EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000006378 (Gene tree)
Gene ID: -
Gene Symbol: Xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 51230 bases
Position: chrJH000044.1:596395-647624
Accession: 100770311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000008732	XRN_N	PF03159.18	2.2e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000008871	-	2775	XM_016979465	ENSCGRP00000008732	924 (aa)	XP_016834954	-

Gene Model

Click here to download ENSCGRG00000006378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000006378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000006378	Xrn2	68	39.089	ENSCGRG00000012464	Xrn1	58	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000006378	Xrn2	99	96.009	ENSG00000088930	XRN2	97	96.009	Homo_sapiens
ENSCGRG00000006378	Xrn2	97	71.382	ENSAPOG00000009818	xrn2	97	69.801	Acanthochromis_polyacanthus
ENSCGRG00000006378	Xrn2	99	95.577	ENSAMEG00000012581	XRN2	97	95.577	Ailuropoda_melanoleuca
ENSCGRG00000006378	Xrn2	89	70.012	ENSACIG00000015047	xrn2	90	74.343	Amphilophus_citrinellus
ENSCGRG00000006378	Xrn2	97	71.789	ENSAOCG00000023632	xrn2	97	70.293	Amphiprion_ocellaris
ENSCGRG00000006378	Xrn2	97	71.711	ENSAPEG00000014871	xrn2	97	70.115	Amphiprion_percula
ENSCGRG00000006378	Xrn2	95	70.857	ENSATEG00000001273	xrn2	95	70.185	Anabas_testudineus
ENSCGRG00000006378	Xrn2	99	82.814	ENSAPLG00000013869	XRN2	99	83.244	Anas_platyrhynchos
ENSCGRG00000006378	Xrn2	99	80.998	ENSACAG00000005565	XRN2	97	80.467	Anolis_carolinensis
ENSCGRG00000006378	Xrn2	99	95.361	ENSANAG00000020126	XRN2	97	95.361	Aotus_nancymaae
ENSCGRG00000006378	Xrn2	89	73.365	ENSACLG00000010522	xrn2	77	98.667	Astatotilapia_calliptera
ENSCGRG00000006378	Xrn2	99	70.860	ENSAMXG00000018301	xrn2	97	70.755	Astyanax_mexicanus
ENSCGRG00000006378	Xrn2	99	93.427	ENSBTAG00000011304	XRN2	100	93.215	Bos_taurus
ENSCGRG00000006378	Xrn2	86	54.426	WBGene00006964	xrn-2	85	54.245	Caenorhabditis_elegans
ENSCGRG00000006378	Xrn2	99	95.469	ENSCJAG00000005611	XRN2	97	95.469	Callithrix_jacchus
ENSCGRG00000006378	Xrn2	99	95.577	ENSCAFG00000005185	XRN2	98	95.577	Canis_familiaris
ENSCGRG00000006378	Xrn2	99	95.577	ENSCAFG00020027479	XRN2	97	95.577	Canis_lupus_dingo
ENSCGRG00000006378	Xrn2	99	93.427	ENSCHIG00000006921	XRN2	97	93.427	Capra_hircus
ENSCGRG00000006378	Xrn2	99	94.924	ENSTSYG00000008315	XRN2	97	94.924	Carlito_syrichta
ENSCGRG00000006378	Xrn2	99	81.398	ENSCAPG00000010773	XRN2	99	81.398	Cavia_aperea
ENSCGRG00000006378	Xrn2	99	96.117	ENSCPOG00000009407	XRN2	97	96.117	Cavia_porcellus
ENSCGRG00000006378	Xrn2	99	96.224	ENSCATG00000040350	XRN2	97	96.224	Cercocebus_atys
