EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000006111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein LSM14 homolog B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 7115 bases
Position: chrJH007969.1:806-7920
Accession: 100757966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000008386	FDF	PF09532.10	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000008521	-	1380	XM_007607975	ENSCGRP00000008386	298 (aa)	XP_007606165	-

Gene Model

Click here to download ENSCGRG00000006111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000006111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000006111	-	79	88.983	ENSCGRG00000002484	-	97	88.983
ENSCGRG00000006111	-	90	39.286	ENSCGRG00000004908	Lsm14a	67	40.830

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000006111	-	100	81.208	ENSG00000149657	LSM14B	100	91.935	Homo_sapiens
ENSCGRG00000006111	-	90	41.281	ENSAPOG00000001780	lsm14b	60	41.958	Acanthochromis_polyacanthus
ENSCGRG00000006111	-	100	91.275	ENSAMEG00000013430	LSM14B	70	91.275	Ailuropoda_melanoleuca
ENSCGRG00000006111	-	90	37.591	ENSACIG00000012266	lsm14b	58	37.024	Amphilophus_citrinellus
ENSCGRG00000006111	-	99	38.111	ENSAOCG00000006667	LSM14B	62	37.895	Amphiprion_ocellaris
ENSCGRG00000006111	-	90	40.214	ENSAOCG00000012380	lsm14b	60	40.909	Amphiprion_ocellaris
ENSCGRG00000006111	-	90	35.374	ENSAPEG00000023633	lsm14b	60	38.112	Amphiprion_percula
ENSCGRG00000006111	-	99	41.722	ENSATEG00000015895	LSM14B	81	40.143	Anabas_testudineus
ENSCGRG00000006111	-	90	39.362	ENSATEG00000016603	lsm14b	60	40.418	Anabas_testudineus
ENSCGRG00000006111	-	100	82.667	ENSAPLG00000013203	LSM14B	77	82.667	Anas_platyrhynchos
ENSCGRG00000006111	-	92	66.304	ENSACAG00000016195	LSM14B	61	66.304	Anolis_carolinensis
ENSCGRG00000006111	-	100	92.282	ENSANAG00000037915	LSM14B	70	92.282	Aotus_nancymaae
ENSCGRG00000006111	-	90	35.034	ENSACLG00000019663	lsm14b	60	40.659	Astatotilapia_calliptera
ENSCGRG00000006111	-	90	45.775	ENSAMXG00000002865	lsm14b	62	47.059	Astyanax_mexicanus
ENSCGRG00000006111	-	100	88.255	ENSBTAG00000021558	LSM14B	70	88.255	Bos_taurus
ENSCGRG00000006111	-	100	92.282	ENSCJAG00000014434	LSM14B	70	92.282	Callithrix_jacchus
ENSCGRG00000006111	-	100	90.268	ENSCAFG00000012518	LSM14B	76	90.268	Canis_familiaris
ENSCGRG00000006111	-	100	90.268	ENSCAFG00020022150	LSM14B	70	90.268	Canis_lupus_dingo
ENSCGRG00000006111	-	94	63.929	ENSCHIG00000022681	-	62	70.763	Capra_hircus
ENSCGRG00000006111	-	100	89.597	ENSCHIG00000010284	-	70	89.597	Capra_hircus
ENSCGRG00000006111	-	100	79.530	ENSTSYG00000031914	LSM14B	67	79.530	Carlito_syrichta
ENSCGRG00000006111	-	100	92.617	ENSCAPG00000013059	LSM14B	98	92.617	Cavia_aperea
ENSCGRG00000006111	-	100	92.953	ENSCPOG00000038080	LSM14B	98	92.953	Cavia_porcellus
