsm8	89	95.294	Amphiprion_ocellaris
ENSCGRG00000005587	Lsm8	100	95.294	ENSAPEG00000023502	lsm8	89	95.294	Amphiprion_percula
ENSCGRG00000005587	Lsm8	88	97.333	ENSATEG00000023432	lsm8	100	97.333	Anabas_testudineus
ENSCGRG00000005587	Lsm8	100	98.824	ENSAPLG00000005115	LSM8	86	98.824	Anas_platyrhynchos
ENSCGRG00000005587	Lsm8	100	100.000	ENSANAG00000027771	LSM8	100	97.297	Aotus_nancymaae
ENSCGRG00000005587	Lsm8	100	95.294	ENSACLG00000011253	lsm8	89	95.294	Astatotilapia_calliptera
ENSCGRG00000005587	Lsm8	100	97.647	ENSAMXG00000042902	lsm8	89	97.647	Astyanax_mexicanus
ENSCGRG00000005587	Lsm8	100	100.000	ENSBTAG00000012649	LSM8	89	100.000	Bos_taurus
ENSCGRG00000005587	Lsm8	96	58.537	WBGene00003082	lsm-8	84	58.537	Caenorhabditis_elegans
ENSCGRG00000005587	Lsm8	100	100.000	ENSCJAG00000046406	LSM8	100	97.297	Callithrix_jacchus
ENSCGRG00000005587	Lsm8	99	100.000	ENSCAFG00000016459	LSM8	85	100.000	Canis_familiaris
ENSCGRG00000005587	Lsm8	100	100.000	ENSCAFG00020007643	-	89	100.000	Canis_lupus_dingo
ENSCGRG00000005587	Lsm8	100	87.059	ENSCAFG00020012800	-	66	87.059	Canis_lupus_dingo
ENSCGRG00000005587	Lsm8	100	100.000	ENSCHIG00000014201	LSM8	90	100.000	Capra_hircus
ENSCGRG00000005587	Lsm8	100	100.000	ENSTSYG00000032434	LSM8	89	100.000	Carlito_syrichta
ENSCGRG00000005587	Lsm8	87	98.649	ENSCAPG00000008253	LSM8	100	98.649	Cavia_aperea
ENSCGRG00000005587	Lsm8	100	100.000	ENSCPOG00000035673	LSM8	89	100.000	Cavia_porcellus
ENSCGRG00000005587	Lsm8	100	100.000	ENSCCAG00000021329	LSM8	100	97.297	Cebus_capucinus
ENSCGRG00000005587	Lsm8	100	100.000	ENSCATG00000045302	LSM8	100	97.297	Cercocebus_atys
ENSCGRG00000005587	Lsm8	100	100.000	ENSCLAG00000003726	LSM8	89	100.000	Chinchilla_lanigera
ENSCGRG00000005587	Lsm8	100	100.000	ENSCSAG00000010802	-	89	100.000	Chlorocebus_sabaeus
ENSCGRG00000005587	Lsm8	100	97.647	ENSCSAG00000019007	-	89	97.647	Chlorocebus_sabaeus
ENSCGRG00000005587	Lsm8	100	100.000	ENSCPBG00000008154	LSM8	87	100.000	Chrysemys_picta_bellii
ENSCGRG00000005587	Lsm8	99	77.381	ENSCING00000024877	-	88	77.381	Ciona_intestinalis
ENSCGRG00000005587	Lsm8	100	100.000	ENSCANG00000040728	LSM8	100	97.297	Colobus_angolensis_palliatus
ENSCGRG00000005587	Lsm8	100	100.000	ENSCGRG00001000450	Lsm8	89	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000005587	Lsm8	85	95.833	ENSCSEG00000004164	lsm8	79	95.833	Cynoglossus_semilaevis
ENSCGRG00000005587	Lsm8	100	94.118	ENSCVAG00000020547	lsm8	89	94.118	Cyprinodon_variegatus
ENSCGRG00000005587	Lsm8	100	95.294	ENSDARG00000091656	lsm8	89	95.294	Danio_rerio