ENSCGRG00000006378	Xrn2	99	96.009	ENSCLAG00000013419	XRN2	97	96.009	Chinchilla_lanigera
ENSCGRG00000006378	Xrn2	99	96.224	ENSCSAG00000011094	XRN2	97	96.224	Chlorocebus_sabaeus
ENSCGRG00000006378	Xrn2	69	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSCGRG00000006378	Xrn2	99	83.458	ENSCPBG00000023533	XRN2	100	83.369	Chrysemys_picta_bellii
ENSCGRG00000006378	Xrn2	85	58.968	ENSCING00000022336	-	97	59.337	Ciona_intestinalis
ENSCGRG00000006378	Xrn2	98	51.957	ENSCSAVG00000011217	-	95	68.796	Ciona_savignyi
ENSCGRG00000006378	Xrn2	99	96.224	ENSCANG00000040240	XRN2	97	96.224	Colobus_angolensis_palliatus
ENSCGRG00000006378	Xrn2	98	99.226	ENSCGRG00001010676	Xrn2	97	99.226	Cricetulus_griseus_chok1gshd
ENSCGRG00000006378	Xrn2	52	72.407	ENSCSEG00000005628	xrn2	95	72.199	Cynoglossus_semilaevis
ENSCGRG00000006378	Xrn2	89	71.209	ENSCVAG00000018999	xrn2	93	76.954	Cyprinodon_variegatus
ENSCGRG00000006378	Xrn2	99	69.158	ENSDARG00000101900	xrn2	92	77.867	Danio_rerio
ENSCGRG00000006378	Xrn2	99	95.038	ENSDNOG00000001895	XRN2	97	95.038	Dasypus_novemcinctus
ENSCGRG00000006378	Xrn2	99	93.420	ENSDORG00000005434	Xrn2	97	93.420	Dipodomys_ordii
ENSCGRG00000006378	Xrn2	86	54.457	FBgn0031868	Rat1	85	54.367	Drosophila_melanogaster
ENSCGRG00000006378	Xrn2	99	81.769	ENSETEG00000001740	XRN2	90	93.523	Echinops_telfairi
ENSCGRG00000006378	Xrn2	84	71.574	ENSEBUG00000016136	xrn2	99	71.574	Eptatretus_burgeri
ENSCGRG00000006378	Xrn2	99	95.361	ENSEASG00005002484	XRN2	97	95.361	Equus_asinus_asinus
ENSCGRG00000006378	Xrn2	99	95.455	ENSECAG00000018988	XRN2	97	93.439	Equus_caballus
ENSCGRG00000006378	Xrn2	80	82.923	ENSEEUG00000009265	XRN2	78	82.923	Erinaceus_europaeus
ENSCGRG00000006378	Xrn2	99	69.474	ENSELUG00000000552	xrn2	97	69.895	Esox_lucius
ENSCGRG00000006378	Xrn2	99	95.361	ENSFCAG00000007970	XRN2	97	95.361	Felis_catus
ENSCGRG00000006378	Xrn2	99	81.720	ENSFALG00000004508	XRN2	97	82.151	Ficedula_albicollis
ENSCGRG00000006378	Xrn2	99	95.469	ENSFDAG00000016311	XRN2	97	95.469	Fukomys_damarensis
ENSCGRG00000006378	Xrn2	52	69.880	ENSFHEG00000013039	xrn2	75	88.158	Fundulus_heteroclitus
ENSCGRG00000006378	Xrn2	85	72.487	ENSGMOG00000013436	xrn2	97	72.487	Gadus_morhua
ENSCGRG00000006378	Xrn2	99	81.955	ENSGALG00000008372	XRN2	97	81.847	Gallus_gallus
ENSCGRG00000006378	Xrn2	89	73.772	ENSGAFG00000014284	xrn2	95	73.533	Gambusia_affinis
ENSCGRG00000006378	Xrn2	87	74.534	ENSGACG00000011870	xrn2	97	74.534	Gasterosteus_aculeatus
ENSCGRG00000006378	Xrn2	99	83.031	ENSGAGG00000004884	XRN2	97	83.031	Gopherus_agassizii
