EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000007878 (Gene tree)
Gene ID: -
Gene Symbol: Chd3
Alias: 2600010P09Rik|Chd7|Mi-2 alpha|Prp7|Prp9-1
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 20517 bases
Position: chrJH000064.1:1407375-1427891
Accession: 100755630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000010786	ResIII	PF04851.15	1.7e-08	1	1
ENSCGRP00000010785	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000010959	-	5403	XM_016964634	ENSCGRP00000010785	1800 (aa)	XP_016820123	-
ENSCGRT00000010960	-	5301	-	ENSCGRP00000010786	1766 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000007878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000007878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000007878	Chd3	88	78.947	ENSCGRG00000015920	Chd4	96	62.406
ENSCGRG00000007878	Chd3	93	72.500	ENSCGRG00000011341	Chd5	94	67.199

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000007878	Chd3	99	97.794	ENSG00000170004	CHD3	93	97.794	Homo_sapiens
ENSCGRG00000007878	Chd3	78	75.940	ENSAPOG00000005614	chd3	83	77.600	Acanthochromis_polyacanthus
ENSCGRG00000007878	Chd3	72	89.003	ENSAMEG00000003025	-	100	89.370	Ailuropoda_melanoleuca
ENSCGRG00000007878	Chd3	78	77.419	ENSACIG00000019671	chd3	89	78.074	Amphilophus_citrinellus
ENSCGRG00000007878	Chd3	93	76.858	ENSAOCG00000023784	chd3	92	73.963	Amphiprion_ocellaris
ENSCGRG00000007878	Chd3	93	76.782	ENSAPEG00000006341	chd3	92	69.300	Amphiprion_percula
ENSCGRG00000007878	Chd3	89	78.435	ENSATEG00000000848	chd3	89	70.675	Anabas_testudineus
ENSCGRG00000007878	Chd3	97	79.503	ENSACAG00000004276	CHD3	95	79.619	Anolis_carolinensis
ENSCGRG00000007878	Chd3	99	88.309	ENSANAG00000034323	CHD3	93	97.619	Aotus_nancymaae
ENSCGRG00000007878	Chd3	98	70.546	ENSACLG00000009222	chd3	99	70.769	Astatotilapia_calliptera
ENSCGRG00000007878	Chd3	99	97.794	ENSBTAG00000014377	CHD3	91	97.638	Bos_taurus
ENSCGRG00000007878	Chd3	99	97.794	ENSCJAG00000014766	CHD3	93	97.794	Callithrix_jacchus
ENSCGRG00000007878	Chd3	99	98.529	ENSCAFG00000016859	CHD3	93	98.529	Canis_familiaris
ENSCGRG00000007878	Chd3	94	91.304	ENSCAFG00020007422	CHD3	94	91.304	Canis_lupus_dingo
ENSCGRG00000007878	Chd3	99	97.059	ENSCHIG00000016737	CHD3	94	97.059	Capra_hircus
ENSCGRG00000007878	Chd3	99	96.324	ENSTSYG00000035658	CHD3	93	96.324	Carlito_syrichta
ENSCGRG00000007878	Chd3	99	97.059	ENSCAPG00000014864	CHD3	92	97.059	Cavia_aperea
ENSCGRG00000007878	Chd3	99	97.059	ENSCPOG00000022653	CHD3	93	97.059	Cavia_porcellus
ENSCGRG00000007878	Chd3	99	97.794	ENSCCAG00000034792	CHD3	93	97.794	Cebus_capucinus
ENSCGRG00000007878	Chd3	99	97.794	ENSCATG00000041717	CHD3	93	97.794	Cercocebus_atys
ENSCGRG00000007878	Chd3	99	98.529	ENSCLAG00000010523	CHD3	94	98.529	Chinchilla_lanigera
ENSCGRG00000007878	Chd3	99	97.794	ENSCSAG00000011122	CHD3	94	97.794	Chlorocebus_sabaeus
