EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000007781 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp48
Alias: 1110050F08Rik|6530403A03Rik
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 21630 bases
Position: chrJH000292.1:796000-817629
Accession: 100766215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000010604	zf-U11-48K	PF05253.12	1.7e-08	1	1
ENSCGRP00000010603	zf-U11-48K	PF05253.12	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000010777	-	837	-	ENSCGRP00000010604	278 (aa)	-	-
ENSCGRT00000010776	-	2987	XM_003502004	ENSCGRP00000010603	337 (aa)	XP_003502052	UPI00022F490B

Gene Model

Click here to download ENSCGRG00000007781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000007781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000007781	Snrnp48	100	87.611	ENSG00000168566	SNRNP48	100	88.496	Homo_sapiens
ENSCGRG00000007781	Snrnp48	82	47.183	ENSAPOG00000021430	snrnp48	96	43.149	Acanthochromis_polyacanthus
ENSCGRG00000007781	Snrnp48	99	84.726	ENSAMEG00000017349	SNRNP48	100	85.014	Ailuropoda_melanoleuca
ENSCGRG00000007781	Snrnp48	89	44.444	ENSACIG00000002032	snrnp48	96	41.964	Amphilophus_citrinellus
ENSCGRG00000007781	Snrnp48	82	47.183	ENSAOCG00000010562	snrnp48	96	43.516	Amphiprion_ocellaris
ENSCGRG00000007781	Snrnp48	82	47.163	ENSAPEG00000003231	snrnp48	96	43.478	Amphiprion_percula
ENSCGRG00000007781	Snrnp48	77	48.529	ENSATEG00000020210	snrnp48	81	48.214	Anabas_testudineus
ENSCGRG00000007781	Snrnp48	82	64.931	ENSACAG00000002811	SNRNP48	89	64.931	Anolis_carolinensis
ENSCGRG00000007781	Snrnp48	100	87.021	ENSANAG00000033538	SNRNP48	100	87.906	Aotus_nancymaae
ENSCGRG00000007781	Snrnp48	93	45.652	ENSAMXG00000015309	snrnp48	97	44.118	Astyanax_mexicanus
ENSCGRG00000007781	Snrnp48	100	82.353	ENSBTAG00000001123	SNRNP48	100	83.529	Bos_taurus
ENSCGRG00000007781	Snrnp48	100	87.611	ENSCJAG00000021330	SNRNP48	100	88.496	Callithrix_jacchus
ENSCGRG00000007781	Snrnp48	99	87.798	ENSCAFG00000009574	SNRNP48	83	87.834	Canis_familiaris
ENSCGRG00000007781	Snrnp48	99	87.834	ENSCAFG00020013203	SNRNP48	99	88.131	Canis_lupus_dingo
ENSCGRG00000007781	Snrnp48	100	83.824	ENSCHIG00000015216	SNRNP48	100	85.000	Capra_hircus
ENSCGRG00000007781	Snrnp48	100	87.021	ENSTSYG00000000698	SNRNP48	100	87.906	Carlito_syrichta
ENSCGRG00000007781	Snrnp48	91	82.085	ENSCAPG00000006768	SNRNP48	100	82.085	Cavia_aperea
ENSCGRG00000007781	Snrnp48	100	85.546	ENSCPOG00000007910	SNRNP48	100	85.546	Cavia_porcellus