ENSCGRG00000006111	-	99	77.409	ENSCCAG00000024900	-	97	77.409	Cebus_capucinus
ENSCGRG00000006111	-	100	80.201	ENSCCAG00000021267	LSM14B	67	80.201	Cebus_capucinus
ENSCGRG00000006111	-	100	92.953	ENSCATG00000036006	LSM14B	70	92.953	Cercocebus_atys
ENSCGRG00000006111	-	100	92.617	ENSCLAG00000003186	LSM14B	98	92.617	Chinchilla_lanigera
ENSCGRG00000006111	-	100	93.289	ENSCSAG00000015729	LSM14B	70	93.289	Chlorocebus_sabaeus
ENSCGRG00000006111	-	99	64.189	ENSCHOG00000006997	-	97	64.189	Choloepus_hoffmanni
ENSCGRG00000006111	-	100	82.333	ENSCPBG00000027065	LSM14B	71	82.333	Chrysemys_picta_bellii
ENSCGRG00000006111	-	100	80.537	ENSCANG00000036986	LSM14B	76	80.537	Colobus_angolensis_palliatus
ENSCGRG00000006111	-	100	100.000	ENSCGRG00001018399	Lsm14b	98	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000006111	-	97	37.459	ENSCSEG00000020669	LSM14B	62	37.543	Cynoglossus_semilaevis
ENSCGRG00000006111	-	89	38.194	ENSCSEG00000004722	lsm14b	61	39.116	Cynoglossus_semilaevis
ENSCGRG00000006111	-	97	31.864	ENSCVAG00000012433	-	88	31.295	Cyprinodon_variegatus
ENSCGRG00000006111	-	92	40.288	ENSDARG00000025386	lsm14b	61	39.068	Danio_rerio
ENSCGRG00000006111	-	100	87.584	ENSDNOG00000025246	LSM14B	98	87.584	Dasypus_novemcinctus
ENSCGRG00000006111	-	100	91.946	ENSDORG00000016683	Lsm14b	98	91.946	Dipodomys_ordii
ENSCGRG00000006111	-	83	70.161	ENSETEG00000011188	-	90	70.161	Echinops_telfairi
ENSCGRG00000006111	-	100	60.535	ENSETEG00000001869	-	68	58.194	Echinops_telfairi
ENSCGRG00000006111	-	100	90.940	ENSEASG00005023218	LSM14B	98	90.940	Equus_asinus_asinus
ENSCGRG00000006111	-	100	91.275	ENSECAG00000010659	LSM14B	70	91.275	Equus_caballus
ENSCGRG00000006111	-	97	45.270	ENSELUG00000005780	lsm14b	61	46.377	Esox_lucius
ENSCGRG00000006111	-	90	39.502	ENSELUG00000016299	LSM14B	61	40.210	Esox_lucius
ENSCGRG00000006111	-	100	79.195	ENSFCAG00000003248	LSM14B	67	79.195	Felis_catus
ENSCGRG00000006111	-	100	83.389	ENSFALG00000010618	LSM14B	78	83.389	Ficedula_albicollis
ENSCGRG00000006111	-	100	92.953	ENSFDAG00000002214	LSM14B	98	92.953	Fukomys_damarensis
ENSCGRG00000006111	-	92	36.986	ENSFHEG00000006237	lsm14b	60	35.959	Fundulus_heteroclitus
ENSCGRG00000006111	-	98	39.661	ENSGMOG00000017115	lsm14b	56	36.996	Gadus_morhua
ENSCGRG00000006111	-	100	82.237	ENSGALG00000005125	LSM14B	71	83.553	Gallus_gallus
ENSCGRG00000006111	-	98	36.860	ENSGAFG00000013723	LSM14B	87	35.531	Gambusia_affinis
ENSCGRG00000006111	-	92	39.427	ENSGACG00000009973	lsm14b	61	39.427	Gasterosteus_aculeatus
ENSCGRG00000006111	-	93	70.758	ENSGAGG00000004106	LSM14B	91	81.092	Gopherus_agassizii
ENSCGRG00000006111	-	100	93.289	ENSGGOG00000005630	LSM14B	98	93.289	Gorilla_gorilla
ENSCGRG00000006111	-	100	92.617	ENSHGLG00000015055	LSM14B	98	92.617	Heterocephalus_glaber_female
