EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000006722 (Gene tree)
Gene ID: -
Gene Symbol: Cmss1
Alias: 1110001A06Rik|2610528E23Rik|4930572F24Rik
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 26090 bases
Position: chrJH000519.1:635600-661689
Accession: 100757899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000009184	CMS1	PF14617.6	9.7e-32	1	1
ENSCGRP00000009184	DEAD	PF00270.29	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000009333	-	4407	XM_016976845	ENSCGRP00000009184	257 (aa)	XP_016832334	-

Gene Model

Click here to download ENSCGRG00000006722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000006722's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000006722	Cmss1	99	83.137	ENSG00000184220	CMSS1	98	90.000	Homo_sapiens
ENSCGRG00000006722	Cmss1	79	62.871	ENSAPOG00000010604	cmss1	99	55.870	Acanthochromis_polyacanthus
ENSCGRG00000006722	Cmss1	99	82.031	ENSAMEG00000004092	CMSS1	98	82.031	Ailuropoda_melanoleuca
ENSCGRG00000006722	Cmss1	79	51.980	ENSACIG00000021854	cmss1	75	51.980	Amphilophus_citrinellus
ENSCGRG00000006722	Cmss1	79	61.881	ENSAOCG00000013361	cmss1	70	61.881	Amphiprion_ocellaris
ENSCGRG00000006722	Cmss1	79	61.881	ENSAPEG00000005829	cmss1	70	61.881	Amphiprion_percula
ENSCGRG00000006722	Cmss1	88	59.649	ENSATEG00000008209	cmss1	79	59.389	Anabas_testudineus
ENSCGRG00000006722	Cmss1	89	67.826	ENSAPLG00000010542	CMSS1	100	66.957	Anas_platyrhynchos
ENSCGRG00000006722	Cmss1	99	61.923	ENSACAG00000011065	CMSS1	95	62.692	Anolis_carolinensis
ENSCGRG00000006722	Cmss1	99	81.569	ENSANAG00000023565	CMSS1	97	81.569	Aotus_nancymaae
ENSCGRG00000006722	Cmss1	79	59.901	ENSACLG00000027294	cmss1	69	59.901	Astatotilapia_calliptera
ENSCGRG00000006722	Cmss1	78	55.000	ENSAMXG00000002046	cmss1	78	52.174	Astyanax_mexicanus
ENSCGRG00000006722	Cmss1	97	82.329	ENSBTAG00000013663	CMSS1	93	81.641	Bos_taurus
ENSCGRG00000006722	Cmss1	99	81.961	ENSCJAG00000000610	CMSS1	97	81.961	Callithrix_jacchus
ENSCGRG00000006722	Cmss1	99	83.203	ENSCAFG00000009230	CMSS1	93	83.203	Canis_familiaris
ENSCGRG00000006722	Cmss1	99	83.203	ENSCAFG00020009464	-	93	83.203	Canis_lupus_dingo
ENSCGRG00000006722	Cmss1	90	77.155	ENSCAFG00020024156	-	72	77.155	Canis_lupus_dingo
ENSCGRG00000006722	Cmss1	99	80.859	ENSCHIG00000013003	CMSS1	93	80.859	Capra_hircus
ENSCGRG00000006722	Cmss1	99	80.078	ENSTSYG00000009266	CMSS1	98	80.078	Carlito_syrichta
ENSCGRG00000006722	Cmss1	87	69.869	ENSCAPG00000013584	CMSS1	100	68.261	Cavia_aperea
ENSCGRG00000006722	Cmss1	99	79.688	ENSCPOG00000014680	CMSS1	92	79.688	Cavia_porcellus
ENSCGRG00000006722	Cmss1	99	82.353	ENSCCAG00000034685	CMSS1	97	82.353	Cebus_capucinus
ENSCGRG00000006722	Cmss1	99	83.594	ENSCATG00000031980	CMSS1	98	83.594	Cercocebus_atys