ENSCGRG00000007878	Chd3	88	80.899	ENSCPBG00000011966	CHD3	95	88.427	Chrysemys_picta_bellii
ENSCGRG00000007878	Chd3	99	97.794	ENSCANG00000037641	CHD3	93	97.794	Colobus_angolensis_palliatus
ENSCGRG00000007878	Chd3	99	100.000	ENSCGRG00001011306	Chd3	94	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000007878	Chd3	85	77.070	ENSCSEG00000004489	chd3	99	74.846	Cynoglossus_semilaevis
ENSCGRG00000007878	Chd3	90	80.681	ENSCVAG00000007293	chd3	89	75.991	Cyprinodon_variegatus
ENSCGRG00000007878	Chd3	93	73.171	ENSDARG00000021405	chd3	98	71.875	Danio_rerio
ENSCGRG00000007878	Chd3	99	98.529	ENSDNOG00000047846	CHD3	93	98.529	Dasypus_novemcinctus
ENSCGRG00000007878	Chd3	99	97.059	ENSDORG00000010713	Chd3	94	97.059	Dipodomys_ordii
ENSCGRG00000007878	Chd3	97	84.753	ENSETEG00000017733	CHD3	94	85.110	Echinops_telfairi
ENSCGRG00000007878	Chd3	73	73.066	ENSEBUG00000008310	chd3	99	63.578	Eptatretus_burgeri
ENSCGRG00000007878	Chd3	92	90.052	ENSEASG00005019360	CHD3	94	90.460	Equus_asinus_asinus
ENSCGRG00000007878	Chd3	92	90.111	ENSECAG00000010051	CHD3	94	90.518	Equus_caballus
ENSCGRG00000007878	Chd3	93	94.915	ENSEEUG00000015205	CHD3	87	94.915	Erinaceus_europaeus
ENSCGRG00000007878	Chd3	75	89.157	ENSELUG00000019499	chd3	88	89.157	Esox_lucius
ENSCGRG00000007878	Chd3	99	97.794	ENSFCAG00000009629	CHD3	90	97.794	Felis_catus
ENSCGRG00000007878	Chd3	99	90.169	ENSFDAG00000008220	CHD3	93	90.518	Fukomys_damarensis
ENSCGRG00000007878	Chd3	88	75.025	ENSGMOG00000013599	chd3	87	75.887	Gadus_morhua
ENSCGRG00000007878	Chd3	59	78.415	ENSGAFG00000004055	chd3	90	79.439	Gambusia_affinis
ENSCGRG00000007878	Chd3	97	68.135	ENSGACG00000019275	chd3	100	68.343	Gasterosteus_aculeatus
ENSCGRG00000007878	Chd3	81	82.665	ENSGAGG00000013164	CHD3	98	83.209	Gopherus_agassizii
ENSCGRG00000007878	Chd3	99	97.794	ENSGGOG00000013496	CHD3	93	97.794	Gorilla_gorilla
ENSCGRG00000007878	Chd3	99	98.529	ENSHGLG00000012017	CHD3	93	98.529	Heterocephalus_glaber_female
ENSCGRG00000007878	Chd3	87	98.473	ENSHGLG00100013902	CHD3	94	98.473	Heterocephalus_glaber_male
ENSCGRG00000007878	Chd3	93	68.147	ENSHCOG00000010170	chd3	91	68.409	Hippocampus_comes
ENSCGRG00000007878	Chd3	89	69.511	ENSIPUG00000003271	chd3	88	76.471	Ictalurus_punctatus
ENSCGRG00000007878	Chd3	99	98.529	ENSSTOG00000025907	CHD3	94	98.529	Ictidomys_tridecemlineatus
ENSCGRG00000007878	Chd3	99	96.324	ENSJJAG00000017633	Chd3	94	96.324	Jaculus_jaculus
ENSCGRG00000007878	Chd3	94	69.519	ENSKMAG00000019292	chd3	97	70.261	Kryptolebias_marmoratus
ENSCGRG00000007878	Chd3	83	77.621	ENSLBEG00000028485	chd3	90	73.713	Labrus_bergylta
ENSCGRG00000007878	Chd3	95	71.594	ENSLACG00000008031	CHD3	92	71.560	Latimeria_chalumnae
ENSCGRG00000007878	Chd3	97	71.864	ENSLOCG00000013965	chd3	97	72.144	Lepisosteus_oculatus
ENSCGRG00000007878	Chd3	90	98.529	ENSLAFG00000000572	CHD3	90	98.529	Loxodonta_africana