ENSCGRG00000006111	-	99	92.542	ENSHGLG00100015273	LSM14B	98	92.542	Heterocephalus_glaber_male
ENSCGRG00000006111	-	98	38.000	ENSHCOG00000018747	LSM14B	63	37.367	Hippocampus_comes
ENSCGRG00000006111	-	90	38.662	ENSHCOG00000004867	lsm14b	86	39.416	Hippocampus_comes
ENSCGRG00000006111	-	90	45.588	ENSIPUG00000014946	lsm14b	58	46.209	Ictalurus_punctatus
ENSCGRG00000006111	-	100	94.631	ENSSTOG00000020482	LSM14B	98	94.631	Ictidomys_tridecemlineatus
ENSCGRG00000006111	-	100	95.302	ENSJJAG00000012728	Lsm14b	98	95.302	Jaculus_jaculus
ENSCGRG00000006111	-	90	37.234	ENSKMAG00000017524	lsm14b	61	36.054	Kryptolebias_marmoratus
ENSCGRG00000006111	-	67	44.286	ENSKMAG00000012834	-	88	44.976	Kryptolebias_marmoratus
ENSCGRG00000006111	-	90	65.568	ENSLACG00000003849	LSM14B	70	67.333	Latimeria_chalumnae
ENSCGRG00000006111	-	90	46.931	ENSLOCG00000003746	lsm14b	66	47.518	Lepisosteus_oculatus
ENSCGRG00000006111	-	100	75.168	ENSLAFG00000007492	LSM14B	75	75.168	Loxodonta_africana
ENSCGRG00000006111	-	100	93.624	ENSMFAG00000041479	LSM14B	70	93.624	Macaca_fascicularis
ENSCGRG00000006111	-	100	81.544	ENSMMUG00000014084	LSM14B	67	81.544	Macaca_mulatta
ENSCGRG00000006111	-	100	81.544	ENSMNEG00000045573	LSM14B	67	81.544	Macaca_nemestrina
ENSCGRG00000006111	-	100	80.872	ENSMLEG00000040895	LSM14B	76	80.872	Mandrillus_leucophaeus
ENSCGRG00000006111	-	99	37.954	ENSMAMG00000024124	LSM14B	61	37.857	Mastacembelus_armatus
ENSCGRG00000006111	-	90	41.281	ENSMAMG00000020539	lsm14b	61	41.958	Mastacembelus_armatus
ENSCGRG00000006111	-	90	34.354	ENSMZEG00005000987	lsm14b	60	39.927	Maylandia_zebra
ENSCGRG00000006111	-	93	38.406	ENSMZEG00005026001	LSM14B	65	37.838	Maylandia_zebra
ENSCGRG00000006111	-	100	67.763	ENSMGAG00000005300	LSM14B	74	68.647	Meleagris_gallopavo
ENSCGRG00000006111	-	100	98.658	ENSMAUG00000020700	Lsm14b	98	98.658	Mesocricetus_auratus
ENSCGRG00000006111	-	100	92.282	ENSMICG00000014675	LSM14B	70	92.282	Microcebus_murinus
ENSCGRG00000006111	-	92	82.909	ENSMOCG00000005119	-	93	82.784	Microtus_ochrogaster
ENSCGRG00000006111	-	100	96.980	ENSMOCG00000020600	Lsm14b	98	96.980	Microtus_ochrogaster
ENSCGRG00000006111	-	90	34.386	ENSMMOG00000020042	lsm14b	64	36.364	Mola_mola
ENSCGRG00000006111	-	92	38.351	ENSMMOG00000017321	LSM14B	58	38.351	Mola_mola
ENSCGRG00000006111	-	100	86.913	ENSMODG00000016690	LSM14B	98	86.913	Monodelphis_domestica
ENSCGRG00000006111	-	96	39.726	ENSMALG00000004783	lsm14b	59	39.493	Monopterus_albus
ENSCGRG00000006111	-	92	36.913	ENSMALG00000022251	LSM14B	61	37.627	Monopterus_albus
ENSCGRG00000006111	-	99	96.970	MGP_CAROLIEiJ_G0024770	Lsm14b	70	96.970	Mus_caroli
ENSCGRG00000006111	-	100	96.980	ENSMUSG00000039108	Lsm14b	98	96.980	Mus_musculus
ENSCGRG00000006111	-	100	96.980	MGP_PahariEiJ_G0026214	Lsm14b	70	96.980	Mus_pahari