ENSCGRG00000007781	Snrnp48	100	86.136	ENSCCAG00000035652	SNRNP48	100	87.021	Cebus_capucinus
ENSCGRG00000007781	Snrnp48	100	87.021	ENSCATG00000033947	SNRNP48	100	87.906	Cercocebus_atys
ENSCGRG00000007781	Snrnp48	100	86.136	ENSCLAG00000003765	SNRNP48	100	87.021	Chinchilla_lanigera
ENSCGRG00000007781	Snrnp48	100	87.611	ENSCSAG00000007409	SNRNP48	100	88.496	Chlorocebus_sabaeus
ENSCGRG00000007781	Snrnp48	84	64.452	ENSCPBG00000019146	SNRNP48	91	64.452	Chrysemys_picta_bellii
ENSCGRG00000007781	Snrnp48	100	87.611	ENSCANG00000030017	SNRNP48	100	88.496	Colobus_angolensis_palliatus
ENSCGRG00000007781	Snrnp48	99	77.778	ENSCGRG00001008805	-	95	76.577	Cricetulus_griseus_chok1gshd
ENSCGRG00000007781	Snrnp48	100	100.000	ENSCGRG00001001076	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000007781	Snrnp48	77	47.529	ENSCSEG00000000722	snrnp48	72	47.529	Cynoglossus_semilaevis
ENSCGRG00000007781	Snrnp48	95	43.976	ENSCVAG00000019829	snrnp48	67	48.302	Cyprinodon_variegatus
ENSCGRG00000007781	Snrnp48	82	45.035	ENSDARG00000039989	snrnp48	96	42.643	Danio_rerio
ENSCGRG00000007781	Snrnp48	99	86.269	ENSDNOG00000014978	SNRNP48	99	86.866	Dasypus_novemcinctus
ENSCGRG00000007781	Snrnp48	99	85.841	ENSDORG00000015140	Snrnp48	100	85.000	Dipodomys_ordii
ENSCGRG00000007781	Snrnp48	68	34.010	ENSEBUG00000016376	-	89	33.182	Eptatretus_burgeri
ENSCGRG00000007781	Snrnp48	99	87.870	ENSEASG00005012021	SNRNP48	99	88.166	Equus_asinus_asinus
ENSCGRG00000007781	Snrnp48	100	88.496	ENSECAG00000026937	SNRNP48	100	88.791	Equus_caballus
ENSCGRG00000007781	Snrnp48	100	66.962	ENSEEUG00000015437	SNRNP48	99	66.962	Erinaceus_europaeus
ENSCGRG00000007781	Snrnp48	88	47.231	ENSELUG00000009766	snrnp48	78	48.421	Esox_lucius
ENSCGRG00000007781	Snrnp48	100	87.611	ENSFCAG00000018853	SNRNP48	100	87.906	Felis_catus
ENSCGRG00000007781	Snrnp48	83	63.699	ENSFALG00000007797	SNRNP48	93	64.384	Ficedula_albicollis
ENSCGRG00000007781	Snrnp48	99	84.320	ENSFDAG00000009231	SNRNP48	100	85.841	Fukomys_damarensis
ENSCGRG00000007781	Snrnp48	59	55.665	ENSFHEG00000014647	snrnp48	97	46.465	Fundulus_heteroclitus
ENSCGRG00000007781	Snrnp48	73	46.774	ENSGMOG00000018599	-	81	46.816	Gadus_morhua
ENSCGRG00000007781	Snrnp48	78	65.568	ENSGALG00000013005	SNRNP48	92	65.568	Gallus_gallus
ENSCGRG00000007781	Snrnp48	95	42.319	ENSGAFG00000021639	snrnp48	94	43.787	Gambusia_affinis
ENSCGRG00000007781	Snrnp48	74	49.004	ENSGACG00000017756	-	96	45.289	Gasterosteus_aculeatus
ENSCGRG00000007781	Snrnp48	84	63.667	ENSGAGG00000000865	SNRNP48	97	63.667	Gopherus_agassizii