ENSCGRG00000007878	Chd3	99	97.794	ENSMFAG00000020113	CHD3	93	97.794	Macaca_fascicularis
ENSCGRG00000007878	Chd3	99	97.794	ENSMMUG00000022221	CHD3	93	97.794	Macaca_mulatta
ENSCGRG00000007878	Chd3	99	97.794	ENSMNEG00000001728	CHD3	93	97.794	Macaca_nemestrina
ENSCGRG00000007878	Chd3	99	97.794	ENSMLEG00000032249	CHD3	93	97.794	Mandrillus_leucophaeus
ENSCGRG00000007878	Chd3	82	73.413	ENSMAMG00000000564	chd3	89	73.453	Mastacembelus_armatus
ENSCGRG00000007878	Chd3	99	99.265	ENSMAUG00000013873	Chd3	91	99.265	Mesocricetus_auratus
ENSCGRG00000007878	Chd3	99	97.794	ENSMICG00000008741	CHD3	93	97.794	Microcebus_murinus
ENSCGRG00000007878	Chd3	99	100.000	ENSMOCG00000004848	Chd3	94	100.000	Microtus_ochrogaster
ENSCGRG00000007878	Chd3	95	66.992	ENSMMOG00000012699	chd3	95	71.043	Mola_mola
ENSCGRG00000007878	Chd3	91	87.367	ENSMODG00000007509	CHD3	94	87.663	Monodelphis_domestica
ENSCGRG00000007878	Chd3	99	98.529	MGP_CAROLIEiJ_G0016564	Chd3	94	98.438	Mus_caroli
ENSCGRG00000007878	Chd3	99	98.529	ENSMUSG00000018474	Chd3	94	98.438	Mus_musculus
ENSCGRG00000007878	Chd3	99	98.529	MGP_PahariEiJ_G0017695	Chd3	99	91.616	Mus_pahari
ENSCGRG00000007878	Chd3	99	98.529	MGP_SPRETEiJ_G0017400	Chd3	94	98.438	Mus_spretus
ENSCGRG00000007878	Chd3	91	89.907	ENSMPUG00000008861	CHD3	100	90.257	Mustela_putorius_furo
ENSCGRG00000007878	Chd3	99	89.657	ENSMLUG00000014643	-	93	90.006	Myotis_lucifugus
ENSCGRG00000007878	Chd3	99	97.794	ENSNGAG00000000773	Chd3	92	97.794	Nannospalax_galili
ENSCGRG00000007878	Chd3	79	75.261	ENSNBRG00000000636	chd3	87	73.776	Neolamprologus_brichardi
ENSCGRG00000007878	Chd3	98	97.794	ENSNLEG00000009770	CHD3	94	97.794	Nomascus_leucogenys
ENSCGRG00000007878	Chd3	86	97.980	ENSMEUG00000005852	CHD3	82	97.980	Notamacropus_eugenii
ENSCGRG00000007878	Chd3	94	97.619	ENSOPRG00000011069	CHD3	94	97.619	Ochotona_princeps
ENSCGRG00000007878	Chd3	99	97.794	ENSODEG00000017785	CHD3	93	97.794	Octodon_degus
ENSCGRG00000007878	Chd3	99	98.413	ENSOCUG00000029299	CHD3	95	98.413	Oryctolagus_cuniculus
ENSCGRG00000007878	Chd3	82	69.782	ENSORLG00000007107	chd3	93	66.118	Oryzias_latipes
ENSCGRG00000007878	Chd3	53	82.118	ENSORLG00020008387	chd3	95	71.481	Oryzias_latipes_hni
ENSCGRG00000007878	Chd3	67	79.853	ENSOMEG00000013691	chd3	89	74.933	Oryzias_melastigma
ENSCGRG00000007878	Chd3	99	97.059	ENSOGAG00000003216	CHD3	94	97.059	Otolemur_garnettii
ENSCGRG00000007878	Chd3	99	97.059	ENSOARG00000017855	CHD3	98	85.626	Ovis_aries
ENSCGRG00000007878	Chd3	99	97.794	ENSPPAG00000032886	CHD3	93	97.794	Pan_paniscus
ENSCGRG00000007878	Chd3	99	97.059	ENSPPRG00000000626	CHD3	93	97.059	Panthera_pardus
ENSCGRG00000007878	Chd3	99	97.794	ENSPTRG00000008714	CHD3	93	97.794	Pan_troglodytes
ENSCGRG00000007878	Chd3	99	97.794	ENSPANG00000023938	CHD3	93	97.794	Papio_anubis