ENSCGRG00000006722	Cmss1	89	83.843	ENSCLAG00000011241	CMSS1	98	83.843	Chinchilla_lanigera
ENSCGRG00000006722	Cmss1	95	84.898	ENSCSAG00000006024	CMSS1	100	84.898	Chlorocebus_sabaeus
ENSCGRG00000006722	Cmss1	99	63.672	ENSCHOG00000012098	CMSS1	93	63.672	Choloepus_hoffmanni
ENSCGRG00000006722	Cmss1	77	42.211	ENSCING00000014848	-	99	43.316	Ciona_intestinalis
ENSCGRG00000006722	Cmss1	99	83.203	ENSCANG00000031337	CMSS1	98	83.203	Colobus_angolensis_palliatus
ENSCGRG00000006722	Cmss1	100	99.611	ENSCGRG00001014305	Cmss1	92	99.611	Cricetulus_griseus_chok1gshd
ENSCGRG00000006722	Cmss1	79	61.881	ENSCSEG00000004958	cmss1	77	59.556	Cynoglossus_semilaevis
ENSCGRG00000006722	Cmss1	79	59.901	ENSCVAG00000005039	cmss1	70	59.901	Cyprinodon_variegatus
ENSCGRG00000006722	Cmss1	88	51.948	ENSDARG00000112579	cmss1	84	49.593	Danio_rerio
ENSCGRG00000006722	Cmss1	99	78.824	ENSDNOG00000040418	CMSS1	91	78.824	Dasypus_novemcinctus
ENSCGRG00000006722	Cmss1	99	81.250	ENSDORG00000010461	Cmss1	92	81.250	Dipodomys_ordii
ENSCGRG00000006722	Cmss1	51	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSCGRG00000006722	Cmss1	91	81.974	ENSEASG00005010966	CMSS1	99	83.562	Equus_asinus_asinus
ENSCGRG00000006722	Cmss1	99	79.688	ENSECAG00000015662	CMSS1	100	82.379	Equus_caballus
ENSCGRG00000006722	Cmss1	89	60.526	ENSEEUG00000007624	-	82	59.211	Erinaceus_europaeus
ENSCGRG00000006722	Cmss1	79	62.871	ENSELUG00000019459	cmss1	81	58.848	Esox_lucius
ENSCGRG00000006722	Cmss1	99	84.436	ENSFCAG00000044577	CMSS1	92	84.436	Felis_catus
ENSCGRG00000006722	Cmss1	92	65.401	ENSFALG00000005816	CMSS1	100	65.401	Ficedula_albicollis
ENSCGRG00000006722	Cmss1	89	83.333	ENSFDAG00000012577	CMSS1	100	83.333	Fukomys_damarensis
ENSCGRG00000006722	Cmss1	88	59.130	ENSFHEG00000012008	cmss1	95	59.130	Fundulus_heteroclitus
ENSCGRG00000006722	Cmss1	79	60.396	ENSGMOG00000016729	cmss1	72	60.396	Gadus_morhua
ENSCGRG00000006722	Cmss1	91	67.521	ENSGALG00000015267	CMSS1	90	67.521	Gallus_gallus
ENSCGRG00000006722	Cmss1	80	62.136	ENSGAFG00000021217	cmss1	77	61.881	Gambusia_affinis
ENSCGRG00000006722	Cmss1	79	55.446	ENSGACG00000002798	cmss1	72	55.446	Gasterosteus_aculeatus
ENSCGRG00000006722	Cmss1	100	66.540	ENSGAGG00000019861	CMSS1	99	66.540	Gopherus_agassizii
ENSCGRG00000006722	Cmss1	99	82.812	ENSGGOG00000014125	CMSS1	98	82.812	Gorilla_gorilla
ENSCGRG00000006722	Cmss1	79	59.901	ENSHBUG00000008431	cmss1	71	59.901	Haplochromis_burtoni
ENSCGRG00000006722	Cmss1	97	80.321	ENSHGLG00000019481	CMSS1	98	80.321	Heterocephalus_glaber_female
ENSCGRG00000006722	Cmss1	99	79.377	ENSHGLG00100010314	CMSS1	100	79.377	Heterocephalus_glaber_male
ENSCGRG00000006722	Cmss1	85	60.731	ENSHCOG00000003222	cmss1	74	60.731	Hippocampus_comes
