EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000006022 (Gene tree)
Gene ID: -
Gene Symbol: Larp4b
Alias: D13Wsu64e|Larp5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 50161 bases
Position: chrJH000001.1:8454786-8504946
Accession: 100753870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000008254	La	PF05383.17	1.9e-14	1	1
ENSCGRP00000008253	La	PF05383.17	2e-14	1	1
ENSCGRP00000008252	La	PF05383.17	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000008387	-	1980	-	ENSCGRP00000008253	659 (aa)	-	-
ENSCGRT00000008386	-	5761	XM_003494914	ENSCGRP00000008252	737 (aa)	XP_003494962	UPI00022F3501
ENSCGRT00000008388	-	1962	-	ENSCGRP00000008254	653 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000006022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000006022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000006022	Larp4b	90	49.740	ENSCGRG00000009382	Larp4	93	49.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000006022	Larp4b	100	88.243	ENSG00000107929	LARP4B	100	88.243	Homo_sapiens
ENSCGRG00000006022	Larp4b	100	59.441	ENSAPOG00000020531	LARP4B	100	54.796	Acanthochromis_polyacanthus
ENSCGRG00000006022	Larp4b	100	85.560	ENSAMEG00000001810	LARP4B	100	85.560	Ailuropoda_melanoleuca
ENSCGRG00000006022	Larp4b	86	61.391	ENSAOCG00000007887	-	79	84.768	Amphiprion_ocellaris
ENSCGRG00000006022	Larp4b	93	57.493	ENSAPEG00000002512	LARP4B	98	55.796	Amphiprion_percula
ENSCGRG00000006022	Larp4b	100	60.235	ENSATEG00000012614	LARP4B	100	54.658	Anabas_testudineus
ENSCGRG00000006022	Larp4b	100	78.584	ENSAPLG00000003813	LARP4B	98	76.330	Anas_platyrhynchos
ENSCGRG00000006022	Larp4b	100	73.768	ENSACAG00000002858	LARP4B	100	73.768	Anolis_carolinensis
ENSCGRG00000006022	Larp4b	100	87.703	ENSANAG00000007531	-	100	87.703	Aotus_nancymaae
ENSCGRG00000006022	Larp4b	100	62.139	ENSACLG00000026356	LARP4B	100	56.679	Astatotilapia_calliptera
ENSCGRG00000006022	Larp4b	95	56.876	ENSAMXG00000003335	larp4b	97	52.038	Astyanax_mexicanus
ENSCGRG00000006022	Larp4b	100	82.638	ENSBTAG00000013899	LARP4B	100	82.638	Bos_taurus
ENSCGRG00000006022	Larp4b	100	89.455	ENSCJAG00000018434	LARP4B	100	87.432	Callithrix_jacchus
ENSCGRG00000006022	Larp4b	100	88.070	ENSCAFG00020004209	LARP4B	100	86.301	Canis_lupus_dingo
ENSCGRG00000006022	Larp4b	100	81.965	ENSCHIG00000013543	LARP4B	100	81.965	Capra_hircus
ENSCGRG00000006022	Larp4b	81	90.741	ENSTSYG00000002568	LARP4B	100	90.741	Carlito_syrichta
ENSCGRG00000006022	Larp4b	96	78.933	ENSCAPG00000009725	LARP4B	97	78.652	Cavia_aperea
ENSCGRG00000006022	Larp4b	100	91.037	ENSCPOG00000009375	LARP4B	100	89.324	Cavia_porcellus
ENSCGRG00000006022	Larp4b	100	88.243	ENSCCAG00000024869	LARP4B	100	88.243	Cebus_capucinus
