EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000006193 (Gene tree)
Gene ID: -
Gene Symbol: Ptcd2
Alias: 1190005P08Rik
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 28420 bases
Position: chrJH000410.1:799445-827864
Accession: 100757791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000008498	MRP-S27	PF10037.9	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000008636	-	2906	XM_003503685	ENSCGRP00000008498	456 (aa)	XP_003503733	-

Gene Model

Click here to download ENSCGRG00000006193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000006193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000006193	Ptcd2	84	74.352	ENSG00000049883	PTCD2	100	77.340	Homo_sapiens
ENSCGRG00000006193	Ptcd2	80	46.322	ENSAPOG00000020682	ptcd2	93	46.322	Acanthochromis_polyacanthus
ENSCGRG00000006193	Ptcd2	84	71.948	ENSAMEG00000007194	PTCD2	99	71.948	Ailuropoda_melanoleuca
ENSCGRG00000006193	Ptcd2	76	43.553	ENSACIG00000002053	ptcd2	100	43.553	Amphilophus_citrinellus
ENSCGRG00000006193	Ptcd2	80	45.232	ENSAOCG00000006616	ptcd2	91	45.232	Amphiprion_ocellaris
ENSCGRG00000006193	Ptcd2	80	45.232	ENSAPEG00000022926	ptcd2	91	45.232	Amphiprion_percula
ENSCGRG00000006193	Ptcd2	79	57.341	ENSACAG00000009747	PTCD2	92	57.341	Anolis_carolinensis
ENSCGRG00000006193	Ptcd2	84	74.093	ENSANAG00000029353	PTCD2	99	74.093	Aotus_nancymaae
ENSCGRG00000006193	Ptcd2	81	46.237	ENSACLG00000027742	ptcd2	95	46.237	Astatotilapia_calliptera
ENSCGRG00000006193	Ptcd2	72	46.061	ENSAMXG00000029404	ptcd2	88	46.061	Astyanax_mexicanus
ENSCGRG00000006193	Ptcd2	84	73.177	ENSBTAG00000014675	PTCD2	100	73.177	Bos_taurus
ENSCGRG00000006193	Ptcd2	84	73.057	ENSCJAG00000016364	PTCD2	99	73.057	Callithrix_jacchus
ENSCGRG00000006193	Ptcd2	93	66.136	ENSCAFG00000007982	PTCD2	100	67.667	Canis_familiaris
ENSCGRG00000006193	Ptcd2	76	73.699	ENSCAFG00020019147	PTCD2	97	73.699	Canis_lupus_dingo
ENSCGRG00000006193	Ptcd2	84	74.740	ENSCHIG00000017118	PTCD2	100	74.740	Capra_hircus
ENSCGRG00000006193	Ptcd2	84	71.279	ENSCPOG00000040168	PTCD2	100	71.279	Cavia_porcellus
ENSCGRG00000006193	Ptcd2	84	73.057	ENSCCAG00000029389	-	99	73.057	Cebus_capucinus
ENSCGRG00000006193	Ptcd2	66	71.667	ENSCCAG00000021996	-	92	71.667	Cebus_capucinus
ENSCGRG00000006193	Ptcd2	84	73.629	ENSCATG00000019069	PTCD2	100	73.629	Cercocebus_atys
ENSCGRG00000006193	Ptcd2	81	74.526	ENSCLAG00000000072	PTCD2	96	74.526	Chinchilla_lanigera
ENSCGRG00000006193	Ptcd2	84	73.629	ENSCSAG00000015623	PTCD2	100	73.629	Chlorocebus_sabaeus
ENSCGRG00000006193	Ptcd2	76	54.598	ENSCHOG00000010634	PTCD2	100	54.598	Choloepus_hoffmanni
ENSCGRG00000006193	Ptcd2	78	56.215	ENSCPBG00000000216	PTCD2	91	56.215	Chrysemys_picta_bellii
ENSCGRG00000006193	Ptcd2	84	72.798	ENSCANG00000035636	PTCD2	99	72.798	Colobus_angolensis_palliatus