ENSCGRG00000006722	Cmss1	86	54.955	ENSIPUG00000011591	cmss1	77	54.955	Ictalurus_punctatus
ENSCGRG00000006722	Cmss1	99	81.250	ENSSTOG00000019366	CMSS1	92	82.031	Ictidomys_tridecemlineatus
ENSCGRG00000006722	Cmss1	99	80.859	ENSJJAG00000014894	Cmss1	90	86.634	Jaculus_jaculus
ENSCGRG00000006722	Cmss1	86	46.914	ENSKMAG00000002390	cmss1	81	51.980	Kryptolebias_marmoratus
ENSCGRG00000006722	Cmss1	79	57.635	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSCGRG00000006722	Cmss1	89	63.913	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSCGRG00000006722	Cmss1	88	57.269	ENSLOCG00000009391	cmss1	84	55.462	Lepisosteus_oculatus
ENSCGRG00000006722	Cmss1	89	83.772	ENSLAFG00000017509	CMSS1	100	83.772	Loxodonta_africana
ENSCGRG00000006722	Cmss1	99	83.594	ENSMFAG00000045006	CMSS1	98	83.594	Macaca_fascicularis
ENSCGRG00000006722	Cmss1	99	83.203	ENSMMUG00000002939	CMSS1	98	84.091	Macaca_mulatta
ENSCGRG00000006722	Cmss1	99	83.203	ENSMNEG00000031315	CMSS1	98	83.203	Macaca_nemestrina
ENSCGRG00000006722	Cmss1	99	83.203	ENSMLEG00000033660	CMSS1	98	83.203	Mandrillus_leucophaeus
ENSCGRG00000006722	Cmss1	88	58.079	ENSMAMG00000017176	cmss1	79	58.079	Mastacembelus_armatus
ENSCGRG00000006722	Cmss1	79	59.901	ENSMZEG00005021886	cmss1	69	59.901	Maylandia_zebra
ENSCGRG00000006722	Cmss1	89	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSCGRG00000006722	Cmss1	100	70.428	ENSMAUG00000020609	Cmss1	91	70.428	Mesocricetus_auratus
ENSCGRG00000006722	Cmss1	98	84.064	ENSMICG00000048977	CMSS1	97	84.064	Microcebus_murinus
ENSCGRG00000006722	Cmss1	100	87.938	ENSMOCG00000021937	Cmss1	92	87.938	Microtus_ochrogaster
ENSCGRG00000006722	Cmss1	79	58.911	ENSMMOG00000019794	cmss1	94	55.217	Mola_mola
ENSCGRG00000006722	Cmss1	100	71.648	ENSMODG00000002275	CMSS1	97	71.648	Monodelphis_domestica
ENSCGRG00000006722	Cmss1	79	61.881	ENSMALG00000004250	cmss1	78	58.772	Monopterus_albus
ENSCGRG00000006722	Cmss1	99	87.938	MGP_CAROLIEiJ_G0020824	Cmss1	92	87.938	Mus_caroli
ENSCGRG00000006722	Cmss1	99	89.105	ENSMUSG00000022748	Cmss1	92	89.105	Mus_musculus
ENSCGRG00000006722	Cmss1	99	87.549	MGP_PahariEiJ_G0016524	Cmss1	92	87.549	Mus_pahari
ENSCGRG00000006722	Cmss1	99	88.716	MGP_SPRETEiJ_G0021724	Cmss1	92	88.716	Mus_spretus
ENSCGRG00000006722	Cmss1	95	85.656	ENSMPUG00000011324	CMSS1	98	84.314	Mustela_putorius_furo
ENSCGRG00000006722	Cmss1	99	83.333	ENSMLUG00000001131	CMSS1	98	83.333	Myotis_lucifugus
ENSCGRG00000006722	Cmss1	99	85.938	ENSNGAG00000020316	Cmss1	92	85.938	Nannospalax_galili
ENSCGRG00000006722	Cmss1	79	59.406	ENSNBRG00000003095	cmss1	69	59.406	Neolamprologus_brichardi
ENSCGRG00000006722	Cmss1	99	83.203	ENSNLEG00000034172	CMSS1	98	83.203	Nomascus_leucogenys
