EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000006430 (Gene tree)
Gene ID: -
Gene Symbol: Polr1e
Alias: 53kDa|D030019D19Rik|Paf53|Praf1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 14160 bases
Position: chrJH000508.1:849763-863922
Accession: 100751282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000008811	RNA_pol_I_A49	PF06870.12	4.9e-103	1	1
ENSCGRP00000008812	RNA_pol_I_A49	PF06870.12	3.5e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000008954	-	4368	XM_003504795	ENSCGRP00000008811	434 (aa)	XP_003504843	G3HME9
ENSCGRT00000008955	-	1419	-	ENSCGRP00000008812	472 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000006430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000006430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000006430	Polr1e	96	78.469	ENSG00000137054	POLR1E	99	78.469	Homo_sapiens
ENSCGRG00000006430	Polr1e	95	40.723	ENSAPOG00000012452	polr1e	94	58.824	Acanthochromis_polyacanthus
ENSCGRG00000006430	Polr1e	100	73.292	ENSAMEG00000010193	POLR1E	100	73.292	Ailuropoda_melanoleuca
ENSCGRG00000006430	Polr1e	91	42.611	ENSACIG00000009884	polr1e	99	42.532	Amphilophus_citrinellus
ENSCGRG00000006430	Polr1e	95	43.373	ENSAOCG00000005665	polr1e	99	43.373	Amphiprion_ocellaris
ENSCGRG00000006430	Polr1e	95	43.133	ENSAPEG00000020581	polr1e	99	43.133	Amphiprion_percula
ENSCGRG00000006430	Polr1e	95	44.337	ENSATEG00000020609	polr1e	99	44.337	Anabas_testudineus
ENSCGRG00000006430	Polr1e	79	56.430	ENSAPLG00000010340	POLR1E	100	56.430	Anas_platyrhynchos
ENSCGRG00000006430	Polr1e	96	79.187	ENSANAG00000038046	POLR1E	99	79.187	Aotus_nancymaae
ENSCGRG00000006430	Polr1e	97	42.654	ENSACLG00000013685	polr1e	100	42.654	Astatotilapia_calliptera
ENSCGRG00000006430	Polr1e	94	41.889	ENSAMXG00000018181	polr1e	98	41.889	Astyanax_mexicanus
ENSCGRG00000006430	Polr1e	96	82.775	ENSBTAG00000012243	POLR1E	99	82.775	Bos_taurus
ENSCGRG00000006430	Polr1e	91	73.604	ENSCJAG00000010512	POLR1E	93	77.807	Callithrix_jacchus
ENSCGRG00000006430	Polr1e	96	81.579	ENSCAFG00000002377	POLR1E	99	81.579	Canis_familiaris
ENSCGRG00000006430	Polr1e	96	81.818	ENSCAFG00020017851	POLR1E	99	81.818	Canis_lupus_dingo
ENSCGRG00000006430	Polr1e	96	80.622	ENSCHIG00000019479	POLR1E	99	80.622	Capra_hircus
ENSCGRG00000006430	Polr1e	96	79.665	ENSTSYG00000002075	POLR1E	99	79.665	Carlito_syrichta
ENSCGRG00000006430	Polr1e	66	84.375	ENSCAPG00000015653	POLR1E	99	84.375	Cavia_aperea
ENSCGRG00000006430	Polr1e	96	83.732	ENSCPOG00000009965	POLR1E	100	83.732	Cavia_porcellus
ENSCGRG00000006430	Polr1e	96	72.249	ENSCCAG00000029460	POLR1E	99	77.888	Cebus_capucinus
ENSCGRG00000006430	Polr1e	96	78.947	ENSCATG00000031732	POLR1E	99	82.456	Cercocebus_atys