ENSCGRG00000007781	Snrnp48	100	87.611	ENSGGOG00000013220	SNRNP48	100	88.496	Gorilla_gorilla
ENSCGRG00000007781	Snrnp48	75	47.266	ENSHBUG00000017066	snrnp48	95	41.813	Haplochromis_burtoni
ENSCGRG00000007781	Snrnp48	99	85.799	ENSHGLG00000015241	SNRNP48	100	86.431	Heterocephalus_glaber_female
ENSCGRG00000007781	Snrnp48	99	85.799	ENSHGLG00100010027	SNRNP48	100	86.431	Heterocephalus_glaber_male
ENSCGRG00000007781	Snrnp48	72	47.561	ENSHCOG00000014066	snrnp48	92	41.983	Hippocampus_comes
ENSCGRG00000007781	Snrnp48	100	90.855	ENSSTOG00000014635	SNRNP48	100	92.000	Ictidomys_tridecemlineatus
ENSCGRG00000007781	Snrnp48	100	85.841	ENSJJAG00000011495	Snrnp48	100	86.136	Jaculus_jaculus
ENSCGRG00000007781	Snrnp48	91	44.156	ENSKMAG00000016514	snrnp48	94	42.353	Kryptolebias_marmoratus
ENSCGRG00000007781	Snrnp48	77	46.743	ENSLBEG00000026249	snrnp48	95	42.857	Labrus_bergylta
ENSCGRG00000007781	Snrnp48	98	53.134	ENSLACG00000003958	SNRNP48	99	52.035	Latimeria_chalumnae
ENSCGRG00000007781	Snrnp48	84	51.903	ENSLOCG00000004187	snrnp48	95	49.258	Lepisosteus_oculatus
ENSCGRG00000007781	Snrnp48	100	83.481	ENSLAFG00000011152	SNRNP48	100	84.366	Loxodonta_africana
ENSCGRG00000007781	Snrnp48	100	87.906	ENSMFAG00000045216	SNRNP48	100	88.791	Macaca_fascicularis
ENSCGRG00000007781	Snrnp48	100	87.906	ENSMMUG00000014785	SNRNP48	100	88.791	Macaca_mulatta
ENSCGRG00000007781	Snrnp48	100	87.611	ENSMNEG00000042269	SNRNP48	100	88.496	Macaca_nemestrina
ENSCGRG00000007781	Snrnp48	100	87.906	ENSMLEG00000034004	SNRNP48	100	88.791	Mandrillus_leucophaeus
ENSCGRG00000007781	Snrnp48	77	48.289	ENSMAMG00000018673	snrnp48	83	43.642	Mastacembelus_armatus
ENSCGRG00000007781	Snrnp48	82	64.286	ENSMGAG00000006037	SNRNP48	99	65.068	Meleagris_gallopavo
ENSCGRG00000007781	Snrnp48	100	97.033	ENSMAUG00000011944	Snrnp48	100	97.033	Mesocricetus_auratus
ENSCGRG00000007781	Snrnp48	100	87.021	ENSMICG00000012497	SNRNP48	100	87.906	Microcebus_murinus
ENSCGRG00000007781	Snrnp48	100	95.846	ENSMOCG00000015555	Snrnp48	100	95.846	Microtus_ochrogaster
ENSCGRG00000007781	Snrnp48	54	52.973	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSCGRG00000007781	Snrnp48	99	69.565	ENSMODG00000009996	SNRNP48	93	69.855	Monodelphis_domestica
ENSCGRG00000007781	Snrnp48	75	49.606	ENSMALG00000005725	snrnp48	95	42.308	Monopterus_albus
ENSCGRG00000007781	Snrnp48	100	94.065	MGP_CAROLIEiJ_G0018441	Snrnp48	100	94.065	Mus_caroli
ENSCGRG00000007781	Snrnp48	100	93.769	ENSMUSG00000021431	Snrnp48	100	93.769	Mus_musculus