ENSCGRG00000006022	Larp4b	100	88.514	ENSCATG00000019750	LARP4B	100	88.514	Cercocebus_atys
ENSCGRG00000006022	Larp4b	100	91.228	ENSCLAG00000011570	LARP4B	100	89.474	Chinchilla_lanigera
ENSCGRG00000006022	Larp4b	62	94.595	ENSCHOG00000007831	-	66	89.516	Choloepus_hoffmanni
ENSCGRG00000006022	Larp4b	100	78.411	ENSCPBG00000017063	LARP4B	100	76.032	Chrysemys_picta_bellii
ENSCGRG00000006022	Larp4b	100	86.622	ENSCANG00000038021	LARP4B	100	86.622	Colobus_angolensis_palliatus
ENSCGRG00000006022	Larp4b	100	100.000	ENSCGRG00001022930	Larp4b	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000006022	Larp4b	100	53.316	ENSCSEG00000007342	LARP4B	100	53.448	Cynoglossus_semilaevis
ENSCGRG00000006022	Larp4b	100	54.278	ENSCVAG00000008910	LARP4B	100	54.917	Cyprinodon_variegatus
ENSCGRG00000006022	Larp4b	87	58.879	ENSDARG00000062146	larp4b	91	53.768	Danio_rerio
ENSCGRG00000006022	Larp4b	93	87.302	ENSDNOG00000045543	-	100	89.157	Dasypus_novemcinctus
ENSCGRG00000006022	Larp4b	100	89.291	ENSDORG00000009328	Larp4b	100	89.298	Dipodomys_ordii
ENSCGRG00000006022	Larp4b	83	90.756	ENSETEG00000011249	LARP4B	91	83.793	Echinops_telfairi
ENSCGRG00000006022	Larp4b	100	85.830	ENSEASG00005019068	-	100	85.830	Equus_asinus_asinus
ENSCGRG00000006022	Larp4b	100	85.695	ENSECAG00000024040	LARP4B	100	85.695	Equus_caballus
ENSCGRG00000006022	Larp4b	100	81.452	ENSEEUG00000008391	LARP4B	98	81.452	Erinaceus_europaeus
ENSCGRG00000006022	Larp4b	100	59.901	ENSELUG00000008626	LARP4B	100	55.652	Esox_lucius
ENSCGRG00000006022	Larp4b	86	49.005	ENSELUG00000001417	-	94	40.148	Esox_lucius
ENSCGRG00000006022	Larp4b	100	87.193	ENSFCAG00000000721	-	100	85.061	Felis_catus
ENSCGRG00000006022	Larp4b	100	77.029	ENSFALG00000006961	LARP4B	100	74.967	Ficedula_albicollis
ENSCGRG00000006022	Larp4b	100	92.091	ENSFDAG00000006158	LARP4B	97	89.879	Fukomys_damarensis
ENSCGRG00000006022	Larp4b	100	50.518	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSCGRG00000006022	Larp4b	81	63.733	ENSGMOG00000010818	-	98	53.651	Gadus_morhua
ENSCGRG00000006022	Larp4b	100	78.238	ENSGALG00000006672	LARP4B	100	75.729	Gallus_gallus
ENSCGRG00000006022	Larp4b	100	55.699	ENSGACG00000017535	LARP4B	98	56.606	Gasterosteus_aculeatus
ENSCGRG00000006022	Larp4b	91	78.070	ENSGAGG00000008598	LARP4B	99	78.070	Gopherus_agassizii
ENSCGRG00000006022	Larp4b	100	88.108	ENSGGOG00000003572	LARP4B	100	88.108	Gorilla_gorilla
ENSCGRG00000006022	Larp4b	100	61.498	ENSHBUG00000007535	LARP4B	100	56.055	Haplochromis_burtoni
ENSCGRG00000006022	Larp4b	100	92.308	ENSHGLG00000012936	LARP4B	100	92.308	Heterocephalus_glaber_female
ENSCGRG00000006022	Larp4b	100	91.916	ENSHGLG00100016220	-	100	90.283	Heterocephalus_glaber_male