ENSCGRG00000006378	Xrn2	99	96.224	ENSGGOG00000013738	XRN2	97	96.224	Gorilla_gorilla
ENSCGRG00000006378	Xrn2	52	74.545	ENSHBUG00000005077	xrn2	77	98.667	Haplochromis_burtoni
ENSCGRG00000006378	Xrn2	99	94.606	ENSHGLG00000014831	XRN2	97	94.498	Heterocephalus_glaber_female
ENSCGRG00000006378	Xrn2	99	94.606	ENSHGLG00100013130	XRN2	97	94.498	Heterocephalus_glaber_male
ENSCGRG00000006378	Xrn2	99	67.638	ENSHCOG00000011994	xrn2	97	68.054	Hippocampus_comes
ENSCGRG00000006378	Xrn2	99	69.488	ENSIPUG00000006639	xrn2	97	69.279	Ictalurus_punctatus
ENSCGRG00000006378	Xrn2	99	95.901	ENSSTOG00000000589	XRN2	97	95.901	Ictidomys_tridecemlineatus
ENSCGRG00000006378	Xrn2	99	95.361	ENSJJAG00000022128	Xrn2	97	95.361	Jaculus_jaculus
ENSCGRG00000006378	Xrn2	52	80.165	ENSLBEG00000010041	xrn2	95	79.752	Labrus_bergylta
ENSCGRG00000006378	Xrn2	96	76.000	ENSLACG00000008307	XRN2	98	78.589	Latimeria_chalumnae
ENSCGRG00000006378	Xrn2	99	71.996	ENSLOCG00000016874	xrn2	93	76.095	Lepisosteus_oculatus
ENSCGRG00000006378	Xrn2	99	94.498	ENSLAFG00000014624	XRN2	97	94.498	Loxodonta_africana
ENSCGRG00000006378	Xrn2	99	96.224	ENSMFAG00000038122	XRN2	97	96.224	Macaca_fascicularis
ENSCGRG00000006378	Xrn2	99	96.224	ENSMMUG00000011405	XRN2	97	96.224	Macaca_mulatta
ENSCGRG00000006378	Xrn2	99	96.117	ENSMNEG00000040626	XRN2	97	96.117	Macaca_nemestrina
ENSCGRG00000006378	Xrn2	99	96.117	ENSMLEG00000041897	XRN2	97	96.117	Mandrillus_leucophaeus
ENSCGRG00000006378	Xrn2	95	72.422	ENSMAMG00000008633	xrn2	95	70.874	Mastacembelus_armatus
ENSCGRG00000006378	Xrn2	89	75.386	ENSMZEG00005022362	xrn2	94	75.149	Maylandia_zebra
ENSCGRG00000006378	Xrn2	99	80.642	ENSMGAG00000003196	XRN2	97	80.535	Meleagris_gallopavo
ENSCGRG00000006378	Xrn2	99	97.946	ENSMAUG00000021842	Xrn2	97	97.946	Mesocricetus_auratus
ENSCGRG00000006378	Xrn2	99	95.469	ENSMICG00000008126	XRN2	97	95.469	Microcebus_murinus
ENSCGRG00000006378	Xrn2	99	96.980	ENSMOCG00000012588	Xrn2	97	96.980	Microtus_ochrogaster
ENSCGRG00000006378	Xrn2	89	73.231	ENSMMOG00000017576	xrn2	93	72.877	Mola_mola
ENSCGRG00000006378	Xrn2	99	89.428	ENSMODG00000006163	XRN2	97	89.428	Monodelphis_domestica
ENSCGRG00000006378	Xrn2	90	71.875	ENSMALG00000011355	xrn2	97	71.875	Monopterus_albus
ENSCGRG00000006378	Xrn2	99	96.336	MGP_CAROLIEiJ_G0024400	Xrn2	97	96.336	Mus_caroli
ENSCGRG00000006378	Xrn2	99	96.336	ENSMUSG00000027433	Xrn2	97	96.336	Mus_musculus
ENSCGRG00000006378	Xrn2	99	96.224	MGP_PahariEiJ_G0025843	Xrn2	97	96.224	Mus_pahari
ENSCGRG00000006378	Xrn2	99	96.336	MGP_SPRETEiJ_G0025318	Xrn2	97	96.336	Mus_spretus
ENSCGRG00000006378	Xrn2	99	93.750	ENSMPUG00000001198	XRN2	91	93.750	Mustela_putorius_furo
ENSCGRG00000006378	Xrn2	99	95.038	ENSMLUG00000001536	XRN2	97	95.038	Myotis_lucifugus
ENSCGRG00000006378	Xrn2	99	96.872	ENSNGAG00000018138	Xrn2	97	96.872	Nannospalax_galili
ENSCGRG00000006378	Xrn2	89	75.476	ENSNBRG00000008062	xrn2	77	98.667	Neolamprologus_brichardi
ENSCGRG00000006378	Xrn2	99	96.117	ENSNLEG00000009991	XRN2	97	96.117	Nomascus_leucogenys
ENSCGRG00000006378	Xrn2	68	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSCGRG00000006378	Xrn2	77	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSCGRG00000006378	Xrn2	99	95.254	ENSODEG00000010745	-	97	95.254	Octodon_degus
ENSCGRG00000006378	Xrn2	99	86.041	ENSODEG00000000860	-	98	86.478	Octodon_degus
ENSCGRG00000006378	Xrn2	99	70.719	ENSONIG00000018720	xrn2	97	71.231	Oreochromis_niloticus
ENSCGRG00000006378	Xrn2	99	89.451	ENSOANG00000015673	XRN2	97	89.451	Ornithorhynchus_anatinus
ENSCGRG00000006378	Xrn2	99	96.117	ENSOCUG00000013468	XRN2	97	96.117	Oryctolagus_cuniculus
ENSCGRG00000006378	Xrn2	98	69.968	ENSORLG00000017213	xrn2	94	74.584	Oryzias_latipes
ENSCGRG00000006378	Xrn2	98	69.968	ENSORLG00020001824	xrn2	97	69.829	Oryzias_latipes_hni
ENSCGRG00000006378	Xrn2	98	69.755	ENSORLG00015019747	xrn2	97	69.616	Oryzias_latipes_hsok
ENSCGRG00000006378	Xrn2	89	73.960	ENSOMEG00000019820	xrn2	97	68.333	Oryzias_melastigma
ENSCGRG00000006378	Xrn2	99	95.254	ENSOGAG00000001068	XRN2	97	95.038	Otolemur_garnettii
ENSCGRG00000006378	Xrn2	99	93.427	ENSOARG00000004443	XRN2	100	93.427	Ovis_aries
ENSCGRG00000006378	Xrn2	99	96.224	ENSPPAG00000033549	XRN2	97	96.224	Pan_paniscus
ENSCGRG00000006378	Xrn2	99	95.361	ENSPPRG00000008732	XRN2	97	95.361	Panthera_pardus
ENSCGRG00000006378	Xrn2	99	95.361	ENSPTIG00000015683	XRN2	97	95.361	Panthera_tigris_altaica
ENSCGRG00000006378	Xrn2	99	96.224	ENSPTRG00000013308	XRN2	97	96.224	Pan_troglodytes
ENSCGRG00000006378	Xrn2	99	96.224	ENSPANG00000018088	XRN2	97	96.224	Papio_anubis
ENSCGRG00000006378	Xrn2	99	70.409	ENSPKIG00000016889	xrn2	97	70.199	Paramormyrops_kingsleyae
ENSCGRG00000006378	Xrn2	82	86.104	ENSPSIG00000014666	XRN2	100	85.455	Pelodiscus_sinensis
ENSCGRG00000006378	Xrn2	99	97.411	ENSPEMG00000000111	Xrn2	97	97.411	Peromyscus_maniculatus_bairdii
ENSCGRG00000006378	Xrn2	99	69.412	ENSPFOG00000004182	xrn2	97	70.043	Poecilia_formosa
ENSCGRG00000006378	Xrn2	89	74.251	ENSPLAG00000007351	xrn2	93	74.012	Poecilia_latipinna
ENSCGRG00000006378	Xrn2	97	68.525	ENSPMEG00000011798	xrn2	99	68.988	Poecilia_mexicana
ENSCGRG00000006378	Xrn2	89	74.251	ENSPREG00000012452	xrn2	96	72.402	Poecilia_reticulata
