EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000007534 (Gene tree)
Gene ID: -
Gene Symbol: Rab5c
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 24954 bases
Position: chrJH000499.1:370289-395242
Accession: 100754413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000010291	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000010462	-	4434	XM_003504641	ENSCGRP00000010291	216 (aa)	XP_003504689	G3HLW5

Gene Model

Click here to download ENSCGRG00000007534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000007534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000007534	Rab5c	81	33.702	ENSCGRG00000010918	Hras	94	33.702
ENSCGRG00000007534	Rab5c	89	38.021	ENSCGRG00000012126	Rab13	95	38.021
ENSCGRG00000007534	Rab5c	78	33.728	ENSCGRG00000007401	-	75	33.728
ENSCGRG00000007534	Rab5c	75	31.902	ENSCGRG00000002586	Nras	85	31.902
ENSCGRG00000007534	Rab5c	89	43.590	ENSCGRG00000008456	-	95	43.590
ENSCGRG00000007534	Rab5c	77	32.335	ENSCGRG00000015400	-	90	31.579
ENSCGRG00000007534	Rab5c	90	42.512	ENSCGRG00000010967	Rab11b	94	42.512
ENSCGRG00000007534	Rab5c	73	34.375	ENSCGRG00000013186	Rab36	60	34.375
ENSCGRG00000007534	Rab5c	90	42.029	ENSCGRG00000018359	Rab11a	94	42.029
ENSCGRG00000007534	Rab5c	89	35.354	ENSCGRG00000002809	Rab9b	97	35.354
ENSCGRG00000007534	Rab5c	75	36.585	ENSCGRG00000013798	Rab39b	77	36.585
ENSCGRG00000007534	Rab5c	91	39.594	ENSCGRG00000017201	Rab18	94	39.594
ENSCGRG00000007534	Rab5c	73	30.061	ENSCGRG00000007127	Dnajc27	60	30.061
ENSCGRG00000007534	Rab5c	78	35.503	ENSCGRG00000010112	Rab15	85	35.503
ENSCGRG00000007534	Rab5c	55	31.967	ENSCGRG00000016383	Arl8b	62	31.967
ENSCGRG00000007534	Rab5c	75	40.361	ENSCGRG00000013497	Rab33a	70	40.361
ENSCGRG00000007534	Rab5c	89	34.826	ENSCGRG00000017790	Rab9	94	34.826
ENSCGRG00000007534	Rab5c	76	42.683	ENSCGRG00000005328	Rab14	76	42.683
ENSCGRG00000007534	Rab5c	80	35.838	ENSCGRG00000013630	Rab23	73	35.838
ENSCGRG00000007534	Rab5c	89	44.330	ENSCGRG00000015564	Rab1b	96	44.330
ENSCGRG00000007534	Rab5c	77	42.442	ENSCGRG00000011649	Rab7	83	42.442
ENSCGRG00000007534	Rab5c	90	42.500	ENSCGRG00000012173	Rab25	94	42.500
ENSCGRG00000007534	Rab5c	89	39.801	ENSCGRG00000010264	-	93	39.801
ENSCGRG00000007534	Rab5c	78	42.262	ENSCGRG00000014842	Rab30	83	42.262
ENSCGRG00000007534	Rab5c	97	86.603	ENSCGRG00000009508	-	97	86.603
ENSCGRG00000007534	Rab5c	100	87.037	ENSCGRG00000002786	-	100	87.037
ENSCGRG00000007534	Rab5c	78	33.136	ENSCGRG00000019639	Rasl2-9	77	33.136
ENSCGRG00000007534	Rab5c	93	38.350	ENSCGRG00000015464	Rab33b	89	38.350
ENSCGRG00000007534	Rab5c	73	31.875	ENSCGRG00000017588	Rab34	62	31.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000007534	Rab5c	100	99.074	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSCGRG00000007534	Rab5c	99	88.837	ENSAPOG00000016864	rab5c	98	90.698	Acanthochromis_polyacanthus
ENSCGRG00000007534	Rab5c	100	98.148	ENSAMEG00000006003	RAB5C	100	98.148	Ailuropoda_melanoleuca
ENSCGRG00000007534	Rab5c	99	88.426	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSCGRG00000007534	Rab5c	99	88.889	ENSAOCG00000016614	rab5c	98	90.741	Amphiprion_ocellaris
ENSCGRG00000007534	Rab5c	97	88.626	ENSAPEG00000017868	-	97	90.521	Amphiprion_percula
ENSCGRG00000007534	Rab5c	100	88.991	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSCGRG00000007534	Rab5c	94	98.529	ENSANAG00000025390	RAB5C	100	98.529	Aotus_nancymaae
ENSCGRG00000007534	Rab5c	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSCGRG00000007534	Rab5c	99	87.500	ENSACLG00000002706	rab5c	98	89.815	Astatotilapia_calliptera