ENSCGRG00000006022	Larp4b	86	76.450	ENSHGLG00100017261	-	100	74.194	Heterocephalus_glaber_male
ENSCGRG00000006022	Larp4b	99	60.775	ENSHCOG00000011581	LARP4B	89	53.867	Hippocampus_comes
ENSCGRG00000006022	Larp4b	92	52.782	ENSIPUG00000009705	larp4b	93	52.639	Ictalurus_punctatus
ENSCGRG00000006022	Larp4b	100	88.410	ENSSTOG00000000587	LARP4B	100	88.410	Ictidomys_tridecemlineatus
ENSCGRG00000006022	Larp4b	100	91.486	ENSJJAG00000020847	Larp4b	100	91.486	Jaculus_jaculus
ENSCGRG00000006022	Larp4b	100	62.847	ENSKMAG00000021674	LARP4B	100	57.036	Kryptolebias_marmoratus
ENSCGRG00000006022	Larp4b	86	59.899	ENSLBEG00000025293	-	81	59.609	Labrus_bergylta
ENSCGRG00000006022	Larp4b	89	71.176	ENSLACG00000009492	LARP4B	99	66.520	Latimeria_chalumnae
ENSCGRG00000006022	Larp4b	100	68.611	ENSLOCG00000012290	larp4b	100	65.138	Lepisosteus_oculatus
ENSCGRG00000006022	Larp4b	100	87.260	ENSLAFG00000015334	LARP4B	100	86.744	Loxodonta_africana
ENSCGRG00000006022	Larp4b	100	88.514	ENSMFAG00000001766	LARP4B	100	86.486	Macaca_fascicularis
ENSCGRG00000006022	Larp4b	100	88.514	ENSMMUG00000005279	LARP4B	100	88.514	Macaca_mulatta
ENSCGRG00000006022	Larp4b	100	88.378	ENSMNEG00000014019	LARP4B	100	86.486	Macaca_nemestrina
ENSCGRG00000006022	Larp4b	100	88.394	ENSMLEG00000035198	LARP4B	100	88.394	Mandrillus_leucophaeus
ENSCGRG00000006022	Larp4b	100	59.933	ENSMAMG00000013742	LARP4B	100	55.335	Mastacembelus_armatus
ENSCGRG00000006022	Larp4b	86	61.630	ENSMZEG00005006498	-	93	72.414	Maylandia_zebra
ENSCGRG00000006022	Larp4b	81	69.912	ENSMZEG00005014594	-	97	57.961	Maylandia_zebra
ENSCGRG00000006022	Larp4b	100	79.029	ENSMGAG00000005472	LARP4B	100	74.301	Meleagris_gallopavo
ENSCGRG00000006022	Larp4b	100	97.432	ENSMAUG00000021657	Larp4b	100	97.715	Mesocricetus_auratus
ENSCGRG00000006022	Larp4b	100	83.831	ENSMICG00000001301	LARP4B	100	82.297	Microcebus_murinus
ENSCGRG00000006022	Larp4b	100	96.526	ENSMOCG00000021452	Larp4b	100	96.526	Microtus_ochrogaster
ENSCGRG00000006022	Larp4b	85	72.414	ENSMMOG00000011253	-	89	60.640	Mola_mola
ENSCGRG00000006022	Larp4b	100	74.142	ENSMODG00000005957	LARP4B	100	74.142	Monodelphis_domestica
ENSCGRG00000006022	Larp4b	100	49.198	ENSMALG00000012432	LARP4B	100	50.401	Monopterus_albus
ENSCGRG00000006022	Larp4b	100	94.872	MGP_CAROLIEiJ_G0018216	Larp4b	100	94.872	Mus_caroli
ENSCGRG00000006022	Larp4b	100	94.872	ENSMUSG00000033499	Larp4b	100	94.872	Mus_musculus
ENSCGRG00000006022	Larp4b	100	94.737	MGP_PahariEiJ_G0019266	Larp4b	100	94.737	Mus_pahari
ENSCGRG00000006022	Larp4b	100	94.737	MGP_SPRETEiJ_G0019074	Larp4b	100	94.737	Mus_spretus
ENSCGRG00000006022	Larp4b	100	86.491	ENSMPUG00000016220	LARP4B	97	84.480	Mustela_putorius_furo