ENSCGRG00000007878	Chd3	97	70.255	ENSPKIG00000006305	chd3	99	73.618	Paramormyrops_kingsleyae
ENSCGRG00000007878	Chd3	62	88.769	ENSPSIG00000010177	CHD3	99	89.128	Pelodiscus_sinensis
ENSCGRG00000007878	Chd3	99	98.529	ENSPEMG00000014262	Chd3	94	98.529	Peromyscus_maniculatus_bairdii
ENSCGRG00000007878	Chd3	99	94.118	ENSPCIG00000005442	CHD3	93	96.341	Phascolarctos_cinereus
ENSCGRG00000007878	Chd3	91	78.275	ENSPFOG00000012464	chd3	86	76.964	Poecilia_formosa
ENSCGRG00000007878	Chd3	87	69.726	ENSPLAG00000002887	chd3	94	71.024	Poecilia_latipinna
ENSCGRG00000007878	Chd3	85	80.332	ENSPREG00000011044	chd3	94	77.540	Poecilia_reticulata
ENSCGRG00000007878	Chd3	97	90.909	ENSPPYG00000007940	CHD3	92	90.909	Pongo_abelii
ENSCGRG00000007878	Chd3	95	96.324	ENSPCAG00000004350	CHD3	91	96.324	Procavia_capensis
ENSCGRG00000007878	Chd3	99	97.794	ENSPCOG00000020952	CHD3	93	97.794	Propithecus_coquereli
ENSCGRG00000007878	Chd3	85	98.005	ENSPVAG00000016344	CHD3	81	98.005	Pteropus_vampyrus
ENSCGRG00000007878	Chd3	95	76.674	ENSPNAG00000020393	chd3	93	77.414	Pygocentrus_nattereri
ENSCGRG00000007878	Chd3	92	90.930	ENSRNOG00000009722	Chd3	94	91.105	Rattus_norvegicus
ENSCGRG00000007878	Chd3	99	97.794	ENSRBIG00000033562	CHD3	93	97.794	Rhinopithecus_bieti
ENSCGRG00000007878	Chd3	99	97.794	ENSRROG00000029554	CHD3	94	97.727	Rhinopithecus_roxellana
ENSCGRG00000007878	Chd3	99	97.794	ENSSBOG00000020719	CHD3	93	97.794	Saimiri_boliviensis_boliviensis
ENSCGRG00000007878	Chd3	99	96.094	ENSSHAG00000014412	CHD3	94	96.094	Sarcophilus_harrisii
ENSCGRG00000007878	Chd3	85	72.900	ENSSFOG00015023123	chd3	93	68.452	Scleropages_formosus
ENSCGRG00000007878	Chd3	74	89.796	ENSSMAG00000006451	chd3	94	68.578	Scophthalmus_maximus
ENSCGRG00000007878	Chd3	52	80.918	ENSSDUG00000005792	chd3	95	70.402	Seriola_dumerili
ENSCGRG00000007878	Chd3	90	76.858	ENSSPAG00000013694	chd3	87	78.459	Stegastes_partitus
ENSCGRG00000007878	Chd3	99	98.529	ENSSSCG00000021363	CHD3	93	98.529	Sus_scrofa
ENSCGRG00000007878	Chd3	75	75.424	ENSTRUG00000014990	chd3	89	71.909	Takifugu_rubripes
ENSCGRG00000007878	Chd3	98	65.993	ENSTNIG00000012998	chd3	99	66.187	Tetraodon_nigroviridis
ENSCGRG00000007878	Chd3	64	100.000	ENSTBEG00000011454	-	66	100.000	Tupaia_belangeri
ENSCGRG00000007878	Chd3	97	97.794	ENSTTRG00000010295	CHD3	91	97.794	Tursiops_truncatus
ENSCGRG00000007878	Chd3	92	88.986	ENSUAMG00000005475	CHD3	94	89.391	Ursus_americanus
ENSCGRG00000007878	Chd3	55	98.142	ENSVPAG00000010794	-	56	98.142	Vicugna_pacos
ENSCGRG00000007878	Chd3	95	98.529	ENSVVUG00000028011	CHD3	87	98.529	Vulpes_vulpes
ENSCGRG00000007878	Chd3	97	68.811	ENSXETG00000012991	chd3	89	81.395	Xenopus_tropicalis
ENSCGRG00000007878	Chd3	55	83.070	ENSXCOG00000000809	chd3	98	72.865	Xiphophorus_couchianus
ENSCGRG00000007878	Chd3	76	82.569	ENSXMAG00000016035	chd3	89	82.569	Xiphophorus_maculatus