ENSCGRG00000006430	Polr1e	86	83.110	ENSCLAG00000012701	POLR1E	98	83.110	Chinchilla_lanigera
ENSCGRG00000006430	Polr1e	96	78.469	ENSCSAG00000010782	POLR1E	99	78.469	Chlorocebus_sabaeus
ENSCGRG00000006430	Polr1e	91	71.320	ENSCHOG00000013024	POLR1E	83	71.320	Choloepus_hoffmanni
ENSCGRG00000006430	Polr1e	95	65.693	ENSCPBG00000006923	POLR1E	99	65.693	Chrysemys_picta_bellii
ENSCGRG00000006430	Polr1e	96	77.990	ENSCANG00000036112	POLR1E	99	80.870	Colobus_angolensis_palliatus
ENSCGRG00000006430	Polr1e	100	99.576	ENSCGRG00001006197	Polr1e	100	99.576	Cricetulus_griseus_chok1gshd
ENSCGRG00000006430	Polr1e	94	41.262	ENSCSEG00000005121	polr1e	99	41.262	Cynoglossus_semilaevis
ENSCGRG00000006430	Polr1e	95	40.000	ENSCVAG00000019759	polr1e	99	40.000	Cyprinodon_variegatus
ENSCGRG00000006430	Polr1e	91	43.250	ENSDARG00000006434	polr1e	99	43.099	Danio_rerio
ENSCGRG00000006430	Polr1e	97	72.363	ENSDNOG00000010257	POLR1E	99	72.363	Dasypus_novemcinctus
ENSCGRG00000006430	Polr1e	82	75.843	ENSETEG00000018204	POLR1E	99	76.056	Echinops_telfairi
ENSCGRG00000006430	Polr1e	96	81.579	ENSEASG00005000675	POLR1E	99	81.579	Equus_asinus_asinus
ENSCGRG00000006430	Polr1e	96	81.340	ENSECAG00000014669	POLR1E	99	81.340	Equus_caballus
ENSCGRG00000006430	Polr1e	91	69.720	ENSEEUG00000011928	POLR1E	84	69.720	Erinaceus_europaeus
ENSCGRG00000006430	Polr1e	96	43.468	ENSELUG00000008150	polr1e	99	43.468	Esox_lucius
ENSCGRG00000006430	Polr1e	96	80.383	ENSFCAG00000013081	POLR1E	99	80.383	Felis_catus
ENSCGRG00000006430	Polr1e	91	58.122	ENSFALG00000012950	POLR1E	99	58.122	Ficedula_albicollis
ENSCGRG00000006430	Polr1e	96	83.014	ENSFDAG00000016917	POLR1E	100	83.014	Fukomys_damarensis
ENSCGRG00000006430	Polr1e	95	41.247	ENSFHEG00000009801	polr1e	99	41.247	Fundulus_heteroclitus
ENSCGRG00000006430	Polr1e	80	49.524	ENSGMOG00000003336	POLR1E	93	49.524	Gadus_morhua
ENSCGRG00000006430	Polr1e	95	58.981	ENSGALG00000005395	POLR1E	99	58.981	Gallus_gallus
ENSCGRG00000006430	Polr1e	95	41.205	ENSGAFG00000004850	polr1e	99	41.205	Gambusia_affinis
ENSCGRG00000006430	Polr1e	95	39.905	ENSGACG00000016087	polr1e	99	39.905	Gasterosteus_aculeatus
ENSCGRG00000006430	Polr1e	94	58.088	ENSGAGG00000001659	POLR1E	98	68.041	Gopherus_agassizii
ENSCGRG00000006430	Polr1e	96	78.230	ENSGGOG00000001882	POLR1E	99	81.579	Gorilla_gorilla
ENSCGRG00000006430	Polr1e	97	42.654	ENSHBUG00000002559	polr1e	100	42.654	Haplochromis_burtoni
ENSCGRG00000006430	Polr1e	96	82.775	ENSHGLG00000002036	POLR1E	100	82.775	Heterocephalus_glaber_female
ENSCGRG00000006430	Polr1e	96	83.014	ENSHGLG00100012784	POLR1E	100	83.014	Heterocephalus_glaber_male
