EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000006229 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 611 bases
Position: chrJH002886.1:84219-84829
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000008541	RRM_5	PF13893.6	1.9e-42	1	2
ENSCGRP00000008541	RRM_5	PF13893.6	1.9e-42	2	2
ENSCGRP00000008541	RRM_1	PF00076.22	4.2e-18	1	2
ENSCGRP00000008541	RRM_1	PF00076.22	4.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000008679	-	594	-	ENSCGRP00000008541	197 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000006229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000006229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000006229	-	98	88.083	ENSG00000011304	PTBP1	100	90.123	Homo_sapiens
ENSCGRG00000006229	-	93	73.224	ENSACLG00000001885	ptbp2b	99	73.224	Astatotilapia_calliptera
ENSCGRG00000006229	-	93	90.217	ENSCJAG00000020162	-	89	90.217	Callithrix_jacchus
ENSCGRG00000006229	-	90	31.053	ENSCAPG00000013604	HNRNPLL	62	31.053	Cavia_aperea
ENSCGRG00000006229	-	83	80.488	ENSCAPG00000009749	-	50	80.488	Cavia_aperea
ENSCGRG00000006229	-	98	87.565	ENSCCAG00000025811	-	98	87.565	Cebus_capucinus
ENSCGRG00000006229	-	98	88.083	ENSCATG00000033337	-	98	88.083	Cercocebus_atys
ENSCGRG00000006229	-	93	62.842	ENSCING00000002002	-	91	62.842	Ciona_intestinalis
ENSCGRG00000006229	-	98	88.083	ENSCANG00000038259	PTBP1	99	88.083	Colobus_angolensis_palliatus
ENSCGRG00000006229	-	98	83.938	ENSCANG00000005173	-	98	83.938	Colobus_angolensis_palliatus
ENSCGRG00000006229	-	94	80.541	ENSCANG00000040666	-	93	80.541	Colobus_angolensis_palliatus
ENSCGRG00000006229	-	95	64.706	ENSCVAG00000021593	-	97	68.208	Cyprinodon_variegatus
ENSCGRG00000006229	-	93	72.131	ENSDARG00000101947	ptbp2a	99	72.131	Danio_rerio
ENSCGRG00000006229	-	93	79.348	ENSDARG00000031907	ptbp1b	69	65.761	Danio_rerio
ENSCGRG00000006229	-	93	77.596	ENSEBUG00000001730	ptbp1a	60	77.596	Eptatretus_burgeri
ENSCGRG00000006229	-	64	31.008	ENSEBUG00000008335	-	64	31.008	Eptatretus_burgeri
ENSCGRG00000006229	-	77	90.066	ENSEASG00005021535	-	100	90.066	Equus_asinus_asinus
ENSCGRG00000006229	-	98	88.083	ENSFCAG00000001219	PTBP1	98	88.083	Felis_catus
ENSCGRG00000006229	-	71	31.293	ENSGAGG00000008379	-	83	31.293	Gopherus_agassizii
ENSCGRG00000006229	-	92	71.271	ENSGGOG00000026783	-	92	67.582	Gorilla_gorilla
ENSCGRG00000006229	-	95	76.471	ENSGGOG00000005090	-	94	81.356	Gorilla_gorilla
ENSCGRG00000006229	-	77	79.470	ENSHBUG00000000040	-	100	79.470	Haplochromis_burtoni
ENSCGRG00000006229	-	72	90.780	ENSHGLG00100004890	-	100	90.780	Heterocephalus_glaber_male
ENSCGRG00000006229	-	93	73.770	ENSHCOG00000015622	-	85	73.770	Hippocampus_comes
ENSCGRG00000006229	-	93	73.770	ENSHCOG00000013349	ptbp2a	76	73.770	Hippocampus_comes
ENSCGRG00000006229	-	98	88.083	ENSMFAG00000038325	-	98	88.083	Macaca_fascicularis
ENSCGRG00000006229	-	98	88.083	ENSMMUG00000016450	-	98	88.083	Macaca_mulatta