ENSCGRG00000007781	Snrnp48	100	94.659	MGP_PahariEiJ_G0019509	Snrnp48	100	94.659	Mus_pahari
ENSCGRG00000007781	Snrnp48	100	93.472	MGP_SPRETEiJ_G0019321	Snrnp48	100	93.472	Mus_spretus
ENSCGRG00000007781	Snrnp48	99	91.124	ENSNGAG00000004849	Snrnp48	99	91.124	Nannospalax_galili
ENSCGRG00000007781	Snrnp48	75	46.875	ENSNBRG00000012127	snrnp48	95	41.520	Neolamprologus_brichardi
ENSCGRG00000007781	Snrnp48	100	87.906	ENSNLEG00000011667	SNRNP48	100	88.791	Nomascus_leucogenys
ENSCGRG00000007781	Snrnp48	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.019	Ochotona_princeps
ENSCGRG00000007781	Snrnp48	96	43.769	ENSONIG00000001520	snrnp48	95	41.026	Oreochromis_niloticus
ENSCGRG00000007781	Snrnp48	63	59.162	ENSOANG00000019888	-	100	62.981	Ornithorhynchus_anatinus
ENSCGRG00000007781	Snrnp48	85	87.762	ENSOCUG00000005168	SNRNP48	100	87.500	Oryctolagus_cuniculus
ENSCGRG00000007781	Snrnp48	97	44.543	ENSORLG00000015654	snrnp48	96	44.575	Oryzias_latipes
ENSCGRG00000007781	Snrnp48	89	46.429	ENSORLG00020015976	snrnp48	82	44.282	Oryzias_latipes_hni
ENSCGRG00000007781	Snrnp48	97	44.838	ENSORLG00015022379	snrnp48	82	45.161	Oryzias_latipes_hsok
ENSCGRG00000007781	Snrnp48	96	44.109	ENSOMEG00000022007	snrnp48	95	44.058	Oryzias_melastigma
ENSCGRG00000007781	Snrnp48	91	87.255	ENSOGAG00000005275	SNRNP48	96	87.066	Otolemur_garnettii
ENSCGRG00000007781	Snrnp48	85	85.017	ENSOARG00000017319	SNRNP48	100	85.017	Ovis_aries
ENSCGRG00000007781	Snrnp48	100	87.906	ENSPPAG00000032873	SNRNP48	100	88.791	Pan_paniscus
ENSCGRG00000007781	Snrnp48	100	87.906	ENSPPRG00000004283	SNRNP48	100	88.201	Panthera_pardus
ENSCGRG00000007781	Snrnp48	85	88.502	ENSPTIG00000013502	SNRNP48	100	88.850	Panthera_tigris_altaica
ENSCGRG00000007781	Snrnp48	100	87.906	ENSPTRG00000017703	SNRNP48	100	88.791	Pan_troglodytes
ENSCGRG00000007781	Snrnp48	100	87.906	ENSPANG00000000771	SNRNP48	100	88.791	Papio_anubis
ENSCGRG00000007781	Snrnp48	94	45.481	ENSPKIG00000013703	snrnp48	59	49.474	Paramormyrops_kingsleyae
ENSCGRG00000007781	Snrnp48	84	63.455	ENSPSIG00000002213	SNRNP48	94	63.545	Pelodiscus_sinensis
ENSCGRG00000007781	Snrnp48	75	48.649	ENSPMGG00000008120	snrnp48	90	48.649	Periophthalmus_magnuspinnatus
ENSCGRG00000007781	Snrnp48	100	97.329	ENSPEMG00000008872	Snrnp48	100	98.947	Peromyscus_maniculatus_bairdii
ENSCGRG00000007781	Snrnp48	75	50.000	ENSPFOG00000003578	snrnp48	93	44.543	Poecilia_formosa
ENSCGRG00000007781	Snrnp48	95	32.509	ENSPLAG00000002290	snrnp48	79	49.573	Poecilia_latipinna
ENSCGRG00000007781	Snrnp48	75	49.609	ENSPMEG00000018033	snrnp48	93	44.248	Poecilia_mexicana