ENSCGRG00000005587	Lsm8	100	100.000	ENSDNOG00000034613	LSM8	89	100.000	Dasypus_novemcinctus
ENSCGRG00000005587	Lsm8	100	100.000	ENSDORG00000027868	Lsm8	89	100.000	Dipodomys_ordii
ENSCGRG00000005587	Lsm8	100	69.412	FBgn0035271	CG2021	89	69.412	Drosophila_melanogaster
ENSCGRG00000005587	Lsm8	100	98.824	ENSETEG00000011594	LSM8	89	98.824	Echinops_telfairi
ENSCGRG00000005587	Lsm8	87	91.892	ENSEBUG00000012017	lsm8	100	91.892	Eptatretus_burgeri
ENSCGRG00000005587	Lsm8	100	100.000	ENSEASG00005008932	LSM8	55	100.000	Equus_asinus_asinus
ENSCGRG00000005587	Lsm8	100	100.000	ENSECAG00000024025	LSM8	77	100.000	Equus_caballus
ENSCGRG00000005587	Lsm8	100	94.118	ENSELUG00000010138	lsm8	89	94.118	Esox_lucius
ENSCGRG00000005587	Lsm8	91	72.727	ENSFCAG00000044794	-	78	72.727	Felis_catus
ENSCGRG00000005587	Lsm8	100	100.000	ENSFCAG00000036620	-	89	100.000	Felis_catus
ENSCGRG00000005587	Lsm8	100	98.824	ENSFALG00000010023	LSM8	89	98.824	Ficedula_albicollis
ENSCGRG00000005587	Lsm8	100	100.000	ENSFDAG00000019530	LSM8	89	100.000	Fukomys_damarensis
ENSCGRG00000005587	Lsm8	100	95.294	ENSFHEG00000013729	lsm8	89	95.294	Fundulus_heteroclitus
ENSCGRG00000005587	Lsm8	100	98.824	ENSGALG00000009110	LSM8	89	98.824	Gallus_gallus
ENSCGRG00000005587	Lsm8	100	94.118	ENSGAFG00000001135	lsm8	89	94.118	Gambusia_affinis
ENSCGRG00000005587	Lsm8	100	100.000	ENSGAGG00000017366	LSM8	89	100.000	Gopherus_agassizii
ENSCGRG00000005587	Lsm8	100	100.000	ENSGGOG00000041883	LSM8	89	100.000	Gorilla_gorilla
ENSCGRG00000005587	Lsm8	100	95.294	ENSHBUG00000003646	lsm8	89	95.294	Haplochromis_burtoni
ENSCGRG00000005587	Lsm8	100	94.118	ENSHGLG00000019782	-	89	94.118	Heterocephalus_glaber_female
ENSCGRG00000005587	Lsm8	67	100.000	ENSHGLG00000001988	-	83	100.000	Heterocephalus_glaber_female
ENSCGRG00000005587	Lsm8	100	95.294	ENSHGLG00100012166	-	88	95.294	Heterocephalus_glaber_male
ENSCGRG00000005587	Lsm8	99	96.429	ENSHGLG00100003934	-	84	96.429	Heterocephalus_glaber_male
ENSCGRG00000005587	Lsm8	100	94.118	ENSHCOG00000005037	lsm8	89	94.118	Hippocampus_comes
ENSCGRG00000005587	Lsm8	100	97.647	ENSIPUG00000019811	NAA38	89	97.647	Ictalurus_punctatus
ENSCGRG00000005587	Lsm8	100	88.235	ENSSTOG00000034801	-	79	88.235	Ictidomys_tridecemlineatus
ENSCGRG00000005587	Lsm8	100	100.000	ENSSTOG00000009039	LSM8	89	100.000	Ictidomys_tridecemlineatus
ENSCGRG00000005587	Lsm8	100	100.000	ENSJJAG00000009031	Lsm8	88	100.000	Jaculus_jaculus
ENSCGRG00000005587	Lsm8	100	95.294	ENSKMAG00000018983	lsm8	89	95.294	Kryptolebias_marmoratus
ENSCGRG00000005587	Lsm8	100	95.294	ENSLACG00000010231	LSM8	89	95.294	Latimeria_chalumnae
