EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000008531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 7420 bases
Position: chrJH000608.1:32010-39429
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	1	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	2	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	3	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	4	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	5	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	6	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	7	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	8	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	9	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	10	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	11	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	12	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	13	14
ENSCGRP00000011727	zf-C2H2	PF00096.26	8.4e-84	14	14
ENSCGRP00000011727	zf-met	PF12874.7	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000011913	-	1623	-	ENSCGRP00000011727	540 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000008531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000008531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000008531	-	92	34.579	ENSCGRG00000009496	Sall1	58	38.202
ENSCGRG00000008531	-	90	55.508	ENSCGRG00000015809	-	57	55.508
ENSCGRG00000008531	-	88	46.939	ENSCGRG00000000462	Sall4	58	47.368
ENSCGRG00000008531	-	90	44.882	ENSCGRG00000013485	-	100	44.882
ENSCGRG00000008531	-	98	55.660	ENSCGRG00000004206	-	93	55.660
ENSCGRG00000008531	-	92	52.985	ENSCGRG00000000632	-	100	50.679
ENSCGRG00000008531	-	99	50.227	ENSCGRG00000012088	Zfp560	73	50.227
ENSCGRG00000008531	-	90	48.232	ENSCGRG00000018332	Zfp53	85	48.232
ENSCGRG00000008531	-	90	57.522	ENSCGRG00000000411	-	99	55.000
ENSCGRG00000008531	-	85	41.667	ENSCGRG00000009080	Snai1	84	41.509
ENSCGRG00000008531	-	86	47.917	ENSCGRG00000001380	Scrt2	63	47.917
ENSCGRG00000008531	-	89	35.204	ENSCGRG00000014850	-	92	35.204
ENSCGRG00000008531	-	90	42.500	ENSCGRG00000012119	Snai2	52	42.500
ENSCGRG00000008531	-	91	47.703	ENSCGRG00000016421	-	73	47.703
ENSCGRG00000008531	-	93	42.500	ENSCGRG00000010996	-	74	42.500
ENSCGRG00000008531	-	89	48.858	ENSCGRG00000001582	Zkscan3	51	48.416
ENSCGRG00000008531	-	85	44.565	ENSCGRG00000004814	Patz1	60	32.639
ENSCGRG00000008531	-	87	41.322	ENSCGRG00000008703	Wt1	55	40.336
ENSCGRG00000008531	-	89	50.903	ENSCGRG00000006987	Zfp768	53	50.352
ENSCGRG00000008531	-	90	48.857	ENSCGRG00000013626	Zfp715	74	49.119
ENSCGRG00000008531	-	97	50.158	ENSCGRG00000008922	2610008E11Rik	83	50.158
ENSCGRG00000008531	-	89	39.362	ENSCGRG00000016739	Zfp423	98	36.207
ENSCGRG00000008531	-	96	46.495	ENSCGRG00000015629	-	86	46.495
ENSCGRG00000008531	-	92	50.000	ENSCGRG00000016788	-	86	50.000
ENSCGRG00000008531	-	94	47.606	ENSCGRG00000014813	Zfp454	71	47.606
ENSCGRG00000008531	-	91	38.148	ENSCGRG00000014598	Zfp319	91	37.149
ENSCGRG00000008531	-	90	48.225	ENSCGRG00000000280	-	83	48.225
ENSCGRG00000008531	-	98	50.562	ENSCGRG00000009742	-	87	51.542
ENSCGRG00000008531	-	97	35.600	ENSCGRG00000012333	Zfp574	88	34.420
ENSCGRG00000008531	-	90	43.023	ENSCGRG00000014932	Snai3	76	43.023
ENSCGRG00000008531	-	91	53.165	ENSCGRG00000017528	Zfp94	90	53.165
ENSCGRG00000008531	-	98	53.710	ENSCGRG00000002730	Zfp39	88	53.710
ENSCGRG00000008531	-	90	51.293	ENSCGRG00000000778	-	90	49.528