ENSCGRG00000006022	Larp4b	93	84.375	ENSMLUG00000005880	LARP4B	100	82.709	Myotis_lucifugus
ENSCGRG00000006022	Larp4b	100	92.443	ENSNGAG00000001750	Larp4b	100	91.216	Nannospalax_galili
ENSCGRG00000006022	Larp4b	85	72.414	ENSNBRG00000020018	LARP4B	93	72.414	Neolamprologus_brichardi
ENSCGRG00000006022	Larp4b	100	87.703	ENSNLEG00000013442	LARP4B	100	87.703	Nomascus_leucogenys
ENSCGRG00000006022	Larp4b	79	86.842	ENSMEUG00000013114	-	70	86.842	Notamacropus_eugenii
ENSCGRG00000006022	Larp4b	100	92.632	ENSOPRG00000003300	LARP4B	100	87.416	Ochotona_princeps
ENSCGRG00000006022	Larp4b	100	87.160	ENSODEG00000001109	LARP4B	100	91.579	Octodon_degus
ENSCGRG00000006022	Larp4b	100	63.328	ENSONIG00000017705	LARP4B	100	58.333	Oreochromis_niloticus
ENSCGRG00000006022	Larp4b	100	77.273	ENSOANG00000006100	LARP4B	100	74.934	Ornithorhynchus_anatinus
ENSCGRG00000006022	Larp4b	100	88.467	ENSOCUG00000004950	LARP4B	97	88.467	Oryctolagus_cuniculus
ENSCGRG00000006022	Larp4b	100	59.661	ENSORLG00000006080	LARP4B	100	53.567	Oryzias_latipes
ENSCGRG00000006022	Larp4b	100	53.581	ENSORLG00020020940	LARP4B	100	53.708	Oryzias_latipes_hni
ENSCGRG00000006022	Larp4b	100	60.315	ENSORLG00015020608	LARP4B	100	54.300	Oryzias_latipes_hsok
ENSCGRG00000006022	Larp4b	100	58.916	ENSOMEG00000019619	LARP4B	100	53.777	Oryzias_melastigma
ENSCGRG00000006022	Larp4b	93	86.590	ENSOGAG00000011540	LARP4B	100	84.993	Otolemur_garnettii
ENSCGRG00000006022	Larp4b	100	81.903	ENSOARG00000015320	LARP4B	98	81.903	Ovis_aries
ENSCGRG00000006022	Larp4b	100	87.973	ENSPPAG00000039232	LARP4B	100	87.973	Pan_paniscus
ENSCGRG00000006022	Larp4b	100	87.544	ENSPPRG00000009489	LARP4B	100	85.560	Panthera_pardus
ENSCGRG00000006022	Larp4b	100	87.368	ENSPTIG00000008543	LARP4B	100	85.425	Panthera_tigris_altaica
ENSCGRG00000006022	Larp4b	100	87.973	ENSPTRG00000002235	LARP4B	100	87.973	Pan_troglodytes
ENSCGRG00000006022	Larp4b	100	88.514	ENSPANG00000023546	LARP4B	100	86.622	Papio_anubis
ENSCGRG00000006022	Larp4b	99	59.796	ENSPKIG00000012368	LARP4B	99	56.550	Paramormyrops_kingsleyae
ENSCGRG00000006022	Larp4b	85	85.079	ENSPSIG00000005600	LARP4B	99	85.079	Pelodiscus_sinensis
ENSCGRG00000006022	Larp4b	97	59.330	ENSPMGG00000008261	LARP4B	91	53.362	Periophthalmus_magnuspinnatus
ENSCGRG00000006022	Larp4b	100	96.757	ENSPEMG00000014052	Larp4b	100	96.757	Peromyscus_maniculatus_bairdii
ENSCGRG00000006022	Larp4b	100	60.000	ENSPFOG00000000029	LARP4B	100	55.006	Poecilia_formosa
ENSCGRG00000006022	Larp4b	100	60.000	ENSPLAG00000002871	LARP4B	100	54.805	Poecilia_latipinna
ENSCGRG00000006022	Larp4b	100	60.035	ENSPMEG00000016361	LARP4B	100	54.938	Poecilia_mexicana
ENSCGRG00000006022	Larp4b	100	88.259	ENSPPYG00000002035	LARP4B	97	88.259	Pongo_abelii
ENSCGRG00000006022	Larp4b	100	87.873	ENSPCOG00000014688	LARP4B	100	86.486	Propithecus_coquereli
ENSCGRG00000006022	Larp4b	85	94.286	ENSPVAG00000009784	LARP4B	88	94.286	Pteropus_vampyrus
ENSCGRG00000006022	Larp4b	100	62.139	ENSPNYG00000024252	LARP4B	100	56.554	Pundamilia_nyererei
ENSCGRG00000006022	Larp4b	93	58.353	ENSPNAG00000028956	larp4b	95	51.961	Pygocentrus_nattereri
ENSCGRG00000006022	Larp4b	99	95.606	ENSRNOG00000015888	Larp4b	100	95.135	Rattus_norvegicus
ENSCGRG00000006022	Larp4b	100	88.243	ENSRBIG00000033294	LARP4B	100	88.243	Rhinopithecus_bieti
ENSCGRG00000006022	Larp4b	100	87.973	ENSRROG00000033879	LARP4B	100	87.973	Rhinopithecus_roxellana
ENSCGRG00000006022	Larp4b	100	84.211	ENSSBOG00000021109	LARP4B	100	82.297	Saimiri_boliviensis_boliviensis
ENSCGRG00000006022	Larp4b	100	75.467	ENSSHAG00000013392	LARP4B	100	75.467	Sarcophilus_harrisii
ENSCGRG00000006022	Larp4b	91	59.371	ENSSFOG00015003256	LARP4B	90	57.580	Scleropages_formosus
ENSCGRG00000006022	Larp4b	82	75.862	ENSSMAG00000005982	-	99	75.862	Scophthalmus_maximus
ENSCGRG00000006022	Larp4b	100	61.214	ENSSDUG00000006704	LARP4B	100	56.025	Seriola_dumerili
ENSCGRG00000006022	Larp4b	91	72.414	ENSSLDG00000020660	LARP4B	100	72.414	Seriola_lalandi_dorsalis
ENSCGRG00000006022	Larp4b	64	98.113	ENSSARG00000001243	-	79	98.113	Sorex_araneus
ENSCGRG00000006022	Larp4b	100	73.217	ENSSPUG00000002102	-	100	73.217	Sphenodon_punctatus
ENSCGRG00000006022	Larp4b	80	79.796	ENSSPUG00000013734	-	86	86.091	Sphenodon_punctatus
ENSCGRG00000006022	Larp4b	100	55.927	ENSSPAG00000014628	LARP4B	100	55.649	Stegastes_partitus
ENSCGRG00000006022	Larp4b	100	81.242	ENSSSCG00000011162	LARP4B	100	83.443	Sus_scrofa
ENSCGRG00000006022	Larp4b	100	77.990	ENSTGUG00000000811	-	100	75.701	Taeniopygia_guttata
ENSCGRG00000006022	Larp4b	98	63.768	ENSTNIG00000007991	LARP4B	99	54.861	Tetraodon_nigroviridis
ENSCGRG00000006022	Larp4b	100	55.440	ENSTNIG00000004571	-	98	56.088	Tetraodon_nigroviridis
ENSCGRG00000006022	Larp4b	89	88.406	ENSTTRG00000011151	LARP4B	90	87.400	Tursiops_truncatus
ENSCGRG00000006022	Larp4b	95	81.359	ENSUAMG00000016461	LARP4B	95	86.378	Ursus_americanus
ENSCGRG00000006022	Larp4b	100	85.830	ENSUMAG00000016127	LARP4B	100	85.830	Ursus_maritimus
ENSCGRG00000006022	Larp4b	58	94.944	ENSVPAG00000000128	-	73	94.944	Vicugna_pacos
ENSCGRG00000006022	Larp4b	100	87.544	ENSVVUG00000008641	LARP4B	100	85.830	Vulpes_vulpes
ENSCGRG00000006022	Larp4b	99	74.271	ENSXETG00000016882	larp4b	100	70.674	Xenopus_tropicalis
ENSCGRG00000006022	Larp4b	100	56.923	ENSXCOG00000019952	LARP4B	68	85.039	Xiphophorus_couchianus
ENSCGRG00000006022	Larp4b	100	59.689	ENSXMAG00000021533	LARP4B	98	56.430	Xiphophorus_maculatus