ENSCGRG00000007534	Rab5c	99	89.401	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSCGRG00000007534	Rab5c	96	89.048	ENSAMXG00000037267	-	99	91.429	Astyanax_mexicanus
ENSCGRG00000007534	Rab5c	100	98.148	ENSBTAG00000006982	RAB5C	100	98.148	Bos_taurus
ENSCGRG00000007534	Rab5c	99	75.463	WBGene00004268	rab-5	99	75.463	Caenorhabditis_elegans
ENSCGRG00000007534	Rab5c	100	97.685	ENSCAFG00000015629	RAB5C	100	97.685	Canis_familiaris
ENSCGRG00000007534	Rab5c	100	97.685	ENSCAFG00020013537	RAB5C	100	97.685	Canis_lupus_dingo
ENSCGRG00000007534	Rab5c	100	98.148	ENSCHIG00000012960	RAB5C	100	98.148	Capra_hircus
ENSCGRG00000007534	Rab5c	100	98.611	ENSTSYG00000030531	RAB5C	100	98.611	Carlito_syrichta
ENSCGRG00000007534	Rab5c	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSCGRG00000007534	Rab5c	100	99.074	ENSCATG00000040873	RAB5C	100	99.074	Cercocebus_atys
ENSCGRG00000007534	Rab5c	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSCGRG00000007534	Rab5c	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSCGRG00000007534	Rab5c	99	75.701	ENSCING00000003340	-	99	75.701	Ciona_intestinalis
ENSCGRG00000007534	Rab5c	99	74.545	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSCGRG00000007534	Rab5c	100	100.000	ENSCGRG00001014226	Rab5c	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000007534	Rab5c	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSCGRG00000007534	Rab5c	99	88.889	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSCGRG00000007534	Rab5c	100	98.148	ENSDNOG00000038853	RAB5C	100	98.148	Dasypus_novemcinctus
ENSCGRG00000007534	Rab5c	100	97.685	ENSDORG00000006819	Rab5c	100	97.685	Dipodomys_ordii
ENSCGRG00000007534	Rab5c	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSCGRG00000007534	Rab5c	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSCGRG00000007534	Rab5c	100	98.148	ENSEASG00005009281	RAB5C	100	98.148	Equus_asinus_asinus
ENSCGRG00000007534	Rab5c	100	98.611	ENSECAG00000025054	RAB5C	100	98.611	Equus_caballus
ENSCGRG00000007534	Rab5c	100	98.148	ENSEEUG00000002790	RAB5C	100	98.148	Erinaceus_europaeus
ENSCGRG00000007534	Rab5c	99	87.500	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSCGRG00000007534	Rab5c	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSCGRG00000007534	Rab5c	100	98.148	ENSFCAG00000002148	RAB5C	100	98.148	Felis_catus
ENSCGRG00000007534	Rab5c	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSCGRG00000007534	Rab5c	99	88.889	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSCGRG00000007534	Rab5c	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSCGRG00000007534	Rab5c	99	87.500	ENSGMOG00000015096	rab5c	98	89.815	Gadus_morhua
ENSCGRG00000007534	Rab5c	80	87.209	ENSGMOG00000001876	-	99	87.209	Gadus_morhua
ENSCGRG00000007534	Rab5c	99	89.352	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSCGRG00000007534	Rab5c	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSCGRG00000007534	Rab5c	87	94.681	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSCGRG00000007534	Rab5c	100	99.074	ENSGGOG00000005472	RAB5C	100	99.074	Gorilla_gorilla
ENSCGRG00000007534	Rab5c	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSCGRG00000007534	Rab5c	99	87.500	ENSHBUG00000002014	rab5c	98	89.815	Haplochromis_burtoni
ENSCGRG00000007534	Rab5c	100	95.370	ENSHGLG00000012067	RAB5C	100	95.370	Heterocephalus_glaber_female
ENSCGRG00000007534	Rab5c	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSCGRG00000007534	Rab5c	99	89.401	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSCGRG00000007534	Rab5c	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSCGRG00000007534	Rab5c	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSCGRG00000007534	Rab5c	100	98.611	ENSJJAG00000021181	Rab5c	100	98.611	Jaculus_jaculus