ENSCGRG00000006378	Xrn2	99	95.685	ENSPPYG00000010755	XRN2	97	95.685	Pongo_abelii
ENSCGRG00000006378	Xrn2	99	89.020	ENSPCAG00000011191	XRN2	97	89.020	Procavia_capensis
ENSCGRG00000006378	Xrn2	99	88.134	ENSPCOG00000016468	XRN2	97	88.134	Propithecus_coquereli
ENSCGRG00000006378	Xrn2	92	94.207	ENSPVAG00000004596	XRN2	90	94.207	Pteropus_vampyrus
ENSCGRG00000006378	Xrn2	89	73.246	ENSPNYG00000001765	xrn2	94	73.127	Pundamilia_nyererei
ENSCGRG00000006378	Xrn2	99	70.816	ENSPNAG00000010956	xrn2	97	70.397	Pygocentrus_nattereri
ENSCGRG00000006378	Xrn2	99	96.875	ENSRNOG00000011785	Xrn2	97	96.875	Rattus_norvegicus
ENSCGRG00000006378	Xrn2	85	96.226	ENSRBIG00000036193	XRN2	97	96.226	Rhinopithecus_bieti
ENSCGRG00000006378	Xrn2	99	96.224	ENSRROG00000044400	XRN2	88	96.224	Rhinopithecus_roxellana
ENSCGRG00000006378	Xrn2	67	50.847	YOR048C	RAT1	60	52.430	Saccharomyces_cerevisiae
ENSCGRG00000006378	Xrn2	99	95.685	ENSSBOG00000021014	XRN2	97	95.685	Saimiri_boliviensis_boliviensis
ENSCGRG00000006378	Xrn2	99	71.504	ENSSFOG00015001091	xrn2	97	71.081	Scleropages_formosus
ENSCGRG00000006378	Xrn2	92	72.474	ENSSMAG00000007834	xrn2	97	67.983	Scophthalmus_maximus
ENSCGRG00000006378	Xrn2	90	70.664	ENSSDUG00000012802	xrn2	96	71.711	Seriola_dumerili
ENSCGRG00000006378	Xrn2	92	73.807	ENSSLDG00000021273	xrn2	97	73.690	Seriola_lalandi_dorsalis
ENSCGRG00000006378	Xrn2	76	97.297	ENSSARG00000005859	-	74	97.297	Sorex_araneus
ENSCGRG00000006378	Xrn2	98	78.423	ENSSPUG00000005485	XRN2	93	77.875	Sphenodon_punctatus
ENSCGRG00000006378	Xrn2	99	69.874	ENSSPAG00000016027	xrn2	97	69.748	Stegastes_partitus
ENSCGRG00000006378	Xrn2	99	93.851	ENSSSCG00000007109	XRN2	97	93.851	Sus_scrofa
ENSCGRG00000006378	Xrn2	99	80.407	ENSTGUG00000007535	XRN2	97	80.300	Taeniopygia_guttata
ENSCGRG00000006378	Xrn2	99	67.186	ENSTRUG00000015489	xrn2	97	67.362	Takifugu_rubripes
ENSCGRG00000006378	Xrn2	99	71.047	ENSTNIG00000010712	xrn2	97	70.940	Tetraodon_nigroviridis
ENSCGRG00000006378	Xrn2	99	95.146	ENSTBEG00000004119	XRN2	97	95.146	Tupaia_belangeri
ENSCGRG00000006378	Xrn2	93	96.038	ENSTTRG00000009087	XRN2	90	96.038	Tursiops_truncatus
ENSCGRG00000006378	Xrn2	99	95.685	ENSUAMG00000024634	XRN2	97	95.685	Ursus_americanus
ENSCGRG00000006378	Xrn2	99	95.469	ENSUMAG00000004012	XRN2	95	95.469	Ursus_maritimus
ENSCGRG00000006378	Xrn2	91	88.416	ENSVPAG00000010694	XRN2	91	88.416	Vicugna_pacos
ENSCGRG00000006378	Xrn2	99	95.469	ENSVVUG00000012178	XRN2	97	95.469	Vulpes_vulpes
ENSCGRG00000006378	Xrn2	99	73.241	ENSXETG00000023501	xrn2	97	73.881	Xenopus_tropicalis
ENSCGRG00000006378	Xrn2	99	68.114	ENSXMAG00000000242	xrn2	97	68.671	Xiphophorus_maculatus