ENSCGRG00000006111	-	100	96.980	MGP_SPRETEiJ_G0025693	Lsm14b	70	96.980	Mus_spretus
ENSCGRG00000006111	-	100	89.597	ENSMPUG00000007584	LSM14B	74	89.597	Mustela_putorius_furo
ENSCGRG00000006111	-	100	77.258	ENSMLUG00000000304	LSM14B	68	77.258	Myotis_lucifugus
ENSCGRG00000006111	-	75	92.857	ENSNGAG00000016550	Lsm14b	97	92.857	Nannospalax_galili
ENSCGRG00000006111	-	100	80.872	ENSNLEG00000015757	LSM14B	76	80.872	Nomascus_leucogenys
ENSCGRG00000006111	-	100	94.631	ENSODEG00000004099	LSM14B	98	94.631	Octodon_degus
ENSCGRG00000006111	-	90	35.034	ENSONIG00000020318	lsm14b	63	39.116	Oreochromis_niloticus
ENSCGRG00000006111	-	66	69.849	ENSOANG00000003370	LSM14B	52	69.849	Ornithorhynchus_anatinus
ENSCGRG00000006111	-	100	76.174	ENSOCUG00000006279	LSM14B	75	76.174	Oryctolagus_cuniculus
ENSCGRG00000006111	-	90	35.448	ENSORLG00000013525	lsm14b	60	38.828	Oryzias_latipes
ENSCGRG00000006111	-	93	36.207	ENSORLG00000028353	LSM14B	61	34.982	Oryzias_latipes
ENSCGRG00000006111	-	93	33.813	ENSORLG00020018191	-	85	35.055	Oryzias_latipes_hni
ENSCGRG00000006111	-	90	35.448	ENSORLG00020020553	lsm14b	60	38.828	Oryzias_latipes_hni
ENSCGRG00000006111	-	90	35.448	ENSORLG00015016862	lsm14b	60	38.828	Oryzias_latipes_hsok
ENSCGRG00000006111	-	93	35.986	ENSORLG00015013157	LSM14B	61	34.752	Oryzias_latipes_hsok
ENSCGRG00000006111	-	64	39.801	ENSOMEG00000000171	-	97	34.343	Oryzias_melastigma
ENSCGRG00000006111	-	90	34.701	ENSOMEG00000023917	lsm14b	60	38.462	Oryzias_melastigma
ENSCGRG00000006111	-	100	92.282	ENSOGAG00000003915	LSM14B	70	92.282	Otolemur_garnettii
ENSCGRG00000006111	-	100	89.262	ENSOARG00000014706	LSM14B	76	89.262	Ovis_aries
ENSCGRG00000006111	-	100	81.208	ENSPPAG00000035799	LSM14B	71	81.208	Pan_paniscus
ENSCGRG00000006111	-	100	78.859	ENSPPRG00000009197	LSM14B	67	78.859	Panthera_pardus
ENSCGRG00000006111	-	99	90.878	ENSPTIG00000021518	LSM14B	100	90.878	Panthera_tigris_altaica
ENSCGRG00000006111	-	100	81.208	ENSPTRG00000013696	LSM14B	67	81.208	Pan_troglodytes
ENSCGRG00000006111	-	100	81.208	ENSPANG00000011747	LSM14B	67	81.208	Papio_anubis
ENSCGRG00000006111	-	92	46.520	ENSPKIG00000003275	lsm14b	60	46.154	Paramormyrops_kingsleyae
ENSCGRG00000006111	-	100	82.333	ENSPSIG00000014762	LSM14B	98	82.333	Pelodiscus_sinensis
ENSCGRG00000006111	-	100	98.322	ENSPEMG00000017688	Lsm14b	98	98.322	Peromyscus_maniculatus_bairdii
ENSCGRG00000006111	-	100	74.832	ENSPCIG00000013405	LSM14B	67	74.832	Phascolarctos_cinereus
ENSCGRG00000006111	-	99	39.934	ENSPFOG00000005631	lsm14b	62	39.362	Poecilia_formosa
ENSCGRG00000006111	-	91	35.714	ENSPLAG00000005793	LSM14B	61	33.922	Poecilia_latipinna
ENSCGRG00000006111	-	99	38.944	ENSPLAG00000002449	lsm14b	61	36.897	Poecilia_latipinna
ENSCGRG00000006111	-	92	37.943	ENSPMEG00000000745	lsm14b	61	36.552	Poecilia_mexicana