ENSCGRG00000005587	Lsm8	100	96.471	ENSLOCG00000015580	lsm8	89	96.471	Lepisosteus_oculatus
ENSCGRG00000005587	Lsm8	100	100.000	ENSLAFG00000011242	LSM8	88	100.000	Loxodonta_africana
ENSCGRG00000005587	Lsm8	100	96.471	ENSMFAG00000013044	-	89	96.471	Macaca_fascicularis
ENSCGRG00000005587	Lsm8	100	100.000	ENSMFAG00000035798	LSM8	100	97.297	Macaca_fascicularis
ENSCGRG00000005587	Lsm8	100	100.000	ENSMMUG00000046401	LSM8	100	97.297	Macaca_mulatta
ENSCGRG00000005587	Lsm8	88	96.000	ENSMNEG00000011141	-	100	96.000	Macaca_nemestrina
ENSCGRG00000005587	Lsm8	100	100.000	ENSMNEG00000036764	-	100	97.297	Macaca_nemestrina
ENSCGRG00000005587	Lsm8	100	83.529	ENSMLEG00000039324	-	88	83.529	Mandrillus_leucophaeus
ENSCGRG00000005587	Lsm8	100	100.000	ENSMLEG00000035828	-	100	97.297	Mandrillus_leucophaeus
ENSCGRG00000005587	Lsm8	88	97.333	ENSMAMG00000018839	lsm8	100	97.333	Mastacembelus_armatus
ENSCGRG00000005587	Lsm8	100	95.294	ENSMZEG00005019138	lsm8	89	95.294	Maylandia_zebra
ENSCGRG00000005587	Lsm8	100	98.824	ENSMGAG00000008808	LSM8	89	98.824	Meleagris_gallopavo
ENSCGRG00000005587	Lsm8	100	80.000	ENSMAUG00000015356	-	87	80.000	Mesocricetus_auratus
ENSCGRG00000005587	Lsm8	100	91.765	ENSMAUG00000015721	-	88	91.765	Mesocricetus_auratus
ENSCGRG00000005587	Lsm8	85	93.056	ENSMAUG00000020287	-	100	90.541	Mesocricetus_auratus
ENSCGRG00000005587	Lsm8	100	100.000	ENSMICG00000042730	LSM8	89	100.000	Microcebus_murinus
ENSCGRG00000005587	Lsm8	100	100.000	ENSMOCG00000001688	Lsm8	89	100.000	Microtus_ochrogaster
ENSCGRG00000005587	Lsm8	88	97.333	ENSMMOG00000006046	lsm8	100	97.333	Mola_mola
ENSCGRG00000005587	Lsm8	86	86.667	ENSMODG00000015729	LSM8	96	86.667	Monodelphis_domestica
ENSCGRG00000005587	Lsm8	100	96.471	ENSMALG00000000405	lsm8	89	96.471	Monopterus_albus
ENSCGRG00000005587	Lsm8	100	100.000	MGP_CAROLIEiJ_G0028125	-	89	100.000	Mus_caroli
ENSCGRG00000005587	Lsm8	100	100.000	ENSMUSG00000044155	Lsm8	89	100.000	Mus_musculus
ENSCGRG00000005587	Lsm8	100	100.000	MGP_PahariEiJ_G0021881	Lsm8	100	100.000	Mus_pahari
ENSCGRG00000005587	Lsm8	100	100.000	MGP_SPRETEiJ_G0029125	-	89	100.000	Mus_spretus
ENSCGRG00000005587	Lsm8	100	98.824	ENSMLUG00000027762	-	89	98.824	Myotis_lucifugus
ENSCGRG00000005587	Lsm8	100	100.000	ENSMLUG00000006837	-	89	100.000	Myotis_lucifugus
ENSCGRG00000005587	Lsm8	100	100.000	ENSNGAG00000016554	Lsm8	89	100.000	Nannospalax_galili
ENSCGRG00000005587	Lsm8	100	95.294	ENSNBRG00000014441	lsm8	89	95.294	Neolamprologus_brichardi
ENSCGRG00000005587	Lsm8	100	100.000	ENSNLEG00000011768	LSM8	89	100.000	Nomascus_leucogenys