ENSCGRG00000006430	Polr1e	95	42.169	ENSHCOG00000002774	polr1e	99	42.410	Hippocampus_comes
ENSCGRG00000006430	Polr1e	95	42.206	ENSIPUG00000003019	polr1e	99	42.206	Ictalurus_punctatus
ENSCGRG00000006430	Polr1e	96	81.340	ENSSTOG00000009810	POLR1E	99	81.340	Ictidomys_tridecemlineatus
ENSCGRG00000006430	Polr1e	97	84.010	ENSJJAG00000020731	Polr1e	97	84.010	Jaculus_jaculus
ENSCGRG00000006430	Polr1e	95	40.723	ENSKMAG00000000046	polr1e	99	40.723	Kryptolebias_marmoratus
ENSCGRG00000006430	Polr1e	96	44.391	ENSLBEG00000003104	polr1e	99	44.019	Labrus_bergylta
ENSCGRG00000006430	Polr1e	82	62.604	ENSLACG00000003416	POLR1E	99	62.604	Latimeria_chalumnae
ENSCGRG00000006430	Polr1e	96	49.640	ENSLOCG00000012859	polr1e	99	49.640	Lepisosteus_oculatus
ENSCGRG00000006430	Polr1e	97	80.668	ENSLAFG00000012831	POLR1E	99	80.668	Loxodonta_africana
ENSCGRG00000006430	Polr1e	98	78.118	ENSMFAG00000045465	POLR1E	99	82.456	Macaca_fascicularis
ENSCGRG00000006430	Polr1e	96	78.947	ENSMMUG00000017892	POLR1E	99	82.456	Macaca_mulatta
ENSCGRG00000006430	Polr1e	96	72.897	ENSMNEG00000040283	POLR1E	100	80.531	Macaca_nemestrina
ENSCGRG00000006430	Polr1e	96	78.947	ENSMLEG00000031135	POLR1E	99	82.456	Mandrillus_leucophaeus
ENSCGRG00000006430	Polr1e	96	41.232	ENSMAMG00000001260	polr1e	99	41.232	Mastacembelus_armatus
ENSCGRG00000006430	Polr1e	97	42.891	ENSMZEG00005021536	polr1e	100	42.891	Maylandia_zebra
ENSCGRG00000006430	Polr1e	99	95.843	ENSMAUG00000021044	Polr1e	99	95.843	Mesocricetus_auratus
ENSCGRG00000006430	Polr1e	96	79.426	ENSMICG00000003673	POLR1E	99	79.426	Microcebus_murinus
ENSCGRG00000006430	Polr1e	100	91.475	ENSMOCG00000012920	Polr1e	100	91.475	Microtus_ochrogaster
ENSCGRG00000006430	Polr1e	95	42.619	ENSMMOG00000007391	polr1e	99	42.619	Mola_mola
ENSCGRG00000006430	Polr1e	91	69.949	ENSMODG00000002884	POLR1E	97	69.949	Monodelphis_domestica
ENSCGRG00000006430	Polr1e	97	42.019	ENSMALG00000002665	polr1e	100	42.019	Monopterus_albus
ENSCGRG00000006430	Polr1e	100	85.945	MGP_CAROLIEiJ_G0025967	Polr1e	100	85.945	Mus_caroli
ENSCGRG00000006430	Polr1e	100	87.327	ENSMUSG00000028318	Polr1e	100	87.327	Mus_musculus
ENSCGRG00000006430	Polr1e	99	87.991	MGP_PahariEiJ_G0024114	Polr1e	99	87.991	Mus_pahari
ENSCGRG00000006430	Polr1e	100	87.097	MGP_SPRETEiJ_G0026930	Polr1e	100	87.097	Mus_spretus
ENSCGRG00000006430	Polr1e	97	74.681	ENSMPUG00000006040	POLR1E	99	74.681	Mustela_putorius_furo
ENSCGRG00000006430	Polr1e	98	78.638	ENSMLUG00000012688	POLR1E	98	78.638	Myotis_lucifugus
ENSCGRG00000006430	Polr1e	99	84.758	ENSNGAG00000002520	Polr1e	99	84.758	Nannospalax_galili
ENSCGRG00000006430	Polr1e	95	43.373	ENSNBRG00000016822	polr1e	98	43.373	Neolamprologus_brichardi