ENSCGRG00000008531	-	83	45.312	ENSCGRG00000003120	Zfp367	64	45.312
ENSCGRG00000008531	-	96	41.111	ENSCGRG00000009462	Zfp236	68	41.429
ENSCGRG00000008531	-	98	48.225	ENSCGRG00000010436	-	86	48.225
ENSCGRG00000008531	-	92	46.287	ENSCGRG00000013919	Zfp709	81	46.287
ENSCGRG00000008531	-	97	48.232	ENSCGRG00000015037	Zfp354a	93	48.232
ENSCGRG00000008531	-	92	56.446	ENSCGRG00000015327	Zfp112	61	56.446
ENSCGRG00000008531	-	95	37.168	ENSCGRG00000015472	Repin1	91	31.054
ENSCGRG00000008531	-	93	50.000	ENSCGRG00000012659	Mynn	53	50.000
ENSCGRG00000008531	-	99	54.297	ENSCGRG00000008411	Gm3854	90	54.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000008531	-	92	58.081	ENSAOCG00000013672	-	98	58.081	Amphiprion_ocellaris
ENSCGRG00000008531	-	94	50.674	ENSACLG00000008821	-	97	50.588	Astatotilapia_calliptera
ENSCGRG00000008531	-	88	50.909	ENSAMXG00000036633	-	63	50.909	Astyanax_mexicanus
ENSCGRG00000008531	-	91	50.719	ENSAMXG00000040677	-	87	50.719	Astyanax_mexicanus
ENSCGRG00000008531	-	90	54.114	ENSAMXG00000043423	-	79	54.114	Astyanax_mexicanus
ENSCGRG00000008531	-	90	53.252	ENSAMXG00000037981	-	74	53.252	Astyanax_mexicanus
ENSCGRG00000008531	-	90	48.276	ENSAMXG00000036241	-	86	48.276	Astyanax_mexicanus
ENSCGRG00000008531	-	99	54.386	ENSTSYG00000006246	-	96	56.769	Carlito_syrichta
ENSCGRG00000008531	-	98	50.562	ENSCGRG00001012803	-	87	51.542	Cricetulus_griseus_chok1gshd
ENSCGRG00000008531	-	99	88.592	ENSCGRG00001024303	-	99	93.659	Cricetulus_griseus_chok1gshd
ENSCGRG00000008531	-	96	63.816	ENSCGRG00001019143	-	94	54.472	Cricetulus_griseus_chok1gshd
ENSCGRG00000008531	-	90	47.847	ENSEBUG00000003236	-	94	47.642	Eptatretus_burgeri
ENSCGRG00000008531	-	90	45.780	ENSEBUG00000007375	-	84	45.780	Eptatretus_burgeri
ENSCGRG00000008531	-	90	46.823	ENSEBUG00000015834	-	88	46.823	Eptatretus_burgeri
ENSCGRG00000008531	-	90	41.849	ENSEBUG00000015993	-	66	41.412	Eptatretus_burgeri
ENSCGRG00000008531	-	97	44.186	ENSEBUG00000003590	-	85	44.186	Eptatretus_burgeri
ENSCGRG00000008531	-	99	46.495	ENSEBUG00000017017	-	67	47.471	Eptatretus_burgeri
ENSCGRG00000008531	-	90	46.923	ENSEBUG00000001121	-	78	46.923	Eptatretus_burgeri
ENSCGRG00000008531	-	90	48.843	ENSIPUG00000013315	-	94	48.843	Ictalurus_punctatus
ENSCGRG00000008531	-	98	53.110	ENSMAUG00000016437	-	100	58.575	Mesocricetus_auratus
ENSCGRG00000008531	-	98	50.338	ENSMAUG00000005691	-	82	50.338	Mesocricetus_auratus
ENSCGRG00000008531	-	98	50.000	ENSMOCG00000000365	-	86	50.000	Microtus_ochrogaster
ENSCGRG00000008531	-	98	51.556	MGP_CAROLIEiJ_G0018660	-	70	53.793	Mus_caroli
ENSCGRG00000008531	-	98	55.932	MGP_CAROLIEiJ_G0018683	Zfp493	92	55.932	Mus_caroli
ENSCGRG00000008531	-	94	50.955	ENSMUSG00000091474	2610021A01Rik	64	54.062	Mus_musculus
ENSCGRG00000008531	-	98	51.701	ENSMUSG00000074824	Rslcan18	74	52.863	Mus_musculus
ENSCGRG00000008531	-	93	51.708	MGP_PahariEiJ_G0012839	-	66	51.708	Mus_pahari
ENSCGRG00000008531	-	98	53.793	MGP_SPRETEiJ_G0019543	-	72	53.000	Mus_spretus
ENSCGRG00000008531	-	91	43.624	ENSPMAG00000000404	-	99	43.624	Petromyzon_marinus
ENSCGRG00000008531	-	93	54.545	ENSPNAG00000014492	-	91	54.545	Pygocentrus_nattereri
ENSCGRG00000008531	-	89	54.098	ENSPNAG00000003017	-	94	54.098	Pygocentrus_nattereri
ENSCGRG00000008531	-	98	54.604	ENSSSCG00000040389	-	93	54.604	Sus_scrofa
ENSCGRG00000008531	-	91	38.889	ENSTRUG00000014476	-	88	38.889	Takifugu_rubripes