ENSCGRG00000006229	-	98	88.083	ENSMNEG00000028851	PTBP1	98	88.083	Macaca_nemestrina
ENSCGRG00000006229	-	98	88.083	ENSMLEG00000013865	PTBP1	99	88.083	Mandrillus_leucophaeus
ENSCGRG00000006229	-	98	88.083	ENSMICG00000007131	PTBP1	98	88.083	Microcebus_murinus
ENSCGRG00000006229	-	91	70.718	ENSMALG00000013144	ptbp3	95	70.718	Monopterus_albus
ENSCGRG00000006229	-	93	73.224	ENSNBRG00000001492	-	82	73.224	Neolamprologus_brichardi
ENSCGRG00000006229	-	98	88.083	ENSNLEG00000000864	PTBP1	99	88.083	Nomascus_leucogenys
ENSCGRG00000006229	-	93	90.217	ENSOPRG00000000964	PTBP1	52	90.217	Ochotona_princeps
ENSCGRG00000006229	-	88	31.746	ENSOANG00000013257	-	79	31.746	Ornithorhynchus_anatinus
ENSCGRG00000006229	-	95	80.214	ENSOANG00000008979	-	99	80.214	Ornithorhynchus_anatinus
ENSCGRG00000006229	-	84	70.482	ENSOMEG00000009759	ptbp2a	100	70.482	Oryzias_melastigma
ENSCGRG00000006229	-	98	88.083	ENSPPAG00000032109	-	98	88.083	Pan_paniscus
ENSCGRG00000006229	-	98	70.769	ENSPPAG00000011962	-	98	70.769	Pan_paniscus
ENSCGRG00000006229	-	98	88.083	ENSPPRG00000006787	PTBP1	98	88.083	Panthera_pardus
ENSCGRG00000006229	-	98	88.083	ENSPTRG00000010165	PTBP1	98	88.083	Pan_troglodytes
ENSCGRG00000006229	-	98	88.083	ENSPANG00000007281	PTBP1	98	88.083	Papio_anubis
ENSCGRG00000006229	-	93	80.435	ENSPMGG00000020540	-	100	77.174	Periophthalmus_magnuspinnatus
ENSCGRG00000006229	-	72	61.972	ENSPMAG00000007617	-	88	61.972	Petromyzon_marinus
ENSCGRG00000006229	-	72	79.433	ENSPREG00000000963	-	100	79.433	Poecilia_reticulata
ENSCGRG00000006229	-	98	88.083	ENSPCOG00000015093	PTBP1	98	88.083	Propithecus_coquereli
ENSCGRG00000006229	-	92	67.033	ENSPNYG00000005126	-	98	67.033	Pundamilia_nyererei
ENSCGRG00000006229	-	96	66.316	ENSRBIG00000026293	-	98	66.316	Rhinopithecus_bieti
ENSCGRG00000006229	-	93	80.435	ENSRBIG00000007193	-	93	80.435	Rhinopithecus_bieti
ENSCGRG00000006229	-	98	88.083	ENSRBIG00000044228	PTBP1	98	88.083	Rhinopithecus_bieti
ENSCGRG00000006229	-	96	67.368	ENSRROG00000044920	-	98	67.368	Rhinopithecus_roxellana
ENSCGRG00000006229	-	94	69.730	ENSRROG00000021572	-	93	69.730	Rhinopithecus_roxellana
ENSCGRG00000006229	-	98	88.083	ENSRROG00000016534	PTBP1	98	88.083	Rhinopithecus_roxellana
ENSCGRG00000006229	-	98	87.565	ENSSBOG00000034376	-	99	87.565	Saimiri_boliviensis_boliviensis
ENSCGRG00000006229	-	58	70.085	ENSSLDG00000009104	-	90	70.085	Seriola_lalandi_dorsalis
ENSCGRG00000006229	-	72	61.111	ENSSPAG00000008968	-	84	61.111	Stegastes_partitus
ENSCGRG00000006229	-	77	73.510	ENSTRUG00000000761	ptbp2a	100	73.510	Takifugu_rubripes
ENSCGRG00000006229	-	72	74.468	ENSUAMG00000011687	-	100	74.468	Ursus_americanus
ENSCGRG00000006229	-	74	88.276	ENSUMAG00000005396	-	99	88.276	Ursus_maritimus
ENSCGRG00000006229	-	83	33.333	ENSXETG00000033350	HNRNPLL	68	33.333	Xenopus_tropicalis
ENSCGRG00000006229	-	93	67.380	ENSXCOG00000007998	ptbp2b	93	67.380	Xiphophorus_couchianus