ENSCGRG00000006111	-	91	33.808	ENSPMEG00000022953	LSM14B	61	33.333	Poecilia_mexicana
ENSCGRG00000006111	-	93	38.406	ENSPREG00000007828	LSM14B	87	35.540	Poecilia_reticulata
ENSCGRG00000006111	-	100	73.490	ENSPPYG00000011194	LSM14B	67	71.477	Pongo_abelii
ENSCGRG00000006111	-	100	80.872	ENSPCOG00000013625	LSM14B	67	80.872	Propithecus_coquereli
ENSCGRG00000006111	-	100	66.443	ENSPVAG00000017918	LSM14B	85	68.121	Pteropus_vampyrus
ENSCGRG00000006111	-	90	44.203	ENSPNAG00000012777	lsm14b	61	44.840	Pygocentrus_nattereri
ENSCGRG00000006111	-	100	96.644	ENSRNOG00000054557	Lsm14b	70	96.644	Rattus_norvegicus
ENSCGRG00000006111	-	100	92.617	ENSRBIG00000033461	LSM14B	77	92.617	Rhinopithecus_bieti
ENSCGRG00000006111	-	100	92.953	ENSRROG00000042949	LSM14B	98	92.953	Rhinopithecus_roxellana
ENSCGRG00000006111	-	100	87.261	ENSSBOG00000032820	LSM14B	98	87.261	Saimiri_boliviensis_boliviensis
ENSCGRG00000006111	-	100	86.913	ENSSHAG00000015528	LSM14B	98	86.913	Sarcophilus_harrisii
ENSCGRG00000006111	-	90	46.570	ENSSFOG00015004627	lsm14b	62	47.292	Scleropages_formosus
ENSCGRG00000006111	-	90	38.434	ENSSMAG00000012725	lsm14b	61	39.931	Scophthalmus_maximus
ENSCGRG00000006111	-	99	42.532	ENSSMAG00000000135	LSM14B	62	41.869	Scophthalmus_maximus
ENSCGRG00000006111	-	90	39.007	ENSSDUG00000020977	lsm14b	61	39.310	Seriola_dumerili
ENSCGRG00000006111	-	93	40.484	ENSSDUG00000022770	LSM14B	61	41.404	Seriola_dumerili
ENSCGRG00000006111	-	93	37.589	ENSSLDG00000011354	-	89	40.143	Seriola_lalandi_dorsalis
ENSCGRG00000006111	-	69	80.676	ENSSARG00000007749	-	100	80.676	Sorex_araneus
ENSCGRG00000006111	-	92	81.884	ENSSPUG00000014360	LSM14B	65	81.884	Sphenodon_punctatus
ENSCGRG00000006111	-	97	38.276	ENSSPAG00000018854	-	88	36.496	Stegastes_partitus
ENSCGRG00000006111	-	90	40.000	ENSSPAG00000020915	lsm14b	58	41.091	Stegastes_partitus
ENSCGRG00000006111	-	100	89.262	ENSSSCG00000026052	LSM14B	98	89.262	Sus_scrofa
ENSCGRG00000006111	-	100	70.764	ENSTGUG00000007884	LSM14B	75	70.764	Taeniopygia_guttata
ENSCGRG00000006111	-	99	36.513	ENSTRUG00000011354	lsm14b	60	36.897	Takifugu_rubripes
ENSCGRG00000006111	-	93	38.112	ENSTRUG00000001529	LSM14B	61	37.809	Takifugu_rubripes
ENSCGRG00000006111	-	92	40.351	ENSTNIG00000002445	lsm14b	61	40.351	Tetraodon_nigroviridis
ENSCGRG00000006111	-	100	73.154	ENSTTRG00000011043	LSM14B	67	69.799	Tursiops_truncatus
ENSCGRG00000006111	-	100	91.275	ENSUAMG00000025298	LSM14B	71	91.275	Ursus_americanus
ENSCGRG00000006111	-	100	91.275	ENSUMAG00000000480	LSM14B	71	91.275	Ursus_maritimus
ENSCGRG00000006111	-	100	90.604	ENSVVUG00000015920	LSM14B	98	90.604	Vulpes_vulpes
ENSCGRG00000006111	-	83	67.729	ENSXETG00000001997	lsm14b	68	68.924	Xenopus_tropicalis
ENSCGRG00000006111	-	90	34.892	ENSXMAG00000010013	lsm14b	61	34.708	Xiphophorus_maculatus