ENSCGRG00000007534	Rab5c	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSCGRG00000007534	Rab5c	99	88.426	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSCGRG00000007534	Rab5c	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSCGRG00000007534	Rab5c	99	89.815	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSCGRG00000007534	Rab5c	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSCGRG00000007534	Rab5c	100	99.074	ENSMFAG00000039627	RAB5C	100	99.074	Macaca_fascicularis
ENSCGRG00000007534	Rab5c	100	99.074	ENSMNEG00000000355	RAB5C	100	99.074	Macaca_nemestrina
ENSCGRG00000007534	Rab5c	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSCGRG00000007534	Rab5c	99	87.963	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSCGRG00000007534	Rab5c	99	87.500	ENSMZEG00005022735	rab5c	98	89.815	Maylandia_zebra
ENSCGRG00000007534	Rab5c	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSCGRG00000007534	Rab5c	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSCGRG00000007534	Rab5c	100	98.148	ENSMICG00000041608	RAB5C	100	98.148	Microcebus_murinus
ENSCGRG00000007534	Rab5c	100	99.074	ENSMOCG00000018531	-	100	99.074	Microtus_ochrogaster
ENSCGRG00000007534	Rab5c	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSCGRG00000007534	Rab5c	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSCGRG00000007534	Rab5c	97	84.834	ENSMALG00000006052	rab5c	96	84.651	Monopterus_albus
ENSCGRG00000007534	Rab5c	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSCGRG00000007534	Rab5c	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSCGRG00000007534	Rab5c	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSCGRG00000007534	Rab5c	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSCGRG00000007534	Rab5c	100	98.148	ENSMPUG00000010554	RAB5C	100	98.148	Mustela_putorius_furo
ENSCGRG00000007534	Rab5c	100	97.222	ENSNGAG00000010286	Rab5c	100	97.222	Nannospalax_galili
ENSCGRG00000007534	Rab5c	99	88.426	ENSNBRG00000018165	rab5c	98	90.741	Neolamprologus_brichardi
ENSCGRG00000007534	Rab5c	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSCGRG00000007534	Rab5c	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSCGRG00000007534	Rab5c	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSCGRG00000007534	Rab5c	99	88.426	ENSONIG00000001113	rab5c	98	90.741	Oreochromis_niloticus
ENSCGRG00000007534	Rab5c	100	87.615	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSCGRG00000007534	Rab5c	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSCGRG00000007534	Rab5c	100	87.615	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSCGRG00000007534	Rab5c	100	87.615	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSCGRG00000007534	Rab5c	100	98.148	ENSOGAG00000009456	RAB5C	100	98.148	Otolemur_garnettii
ENSCGRG00000007534	Rab5c	100	98.148	ENSOARG00000018768	RAB5C	100	98.148	Ovis_aries
ENSCGRG00000007534	Rab5c	100	99.074	ENSPPAG00000037206	RAB5C	100	99.074	Pan_paniscus
ENSCGRG00000007534	Rab5c	100	98.148	ENSPPRG00000005745	RAB5C	100	98.148	Panthera_pardus
ENSCGRG00000007534	Rab5c	100	98.148	ENSPTIG00000008177	RAB5C	100	98.148	Panthera_tigris_altaica
ENSCGRG00000007534	Rab5c	100	99.074	ENSPTRG00000009194	RAB5C	100	99.074	Pan_troglodytes
ENSCGRG00000007534	Rab5c	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSCGRG00000007534	Rab5c	99	89.767	ENSPKIG00000001237	-	99	89.767	Paramormyrops_kingsleyae