ENSCGRG00000006193	Ptcd2	100	100.000	ENSCGRG00001015289	Ptcd2	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000006193	Ptcd2	80	44.687	ENSCVAG00000001285	ptcd2	91	44.687	Cyprinodon_variegatus
ENSCGRG00000006193	Ptcd2	81	45.135	ENSDARG00000035391	ptcd2	96	45.135	Danio_rerio
ENSCGRG00000006193	Ptcd2	84	71.018	ENSDNOG00000008719	PTCD2	100	71.018	Dasypus_novemcinctus
ENSCGRG00000006193	Ptcd2	84	74.160	ENSDORG00000004921	Ptcd2	100	74.160	Dipodomys_ordii
ENSCGRG00000006193	Ptcd2	84	64.691	ENSETEG00000016542	PTCD2	99	64.691	Echinops_telfairi
ENSCGRG00000006193	Ptcd2	84	72.513	ENSEASG00005018038	PTCD2	100	72.513	Equus_asinus_asinus
ENSCGRG00000006193	Ptcd2	81	74.255	ENSECAG00000007022	PTCD2	95	74.255	Equus_caballus
ENSCGRG00000006193	Ptcd2	84	65.885	ENSEEUG00000014031	PTCD2	99	65.885	Erinaceus_europaeus
ENSCGRG00000006193	Ptcd2	77	50.847	ENSELUG00000003584	ptcd2	92	50.847	Esox_lucius
ENSCGRG00000006193	Ptcd2	100	58.952	ENSFCAG00000045432	PTCD2	100	58.952	Felis_catus
ENSCGRG00000006193	Ptcd2	72	52.294	ENSFALG00000010299	PTCD2	99	52.294	Ficedula_albicollis
ENSCGRG00000006193	Ptcd2	84	71.279	ENSFDAG00000018461	PTCD2	100	71.279	Fukomys_damarensis
ENSCGRG00000006193	Ptcd2	77	48.864	ENSGMOG00000003637	ptcd2	91	48.864	Gadus_morhua
ENSCGRG00000006193	Ptcd2	78	50.847	ENSGALG00000038260	PTCD2	93	50.847	Gallus_gallus
ENSCGRG00000006193	Ptcd2	78	60.734	ENSGAGG00000021952	PTCD2	91	60.734	Gopherus_agassizii
ENSCGRG00000006193	Ptcd2	84	74.611	ENSGGOG00000010695	PTCD2	99	74.611	Gorilla_gorilla
ENSCGRG00000006193	Ptcd2	81	46.237	ENSHBUG00000009191	ptcd2	95	46.237	Haplochromis_burtoni
ENSCGRG00000006193	Ptcd2	84	72.063	ENSHGLG00000001234	PTCD2	100	72.063	Heterocephalus_glaber_female
ENSCGRG00000006193	Ptcd2	84	72.063	ENSHGLG00100015419	PTCD2	100	72.063	Heterocephalus_glaber_male
ENSCGRG00000006193	Ptcd2	80	47.283	ENSHCOG00000001703	ptcd2	92	47.283	Hippocampus_comes
ENSCGRG00000006193	Ptcd2	73	45.373	ENSIPUG00000006080	ptcd2	91	45.845	Ictalurus_punctatus
ENSCGRG00000006193	Ptcd2	83	76.053	ENSSTOG00000006596	PTCD2	99	76.053	Ictidomys_tridecemlineatus
ENSCGRG00000006193	Ptcd2	84	77.285	ENSJJAG00000024388	Ptcd2	100	77.285	Jaculus_jaculus
ENSCGRG00000006193	Ptcd2	78	44.231	ENSKMAG00000009329	ptcd2	94	44.231	Kryptolebias_marmoratus
ENSCGRG00000006193	Ptcd2	81	47.978	ENSLBEG00000024871	ptcd2	94	47.978	Labrus_bergylta
ENSCGRG00000006193	Ptcd2	80	55.163	ENSLOCG00000011122	ptcd2	95	55.163	Lepisosteus_oculatus
ENSCGRG00000006193	Ptcd2	68	73.955	ENSLAFG00000004115	PTCD2	100	73.955	Loxodonta_africana
ENSCGRG00000006193	Ptcd2	84	73.575	ENSMFAG00000031516	PTCD2	99	73.575	Macaca_fascicularis
ENSCGRG00000006193	Ptcd2	84	73.629	ENSMNEG00000007537	PTCD2	100	73.629	Macaca_nemestrina
ENSCGRG00000006193	Ptcd2	84	73.834	ENSMLEG00000031093	PTCD2	99	73.834	Mandrillus_leucophaeus
ENSCGRG00000006193	Ptcd2	76	49.425	ENSMAMG00000018529	ptcd2	91	49.425	Mastacembelus_armatus
ENSCGRG00000006193	Ptcd2	81	46.237	ENSMZEG00005003625	ptcd2	95	46.237	Maylandia_zebra
ENSCGRG00000006193	Ptcd2	76	51.724	ENSMGAG00000005033	PTCD2	100	51.724	Meleagris_gallopavo
ENSCGRG00000006193	Ptcd2	84	72.703	ENSMAUG00000020253	Ptcd2	100	72.703	Mesocricetus_auratus
ENSCGRG00000006193	Ptcd2	84	73.438	ENSMICG00000004535	PTCD2	99	73.438	Microcebus_murinus
ENSCGRG00000006193	Ptcd2	84	89.239	ENSMOCG00000019985	Ptcd2	100	89.239	Microtus_ochrogaster
ENSCGRG00000006193	Ptcd2	84	54.688	ENSMODG00000001695	PTCD2	100	54.688	Monodelphis_domestica
ENSCGRG00000006193	Ptcd2	81	46.631	ENSMALG00000022372	ptcd2	94	46.631	Monopterus_albus
ENSCGRG00000006193	Ptcd2	84	80.840	MGP_CAROLIEiJ_G0018829	Ptcd2	100	80.840	Mus_caroli
ENSCGRG00000006193	Ptcd2	84	79.790	ENSMUSG00000021650	Ptcd2	100	79.790	Mus_musculus
ENSCGRG00000006193	Ptcd2	84	82.152	MGP_PahariEiJ_G0015904	Ptcd2	100	82.152	Mus_pahari
ENSCGRG00000006193	Ptcd2	84	80.052	MGP_SPRETEiJ_G0019711	Ptcd2	100	80.052	Mus_spretus
ENSCGRG00000006193	Ptcd2	81	73.713	ENSMPUG00000014401	PTCD2	96	73.713	Mustela_putorius_furo
ENSCGRG00000006193	Ptcd2	84	72.093	ENSMLUG00000007374	PTCD2	100	71.907	Myotis_lucifugus
ENSCGRG00000006193	Ptcd2	84	75.457	ENSNGAG00000005027	Ptcd2	100	75.457	Nannospalax_galili
ENSCGRG00000006193	Ptcd2	81	46.505	ENSNBRG00000008174	ptcd2	97	46.505	Neolamprologus_brichardi
ENSCGRG00000006193	Ptcd2	72	47.130	ENSNBRG00000000092	-	100	47.130	Neolamprologus_brichardi
ENSCGRG00000006193	Ptcd2	84	73.316	ENSNLEG00000004516	PTCD2	99	73.316	Nomascus_leucogenys
ENSCGRG00000006193	Ptcd2	69	51.592	ENSMEUG00000014012	-	82	51.592	Notamacropus_eugenii
ENSCGRG00000006193	Ptcd2	84	68.992	ENSOPRG00000007290	PTCD2	99	68.992	Ochotona_princeps
ENSCGRG00000006193	Ptcd2	79	74.586	ENSODEG00000016417	PTCD2	95	74.586	Octodon_degus
ENSCGRG00000006193	Ptcd2	68	46.602	ENSONIG00000011269	ptcd2	90	46.602	Oreochromis_niloticus
ENSCGRG00000006193	Ptcd2	80	72.329	ENSOCUG00000007970	PTCD2	100	71.279	Oryctolagus_cuniculus
ENSCGRG00000006193	Ptcd2	84	44.473	ENSORLG00000003851	ptcd2	98	44.473	Oryzias_latipes
ENSCGRG00000006193	Ptcd2	76	46.243	ENSORLG00020009823	ptcd2	90	46.243	Oryzias_latipes_hni
ENSCGRG00000006193	Ptcd2	77	46.286	ENSORLG00015016777	ptcd2	99	46.286	Oryzias_latipes_hsok
ENSCGRG00000006193	Ptcd2	76	45.665	ENSOMEG00000012396	ptcd2	84	45.665	Oryzias_melastigma
ENSCGRG00000006193	Ptcd2	84	70.984	ENSOGAG00000008390	PTCD2	99	70.984	Otolemur_garnettii
ENSCGRG00000006193	Ptcd2	84	73.711	ENSOARG00000005087	PTCD2	99	73.711	Ovis_aries
ENSCGRG00000006193	Ptcd2	84	74.611	ENSPPAG00000028480	PTCD2	99	74.611	Pan_paniscus
ENSCGRG00000006193	Ptcd2	84	74.352	ENSPTRG00000016968	PTCD2	99	74.352	Pan_troglodytes
ENSCGRG00000006193	Ptcd2	76	76.812	ENSPANG00000006611	PTCD2	89	76.812	Papio_anubis
ENSCGRG00000006193	Ptcd2	78	48.883	ENSPKIG00000019896	ptcd2	93	48.883	Paramormyrops_kingsleyae
ENSCGRG00000006193	Ptcd2	68	61.415	ENSPSIG00000014559	PTCD2	96	61.415	Pelodiscus_sinensis
ENSCGRG00000006193	Ptcd2	84	86.684	ENSPEMG00000000884	Ptcd2	100	86.684	Peromyscus_maniculatus_bairdii
ENSCGRG00000006193	Ptcd2	79	58.939	ENSPCIG00000029047	PTCD2	93	58.939	Phascolarctos_cinereus
ENSCGRG00000006193	Ptcd2	80	44.414	ENSPLAG00000010456	ptcd2	93	44.414	Poecilia_latipinna
ENSCGRG00000006193	Ptcd2	80	44.687	ENSPREG00000021797	ptcd2	91	44.687	Poecilia_reticulata
ENSCGRG00000006193	Ptcd2	84	64.508	ENSPPYG00000015543	PTCD2	99	64.508	Pongo_abelii
ENSCGRG00000006193	Ptcd2	64	63.014	ENSPCAG00000006806	PTCD2	93	63.014	Procavia_capensis
ENSCGRG00000006193	Ptcd2	85	68.814	ENSPVAG00000010935	PTCD2	100	68.814	Pteropus_vampyrus
ENSCGRG00000006193	Ptcd2	81	46.237	ENSPNYG00000003122	ptcd2	95	46.237	Pundamilia_nyererei
ENSCGRG00000006193	Ptcd2	78	48.603	ENSPNAG00000021490	ptcd2	93	48.603	Pygocentrus_nattereri
ENSCGRG00000006193	Ptcd2	84	81.365	ENSRNOG00000028403	Ptcd2	100	81.365	Rattus_norvegicus
ENSCGRG00000006193	Ptcd2	84	68.653	ENSRBIG00000032929	PTCD2	99	68.653	Rhinopithecus_bieti
ENSCGRG00000006193	Ptcd2	84	72.846	ENSRROG00000000080	PTCD2	100	72.846	Rhinopithecus_roxellana
ENSCGRG00000006193	Ptcd2	84	73.368	ENSSBOG00000018911	PTCD2	100	73.368	Saimiri_boliviensis_boliviensis
ENSCGRG00000006193	Ptcd2	80	58.856	ENSSHAG00000003833	PTCD2	95	58.856	Sarcophilus_harrisii
ENSCGRG00000006193	Ptcd2	77	47.009	ENSSFOG00015015415	ptcd2	91	47.009	Scleropages_formosus
ENSCGRG00000006193	Ptcd2	81	42.663	ENSSMAG00000010350	ptcd2	93	42.663	Scophthalmus_maximus
ENSCGRG00000006193	Ptcd2	80	47.956	ENSSDUG00000008142	ptcd2	89	47.956	Seriola_dumerili
ENSCGRG00000006193	Ptcd2	80	48.229	ENSSLDG00000015284	ptcd2	93	48.229	Seriola_lalandi_dorsalis
ENSCGRG00000006193	Ptcd2	64	64.164	ENSSARG00000004983	PTCD2	94	64.164	Sorex_araneus
ENSCGRG00000006193	Ptcd2	78	53.107	ENSSPUG00000000176	PTCD2	89	53.107	Sphenodon_punctatus
ENSCGRG00000006193	Ptcd2	80	46.049	ENSSPAG00000008591	ptcd2	91	46.049	Stegastes_partitus
ENSCGRG00000006193	Ptcd2	84	74.413	ENSSSCG00000016975	PTCD2	100	70.327	Sus_scrofa
ENSCGRG00000006193	Ptcd2	75	52.035	ENSTGUG00000005705	PTCD2	99	52.035	Taeniopygia_guttata
ENSCGRG00000006193	Ptcd2	84	70.284	ENSTBEG00000016559	PTCD2	99	70.284	Tupaia_belangeri
ENSCGRG00000006193	Ptcd2	84	72.938	ENSTTRG00000011851	PTCD2	99	72.938	Tursiops_truncatus
ENSCGRG00000006193	Ptcd2	93	67.213	ENSUAMG00000007583	PTCD2	100	67.213	Ursus_americanus
ENSCGRG00000006193	Ptcd2	81	73.442	ENSUMAG00000007666	PTCD2	96	73.442	Ursus_maritimus
ENSCGRG00000006193	Ptcd2	85	69.923	ENSVPAG00000009597	PTCD2	100	69.923	Vicugna_pacos
ENSCGRG00000006193	Ptcd2	84	71.279	ENSVVUG00000007299	-	100	71.279	Vulpes_vulpes
ENSCGRG00000006193	Ptcd2	77	54.701	ENSXETG00000031652	PTCD2	92	54.701	Xenopus_tropicalis
ENSCGRG00000006193	Ptcd2	80	44.959	ENSXMAG00000005940	ptcd2	84	44.959	Xiphophorus_maculatus