ENSCGRG00000005587	Lsm8	100	87.059	ENSMEUG00000007801	LSM8	88	87.059	Notamacropus_eugenii
ENSCGRG00000005587	Lsm8	100	100.000	ENSOPRG00000014809	LSM8	100	100.000	Ochotona_princeps
ENSCGRG00000005587	Lsm8	100	100.000	ENSODEG00000000418	-	89	100.000	Octodon_degus
ENSCGRG00000005587	Lsm8	88	84.000	ENSODEG00000020290	-	87	84.000	Octodon_degus
ENSCGRG00000005587	Lsm8	100	100.000	ENSOANG00000014536	LSM8	89	100.000	Ornithorhynchus_anatinus
ENSCGRG00000005587	Lsm8	100	100.000	ENSOCUG00000017359	LSM8	88	100.000	Oryctolagus_cuniculus
ENSCGRG00000005587	Lsm8	85	97.222	ENSORLG00000017432	lsm8	77	97.222	Oryzias_latipes
ENSCGRG00000005587	Lsm8	85	97.222	ENSORLG00020004376	lsm8	77	97.222	Oryzias_latipes_hni
ENSCGRG00000005587	Lsm8	100	95.294	ENSORLG00015003757	lsm8	89	95.294	Oryzias_latipes_hsok
ENSCGRG00000005587	Lsm8	81	97.101	ENSOMEG00000022509	lsm8	83	93.333	Oryzias_melastigma
ENSCGRG00000005587	Lsm8	100	100.000	ENSOGAG00000013377	LSM8	89	100.000	Otolemur_garnettii
ENSCGRG00000005587	Lsm8	100	100.000	ENSOARG00000017974	LSM8	89	100.000	Ovis_aries
ENSCGRG00000005587	Lsm8	88	100.000	ENSPPAG00000043228	-	100	100.000	Pan_paniscus
ENSCGRG00000005587	Lsm8	100	100.000	ENSPPRG00000006444	LSM8	89	100.000	Panthera_pardus
ENSCGRG00000005587	Lsm8	100	100.000	ENSPTIG00000004722	LSM8	89	100.000	Panthera_tigris_altaica
ENSCGRG00000005587	Lsm8	88	100.000	ENSPTRG00000046596	-	100	100.000	Pan_troglodytes
ENSCGRG00000005587	Lsm8	100	95.294	ENSPANG00000019395	-	89	95.294	Papio_anubis
ENSCGRG00000005587	Lsm8	100	100.000	ENSPANG00000035470	-	100	97.297	Papio_anubis
ENSCGRG00000005587	Lsm8	100	97.647	ENSPKIG00000006092	lsm8	86	97.647	Paramormyrops_kingsleyae
ENSCGRG00000005587	Lsm8	88	100.000	ENSPSIG00000017054	LSM8	100	100.000	Pelodiscus_sinensis
ENSCGRG00000005587	Lsm8	88	97.333	ENSPMGG00000016442	lsm8	100	97.333	Periophthalmus_magnuspinnatus
ENSCGRG00000005587	Lsm8	87	97.297	ENSPEMG00000009153	Lsm8	100	97.297	Peromyscus_maniculatus_bairdii
ENSCGRG00000005587	Lsm8	96	100.000	ENSPCIG00000021467	LSM8	86	100.000	Phascolarctos_cinereus
ENSCGRG00000005587	Lsm8	100	94.118	ENSPFOG00000012340	lsm8	89	94.118	Poecilia_formosa
ENSCGRG00000005587	Lsm8	100	94.118	ENSPLAG00000000516	lsm8	89	94.118	Poecilia_latipinna
ENSCGRG00000005587	Lsm8	100	94.118	ENSPMEG00000022567	lsm8	89	94.118	Poecilia_mexicana
ENSCGRG00000005587	Lsm8	86	85.000	ENSPREG00000005527	lsm8	72	85.000	Poecilia_reticulata
ENSCGRG00000005587	Lsm8	100	100.000	ENSPPYG00000017942	LSM8	89	100.000	Pongo_abelii
ENSCGRG00000005587	Lsm8	99	77.381	ENSPCOG00000017982	-	86	77.381	Propithecus_coquereli