ENSCGRG00000006722	Cmss1	89	62.719	ENSMEUG00000014505	CMSS1	100	62.719	Notamacropus_eugenii
ENSCGRG00000006722	Cmss1	100	83.721	ENSOPRG00000002986	CMSS1	93	83.721	Ochotona_princeps
ENSCGRG00000006722	Cmss1	99	67.969	ENSODEG00000001853	-	92	67.969	Octodon_degus
ENSCGRG00000006722	Cmss1	99	79.688	ENSODEG00000005226	-	92	79.688	Octodon_degus
ENSCGRG00000006722	Cmss1	100	75.097	ENSODEG00000003558	-	91	75.097	Octodon_degus
ENSCGRG00000006722	Cmss1	94	67.635	ENSODEG00000009446	-	93	67.220	Octodon_degus
ENSCGRG00000006722	Cmss1	79	58.911	ENSONIG00000006678	cmss1	77	58.911	Oreochromis_niloticus
ENSCGRG00000006722	Cmss1	99	71.094	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSCGRG00000006722	Cmss1	99	83.984	ENSOCUG00000025366	CMSS1	93	83.984	Oryctolagus_cuniculus
ENSCGRG00000006722	Cmss1	94	58.678	ENSORLG00000020340	cmss1	84	58.678	Oryzias_latipes
ENSCGRG00000006722	Cmss1	89	51.965	ENSORLG00020012235	cmss1	99	51.502	Oryzias_latipes_hni
ENSCGRG00000006722	Cmss1	79	55.941	ENSORLG00015015551	cmss1	75	55.941	Oryzias_latipes_hsok
ENSCGRG00000006722	Cmss1	91	60.000	ENSOMEG00000012555	cmss1	80	60.000	Oryzias_melastigma
ENSCGRG00000006722	Cmss1	89	85.088	ENSOGAG00000002045	CMSS1	100	85.088	Otolemur_garnettii
ENSCGRG00000006722	Cmss1	99	80.934	ENSOARG00000017899	CMSS1	88	80.934	Ovis_aries
ENSCGRG00000006722	Cmss1	99	83.529	ENSPPAG00000038515	CMSS1	93	83.529	Pan_paniscus
ENSCGRG00000006722	Cmss1	99	83.658	ENSPPRG00000016767	CMSS1	92	83.658	Panthera_pardus
ENSCGRG00000006722	Cmss1	99	83.268	ENSPTIG00000018274	CMSS1	92	83.268	Panthera_tigris_altaica
ENSCGRG00000006722	Cmss1	99	82.745	ENSPTRG00000015157	CMSS1	100	83.673	Pan_troglodytes
ENSCGRG00000006722	Cmss1	99	80.078	ENSPANG00000019980	CMSS1	98	80.078	Papio_anubis
ENSCGRG00000006722	Cmss1	88	59.130	ENSPKIG00000012609	cmss1	88	57.983	Paramormyrops_kingsleyae
ENSCGRG00000006722	Cmss1	89	73.799	ENSPSIG00000003849	CMSS1	100	73.799	Pelodiscus_sinensis
ENSCGRG00000006722	Cmss1	91	55.508	ENSPMGG00000010286	cmss1	100	55.932	Periophthalmus_magnuspinnatus
ENSCGRG00000006722	Cmss1	100	91.051	ENSPEMG00000016384	Cmss1	92	91.051	Peromyscus_maniculatus_bairdii
ENSCGRG00000006722	Cmss1	79	51.961	ENSPMAG00000001146	cmss1	99	52.475	Petromyzon_marinus
ENSCGRG00000006722	Cmss1	99	70.543	ENSPCIG00000015656	CMSS1	98	70.543	Phascolarctos_cinereus
ENSCGRG00000006722	Cmss1	79	61.386	ENSPFOG00000016849	cmss1	71	61.386	Poecilia_formosa
ENSCGRG00000006722	Cmss1	79	60.891	ENSPLAG00000008323	cmss1	71	60.891	Poecilia_latipinna
ENSCGRG00000006722	Cmss1	79	61.386	ENSPMEG00000021020	cmss1	70	61.386	Poecilia_mexicana
ENSCGRG00000006722	Cmss1	79	60.891	ENSPREG00000007618	cmss1	69	60.891	Poecilia_reticulata
ENSCGRG00000006722	Cmss1	99	82.812	ENSPPYG00000013606	CMSS1	94	82.812	Pongo_abelii
ENSCGRG00000006722	Cmss1	98	84.462	ENSPCOG00000020035	CMSS1	97	84.462	Propithecus_coquereli
ENSCGRG00000006722	Cmss1	99	72.266	ENSPVAG00000017031	CMSS1	92	72.266	Pteropus_vampyrus
ENSCGRG00000006722	Cmss1	68	62.500	ENSPNYG00000013428	cmss1	65	62.500	Pundamilia_nyererei
ENSCGRG00000006722	Cmss1	88	53.478	ENSPNAG00000007912	cmss1	82	53.498	Pygocentrus_nattereri
ENSCGRG00000006722	Cmss1	99	87.549	ENSRNOG00000027888	Cmss1	99	87.549	Rattus_norvegicus
ENSCGRG00000006722	Cmss1	99	82.422	ENSRBIG00000037931	CMSS1	98	82.422	Rhinopithecus_bieti
ENSCGRG00000006722	Cmss1	99	82.422	ENSRROG00000042910	CMSS1	98	82.422	Rhinopithecus_roxellana
ENSCGRG00000006722	Cmss1	99	82.353	ENSSBOG00000030980	CMSS1	97	82.353	Saimiri_boliviensis_boliviensis
ENSCGRG00000006722	Cmss1	96	71.429	ENSSHAG00000009321	CMSS1	99	71.429	Sarcophilus_harrisii
ENSCGRG00000006722	Cmss1	88	61.304	ENSSFOG00015001509	cmss1	82	60.084	Scleropages_formosus
ENSCGRG00000006722	Cmss1	86	60.000	ENSSMAG00000001653	cmss1	77	60.000	Scophthalmus_maximus
ENSCGRG00000006722	Cmss1	88	59.825	ENSSDUG00000007719	cmss1	92	54.135	Seriola_dumerili
ENSCGRG00000006722	Cmss1	80	63.107	ENSSLDG00000012300	cmss1	76	59.016	Seriola_lalandi_dorsalis
ENSCGRG00000006722	Cmss1	100	68.482	ENSSARG00000003584	CMSS1	91	68.482	Sorex_araneus
ENSCGRG00000006722	Cmss1	88	69.027	ENSSPUG00000003865	CMSS1	100	69.027	Sphenodon_punctatus
ENSCGRG00000006722	Cmss1	80	62.621	ENSSPAG00000019182	cmss1	63	62.376	Stegastes_partitus
ENSCGRG00000006722	Cmss1	99	83.594	ENSSSCG00000011970	CMSS1	92	83.594	Sus_scrofa
ENSCGRG00000006722	Cmss1	89	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSCGRG00000006722	Cmss1	79	58.911	ENSTRUG00000015265	cmss1	72	58.911	Takifugu_rubripes
ENSCGRG00000006722	Cmss1	79	54.455	ENSTNIG00000002880	cmss1	73	54.455	Tetraodon_nigroviridis
ENSCGRG00000006722	Cmss1	89	61.404	ENSTBEG00000016722	CMSS1	81	61.404	Tupaia_belangeri
ENSCGRG00000006722	Cmss1	99	79.688	ENSTTRG00000001562	CMSS1	92	79.688	Tursiops_truncatus
ENSCGRG00000006722	Cmss1	99	83.137	ENSUAMG00000024209	CMSS1	100	86.099	Ursus_americanus
ENSCGRG00000006722	Cmss1	99	82.353	ENSUMAG00000001983	CMSS1	98	82.353	Ursus_maritimus
ENSCGRG00000006722	Cmss1	89	69.737	ENSVPAG00000000263	CMSS1	82	69.737	Vicugna_pacos
ENSCGRG00000006722	Cmss1	84	84.793	ENSVVUG00000007776	-	85	84.793	Vulpes_vulpes
ENSCGRG00000006722	Cmss1	96	84.146	ENSVVUG00000021647	-	100	84.146	Vulpes_vulpes
ENSCGRG00000006722	Cmss1	79	63.366	ENSXETG00000011858	cmss1	72	63.366	Xenopus_tropicalis
ENSCGRG00000006722	Cmss1	80	61.650	ENSXCOG00000018724	cmss1	69	61.386	Xiphophorus_couchianus
ENSCGRG00000006722	Cmss1	80	61.650	ENSXMAG00000011243	cmss1	76	61.386	Xiphophorus_maculatus