ENSCGRG00000006430	Polr1e	96	78.230	ENSNLEG00000003616	POLR1E	99	81.579	Nomascus_leucogenys
ENSCGRG00000006430	Polr1e	72	75.000	ENSMEUG00000015372	-	80	75.000	Notamacropus_eugenii
ENSCGRG00000006430	Polr1e	69	92.000	ENSOPRG00000014206	POLR1E	91	92.000	Ochotona_princeps
ENSCGRG00000006430	Polr1e	99	82.326	ENSODEG00000014565	POLR1E	100	82.326	Octodon_degus
ENSCGRG00000006430	Polr1e	100	42.438	ENSONIG00000008921	polr1e	100	43.365	Oreochromis_niloticus
ENSCGRG00000006430	Polr1e	96	79.665	ENSOCUG00000024773	POLR1E	99	79.665	Oryctolagus_cuniculus
ENSCGRG00000006430	Polr1e	95	42.169	ENSORLG00000005143	polr1e	99	42.169	Oryzias_latipes
ENSCGRG00000006430	Polr1e	89	41.753	ENSORLG00020007271	polr1e	99	41.753	Oryzias_latipes_hni
ENSCGRG00000006430	Polr1e	95	42.169	ENSORLG00015000137	polr1e	99	42.169	Oryzias_latipes_hsok
ENSCGRG00000006430	Polr1e	97	40.706	ENSOMEG00000013264	polr1e	99	40.706	Oryzias_melastigma
ENSCGRG00000006430	Polr1e	98	81.176	ENSOGAG00000012981	POLR1E	99	81.176	Otolemur_garnettii
ENSCGRG00000006430	Polr1e	97	80.668	ENSOARG00000011465	POLR1E	97	80.668	Ovis_aries
ENSCGRG00000006430	Polr1e	96	78.469	ENSPPAG00000034566	POLR1E	99	82.456	Pan_paniscus
ENSCGRG00000006430	Polr1e	96	80.144	ENSPPRG00000005649	POLR1E	99	80.144	Panthera_pardus
ENSCGRG00000006430	Polr1e	96	80.144	ENSPTIG00000009774	POLR1E	99	80.144	Panthera_tigris_altaica
ENSCGRG00000006430	Polr1e	96	78.469	ENSPTRG00000020944	POLR1E	99	82.456	Pan_troglodytes
ENSCGRG00000006430	Polr1e	96	78.947	ENSPANG00000025563	POLR1E	99	82.456	Papio_anubis
ENSCGRG00000006430	Polr1e	95	45.084	ENSPKIG00000003562	polr1e	99	45.084	Paramormyrops_kingsleyae
ENSCGRG00000006430	Polr1e	91	61.000	ENSPSIG00000003274	POLR1E	92	61.000	Pelodiscus_sinensis
ENSCGRG00000006430	Polr1e	91	43.641	ENSPMGG00000024169	polr1e	96	43.641	Periophthalmus_magnuspinnatus
ENSCGRG00000006430	Polr1e	100	92.627	ENSPEMG00000019151	-	100	92.627	Peromyscus_maniculatus_bairdii
ENSCGRG00000006430	Polr1e	100	76.092	ENSPEMG00000022300	-	100	76.092	Peromyscus_maniculatus_bairdii
ENSCGRG00000006430	Polr1e	91	70.202	ENSPCIG00000014798	POLR1E	97	70.202	Phascolarctos_cinereus
ENSCGRG00000006430	Polr1e	96	40.315	ENSPFOG00000019627	polr1e	99	40.315	Poecilia_formosa
ENSCGRG00000006430	Polr1e	95	41.928	ENSPLAG00000022679	polr1e	99	41.928	Poecilia_latipinna
ENSCGRG00000006430	Polr1e	82	42.105	ENSPMEG00000022123	polr1e	93	42.105	Poecilia_mexicana
ENSCGRG00000006430	Polr1e	95	41.446	ENSPREG00000009470	polr1e	99	41.446	Poecilia_reticulata
ENSCGRG00000006430	Polr1e	96	77.990	ENSPPYG00000019061	POLR1E	99	77.990	Pongo_abelii
ENSCGRG00000006430	Polr1e	70	65.789	ENSPCAG00000004891	POLR1E	100	65.789	Procavia_capensis
ENSCGRG00000006430	Polr1e	96	79.904	ENSPCOG00000027448	POLR1E	99	79.904	Propithecus_coquereli
ENSCGRG00000006430	Polr1e	91	83.461	ENSPVAG00000007940	POLR1E	83	83.461	Pteropus_vampyrus
ENSCGRG00000006430	Polr1e	97	42.891	ENSPNYG00000001032	polr1e	100	42.891	Pundamilia_nyererei
ENSCGRG00000006430	Polr1e	91	41.562	ENSPNAG00000006987	polr1e	95	41.562	Pygocentrus_nattereri
ENSCGRG00000006430	Polr1e	100	88.940	ENSRNOG00000012664	Polr1e	100	88.940	Rattus_norvegicus
ENSCGRG00000006430	Polr1e	93	77.970	ENSRBIG00000034214	POLR1E	99	78.947	Rhinopithecus_bieti
ENSCGRG00000006430	Polr1e	96	78.469	ENSRROG00000031986	POLR1E	99	82.456	Rhinopithecus_roxellana
ENSCGRG00000006430	Polr1e	94	79.268	ENSSBOG00000021415	POLR1E	98	79.268	Saimiri_boliviensis_boliviensis
ENSCGRG00000006430	Polr1e	83	68.333	ENSSHAG00000016084	POLR1E	100	68.333	Sarcophilus_harrisii
ENSCGRG00000006430	Polr1e	94	44.878	ENSSFOG00015002293	polr1e	98	44.878	Scleropages_formosus
ENSCGRG00000006430	Polr1e	97	45.626	ENSSMAG00000011672	polr1e	94	45.626	Scophthalmus_maximus
ENSCGRG00000006430	Polr1e	97	43.128	ENSSDUG00000022279	polr1e	100	43.128	Seriola_dumerili
ENSCGRG00000006430	Polr1e	97	43.128	ENSSLDG00000024918	polr1e	100	43.128	Seriola_lalandi_dorsalis
ENSCGRG00000006430	Polr1e	62	71.429	ENSSARG00000009810	-	67	71.429	Sorex_araneus
ENSCGRG00000006430	Polr1e	95	64.407	ENSSPUG00000009499	POLR1E	99	64.407	Sphenodon_punctatus
ENSCGRG00000006430	Polr1e	95	43.373	ENSSPAG00000021240	polr1e	99	43.373	Stegastes_partitus
ENSCGRG00000006430	Polr1e	97	82.100	ENSSSCG00000005347	POLR1E	100	82.100	Sus_scrofa
ENSCGRG00000006430	Polr1e	92	50.673	ENSTGUG00000007169	POLR1E	100	50.673	Taeniopygia_guttata
ENSCGRG00000006430	Polr1e	95	41.346	ENSTRUG00000020779	polr1e	99	41.732	Takifugu_rubripes
ENSCGRG00000006430	Polr1e	95	42.005	ENSTNIG00000017812	polr1e	99	41.928	Tetraodon_nigroviridis
ENSCGRG00000006430	Polr1e	99	77.598	ENSTBEG00000013786	POLR1E	90	77.598	Tupaia_belangeri
ENSCGRG00000006430	Polr1e	91	81.818	ENSTTRG00000008294	POLR1E	84	81.818	Tursiops_truncatus
ENSCGRG00000006430	Polr1e	96	81.818	ENSUAMG00000012474	POLR1E	100	82.834	Ursus_americanus
ENSCGRG00000006430	Polr1e	96	81.818	ENSUMAG00000011496	POLR1E	99	81.818	Ursus_maritimus
ENSCGRG00000006430	Polr1e	79	77.713	ENSVPAG00000009048	POLR1E	81	77.713	Vicugna_pacos
ENSCGRG00000006430	Polr1e	96	81.579	ENSVVUG00000019954	POLR1E	99	81.579	Vulpes_vulpes
ENSCGRG00000006430	Polr1e	94	49.395	ENSXETG00000006533	polr1e	99	49.395	Xenopus_tropicalis
ENSCGRG00000006430	Polr1e	95	41.446	ENSXCOG00000013706	polr1e	99	41.446	Xiphophorus_couchianus
ENSCGRG00000006430	Polr1e	95	42.823	ENSXMAG00000012484	polr1e	99	42.823	Xiphophorus_maculatus