ENSCGRG00000005587	Lsm8	100	100.000	ENSPCOG00000003309	-	89	100.000	Propithecus_coquereli
ENSCGRG00000005587	Lsm8	100	98.824	ENSPVAG00000000990	LSM8	100	98.824	Pteropus_vampyrus
ENSCGRG00000005587	Lsm8	100	95.294	ENSPNYG00000011448	lsm8	89	95.294	Pundamilia_nyererei
ENSCGRG00000005587	Lsm8	100	97.647	ENSPNAG00000010252	lsm8	89	97.647	Pygocentrus_nattereri
ENSCGRG00000005587	Lsm8	100	100.000	ENSRNOG00000058677	Lsm8	89	100.000	Rattus_norvegicus
ENSCGRG00000005587	Lsm8	100	100.000	ENSRBIG00000032851	LSM8	100	97.297	Rhinopithecus_bieti
ENSCGRG00000005587	Lsm8	100	100.000	ENSRROG00000039618	LSM8	100	97.297	Rhinopithecus_roxellana
ENSCGRG00000005587	Lsm8	100	100.000	ENSSBOG00000023223	LSM8	100	97.297	Saimiri_boliviensis_boliviensis
ENSCGRG00000005587	Lsm8	100	100.000	ENSSHAG00000018435	-	89	100.000	Sarcophilus_harrisii
ENSCGRG00000005587	Lsm8	100	94.118	ENSSFOG00015004412	lsm8	89	94.118	Scleropages_formosus
ENSCGRG00000005587	Lsm8	88	97.333	ENSSMAG00000009458	lsm8	100	97.333	Scophthalmus_maximus
ENSCGRG00000005587	Lsm8	100	95.294	ENSSDUG00000014702	lsm8	89	95.294	Seriola_dumerili
ENSCGRG00000005587	Lsm8	88	97.333	ENSSLDG00000016870	lsm8	100	97.333	Seriola_lalandi_dorsalis
ENSCGRG00000005587	Lsm8	85	100.000	ENSSARG00000009628	-	100	100.000	Sorex_araneus
ENSCGRG00000005587	Lsm8	100	100.000	ENSSPUG00000017419	LSM8	89	100.000	Sphenodon_punctatus
ENSCGRG00000005587	Lsm8	100	95.294	ENSSPAG00000021422	lsm8	89	95.294	Stegastes_partitus
ENSCGRG00000005587	Lsm8	100	100.000	ENSSSCG00000021652	LSM8	89	100.000	Sus_scrofa
ENSCGRG00000005587	Lsm8	100	98.824	ENSTGUG00000004730	-	89	98.824	Taeniopygia_guttata
ENSCGRG00000005587	Lsm8	100	97.647	ENSTGUG00000016823	-	89	97.647	Taeniopygia_guttata
ENSCGRG00000005587	Lsm8	100	95.294	ENSTRUG00000025192	lsm8	89	95.294	Takifugu_rubripes
ENSCGRG00000005587	Lsm8	100	95.294	ENSTNIG00000002864	lsm8	89	95.294	Tetraodon_nigroviridis
ENSCGRG00000005587	Lsm8	100	100.000	ENSTTRG00000001023	LSM8	89	100.000	Tursiops_truncatus
ENSCGRG00000005587	Lsm8	100	100.000	ENSUAMG00000006943	-	89	100.000	Ursus_americanus
ENSCGRG00000005587	Lsm8	100	100.000	ENSUMAG00000003073	LSM8	90	100.000	Ursus_maritimus
ENSCGRG00000005587	Lsm8	100	100.000	ENSVPAG00000001530	LSM8	89	100.000	Vicugna_pacos
ENSCGRG00000005587	Lsm8	88	97.333	ENSVVUG00000013248	-	82	97.333	Vulpes_vulpes
ENSCGRG00000005587	Lsm8	100	97.647	ENSXETG00000021829	lsm8	88	97.647	Xenopus_tropicalis
ENSCGRG00000005587	Lsm8	100	92.941	ENSXCOG00000012938	lsm8	89	92.941	Xiphophorus_couchianus
ENSCGRG00000005587	Lsm8	100	94.118	ENSXMAG00000025919	lsm8	89	94.118	Xiphophorus_maculatus