ENSCGRG00000007781	Snrnp48	74	50.199	ENSPREG00000018541	snrnp48	93	45.266	Poecilia_reticulata
ENSCGRG00000007781	Snrnp48	100	86.726	ENSPPYG00000016209	SNRNP48	100	87.611	Pongo_abelii
ENSCGRG00000007781	Snrnp48	79	68.539	ENSPCAG00000011991	SNRNP48	99	68.539	Procavia_capensis
ENSCGRG00000007781	Snrnp48	100	86.136	ENSPVAG00000002854	SNRNP48	100	86.431	Pteropus_vampyrus
ENSCGRG00000007781	Snrnp48	75	47.266	ENSPNYG00000015399	snrnp48	90	45.329	Pundamilia_nyererei
ENSCGRG00000007781	Snrnp48	100	94.065	ENSRNOG00000013756	Snrnp48	100	94.065	Rattus_norvegicus
ENSCGRG00000007781	Snrnp48	92	88.065	ENSRBIG00000043856	SNRNP48	98	88.065	Rhinopithecus_bieti
ENSCGRG00000007781	Snrnp48	100	87.611	ENSRROG00000043229	SNRNP48	100	88.496	Rhinopithecus_roxellana
ENSCGRG00000007781	Snrnp48	100	87.611	ENSSBOG00000019486	SNRNP48	100	88.496	Saimiri_boliviensis_boliviensis
ENSCGRG00000007781	Snrnp48	99	71.060	ENSSHAG00000014483	SNRNP48	100	71.060	Sarcophilus_harrisii
ENSCGRG00000007781	Snrnp48	74	50.781	ENSSFOG00015006610	snrnp48	70	48.161	Scleropages_formosus
ENSCGRG00000007781	Snrnp48	85	46.341	ENSSDUG00000014953	snrnp48	92	43.072	Seriola_dumerili
ENSCGRG00000007781	Snrnp48	85	46.416	ENSSLDG00000005989	snrnp48	92	43.675	Seriola_lalandi_dorsalis
ENSCGRG00000007781	Snrnp48	86	63.487	ENSSPUG00000006257	SNRNP48	86	65.132	Sphenodon_punctatus
ENSCGRG00000007781	Snrnp48	96	42.342	ENSSPAG00000006454	snrnp48	93	43.491	Stegastes_partitus
ENSCGRG00000007781	Snrnp48	83	63.230	ENSTGUG00000007575	SNRNP48	93	63.230	Taeniopygia_guttata
ENSCGRG00000007781	Snrnp48	74	49.402	ENSTRUG00000007031	snrnp48	92	45.482	Takifugu_rubripes
ENSCGRG00000007781	Snrnp48	75	45.490	ENSTNIG00000012977	-	76	45.312	Tetraodon_nigroviridis
ENSCGRG00000007781	Snrnp48	100	72.485	ENSTBEG00000015620	SNRNP48	100	72.485	Tupaia_belangeri
ENSCGRG00000007781	Snrnp48	100	86.136	ENSTTRG00000016715	SNRNP48	100	86.136	Tursiops_truncatus
ENSCGRG00000007781	Snrnp48	100	87.611	ENSUAMG00000003690	SNRNP48	100	87.611	Ursus_americanus
ENSCGRG00000007781	Snrnp48	85	84.321	ENSVPAG00000003557	SNRNP48	100	84.321	Vicugna_pacos
ENSCGRG00000007781	Snrnp48	99	87.834	ENSVVUG00000004996	SNRNP48	99	88.131	Vulpes_vulpes
ENSCGRG00000007781	Snrnp48	86	52.349	ENSXETG00000020447	snrnp48	97	50.595	Xenopus_tropicalis
ENSCGRG00000007781	Snrnp48	69	49.787	ENSXCOG00000004478	snrnp48	71	49.787	Xiphophorus_couchianus
ENSCGRG00000007781	Snrnp48	84	48.592	ENSXMAG00000013595	snrnp48	93	45.428	Xiphophorus_maculatus