ENSCGRG00000007534	Rab5c	99	86.111	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSCGRG00000007534	Rab5c	100	99.074	ENSPEMG00000017971	Rab5c	100	99.074	Peromyscus_maniculatus_bairdii
ENSCGRG00000007534	Rab5c	99	78.972	ENSPMAG00000007867	rab5c	99	78.972	Petromyzon_marinus
ENSCGRG00000007534	Rab5c	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSCGRG00000007534	Rab5c	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSCGRG00000007534	Rab5c	100	96.759	ENSPCIG00000020225	-	100	96.759	Phascolarctos_cinereus
ENSCGRG00000007534	Rab5c	99	89.352	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSCGRG00000007534	Rab5c	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSCGRG00000007534	Rab5c	99	89.352	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSCGRG00000007534	Rab5c	98	88.263	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSCGRG00000007534	Rab5c	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSCGRG00000007534	Rab5c	99	89.352	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSCGRG00000007534	Rab5c	100	99.074	ENSPPYG00000008398	RAB5C	100	99.074	Pongo_abelii
ENSCGRG00000007534	Rab5c	100	97.222	ENSPCAG00000016412	RAB5C	100	97.222	Procavia_capensis
ENSCGRG00000007534	Rab5c	100	97.222	ENSPCOG00000026327	RAB5C	100	97.222	Propithecus_coquereli
ENSCGRG00000007534	Rab5c	100	98.611	ENSPVAG00000003867	RAB5C	100	98.611	Pteropus_vampyrus
ENSCGRG00000007534	Rab5c	99	87.500	ENSPNYG00000010615	rab5c	98	89.815	Pundamilia_nyererei
ENSCGRG00000007534	Rab5c	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSCGRG00000007534	Rab5c	97	87.264	ENSPNAG00000002218	-	99	89.623	Pygocentrus_nattereri
ENSCGRG00000007534	Rab5c	99	91.705	ENSPNAG00000028138	rab5c	98	91.705	Pygocentrus_nattereri
ENSCGRG00000007534	Rab5c	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSCGRG00000007534	Rab5c	100	99.074	ENSRBIG00000031376	RAB5C	100	99.074	Rhinopithecus_bieti
ENSCGRG00000007534	Rab5c	100	99.074	ENSRROG00000032895	RAB5C	100	99.074	Rhinopithecus_roxellana
ENSCGRG00000007534	Rab5c	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSCGRG00000007534	Rab5c	100	97.222	ENSSHAG00000005267	-	100	97.222	Sarcophilus_harrisii
ENSCGRG00000007534	Rab5c	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSCGRG00000007534	Rab5c	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSCGRG00000007534	Rab5c	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSCGRG00000007534	Rab5c	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSCGRG00000007534	Rab5c	100	95.370	ENSSPUG00000012950	-	100	95.370	Sphenodon_punctatus
ENSCGRG00000007534	Rab5c	99	89.352	ENSSPAG00000006436	rab5c	98	91.667	Stegastes_partitus
ENSCGRG00000007534	Rab5c	100	98.148	ENSSSCG00000032467	RAB5C	100	98.148	Sus_scrofa
ENSCGRG00000007534	Rab5c	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSCGRG00000007534	Rab5c	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSCGRG00000007534	Rab5c	100	98.611	ENSTBEG00000007092	RAB5C	100	98.611	Tupaia_belangeri
ENSCGRG00000007534	Rab5c	100	97.685	ENSTTRG00000006673	RAB5C	100	97.685	Tursiops_truncatus
ENSCGRG00000007534	Rab5c	100	98.148	ENSUAMG00000024343	RAB5C	100	98.148	Ursus_americanus
ENSCGRG00000007534	Rab5c	100	98.148	ENSUMAG00000023270	RAB5C	100	98.148	Ursus_maritimus
ENSCGRG00000007534	Rab5c	96	91.429	ENSXCOG00000006300	-	99	88.235	Xiphophorus_couchianus
ENSCGRG00000007534	Rab5c	99	88.889	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSCGRG00000007534	Rab5c	99	89.352	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus
ENSCGRG00000007534	Rab5c	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus