EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000009211 (Gene tree)
Gene ID: -
Gene Symbol: Sbds
Alias: 4733401P19Rik|Shwachman-Bodian-Diamond syndrome homolog (human)
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 6150 bases
Position: chrJH002731.1:67489-73638
Accession: 100752195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000012679	SBDS	PF01172.18	3e-19	1	1
ENSCGRP00000012680	SBDS	PF01172.18	1.1e-18	1	1
ENSCGRP00000012680	SBDS_C	PF09377.10	2.6e-39	1	1
ENSCGRP00000012679	SBDS_C	PF09377.10	5.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000012879	-	1486	-	ENSCGRP00000012679	181 (aa)	-	G3IH72
ENSCGRT00000012880	-	624	XM_007654238	ENSCGRP00000012680	207 (aa)	XP_007652428	-

Gene Model

Click here to download ENSCGRG00000009211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000009211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000009211	Sbds	100	96.135	ENSG00000126524	SBDS	83	96.135	Homo_sapiens
ENSCGRG00000009211	Sbds	99	83.010	ENSAPOG00000014285	sbds	83	83.010	Acanthochromis_polyacanthus
ENSCGRG00000009211	Sbds	100	95.652	ENSAMEG00000018167	SBDS	83	95.652	Ailuropoda_melanoleuca
ENSCGRG00000009211	Sbds	99	82.775	ENSACIG00000007308	sbds	83	82.775	Amphilophus_citrinellus
ENSCGRG00000009211	Sbds	99	83.010	ENSAOCG00000016770	sbds	83	83.010	Amphiprion_ocellaris
ENSCGRG00000009211	Sbds	99	83.495	ENSAPEG00000015897	sbds	83	83.495	Amphiprion_percula
ENSCGRG00000009211	Sbds	99	83.981	ENSATEG00000006901	sbds	83	83.981	Anabas_testudineus
ENSCGRG00000009211	Sbds	91	92.073	ENSANAG00000024342	-	81	91.935	Aotus_nancymaae
ENSCGRG00000009211	Sbds	100	95.652	ENSANAG00000037501	-	100	95.652	Aotus_nancymaae
ENSCGRG00000009211	Sbds	99	84.466	ENSACLG00000018750	sbds	83	84.466	Astatotilapia_calliptera
ENSCGRG00000009211	Sbds	100	84.058	ENSAMXG00000005361	sbds	83	84.058	Astyanax_mexicanus
ENSCGRG00000009211	Sbds	100	96.618	ENSBTAG00000004051	SBDS	83	96.618	Bos_taurus
ENSCGRG00000009211	Sbds	98	53.922	WBGene00021063	sbds-1	81	53.922	Caenorhabditis_elegans
ENSCGRG00000009211	Sbds	100	95.652	ENSCJAG00000041007	SBDS	83	95.652	Callithrix_jacchus
ENSCGRG00000009211	Sbds	100	95.169	ENSCAFG00000010797	SBDS	82	95.169	Canis_familiaris
ENSCGRG00000009211	Sbds	100	95.169	ENSCAFG00020005357	SBDS	83	95.169	Canis_lupus_dingo
ENSCGRG00000009211	Sbds	100	96.618	ENSCHIG00000026854	SBDS	83	96.618	Capra_hircus
ENSCGRG00000009211	Sbds	100	96.135	ENSTSYG00000033822	SBDS	83	96.135	Carlito_syrichta
ENSCGRG00000009211	Sbds	79	96.341	ENSCAPG00000006634	SBDS	100	96.341	Cavia_aperea
ENSCGRG00000009211	Sbds	100	97.101	ENSCPOG00000036143	SBDS	83	97.101	Cavia_porcellus
ENSCGRG00000009211	Sbds	100	95.652	ENSCCAG00000020671	SBDS	83	95.652	Cebus_capucinus
ENSCGRG00000009211	Sbds	100	96.135	ENSCATG00000039026	SBDS	83	96.135	Cercocebus_atys
ENSCGRG00000009211	Sbds	99	70.048	ENSCLAG00000002113	-	81	70.048	Chinchilla_lanigera
ENSCGRG00000009211	Sbds	100	96.618	ENSCLAG00000005721	-	83	96.618	Chinchilla_lanigera
ENSCGRG00000009211	Sbds	100	96.135	ENSCSAG00000018275	SBDS	83	96.135	Chlorocebus_sabaeus
ENSCGRG00000009211	Sbds	100	90.821	ENSCHOG00000003795	SBDS	83	90.821	Choloepus_hoffmanni
ENSCGRG00000009211	Sbds	100	88.889	ENSCPBG00000014893	SBDS	83	88.889	Chrysemys_picta_bellii
ENSCGRG00000009211	Sbds	99	65.700	ENSCSAVG00000011811	-	83	65.700	Ciona_savignyi
ENSCGRG00000009211	Sbds	100	95.652	ENSCANG00000032368	SBDS	83	95.652	Colobus_angolensis_palliatus
ENSCGRG00000009211	Sbds	79	100.000	ENSCGRG00001019886	Sbds	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000009211	Sbds	99	81.068	ENSCSEG00000005798	sbds	83	81.068	Cynoglossus_semilaevis
ENSCGRG00000009211	Sbds	99	81.068	ENSCVAG00000001053	sbds	83	81.068	Cyprinodon_variegatus
ENSCGRG00000009211	Sbds	100	83.575	ENSDARG00000027803	sbds	83	83.575	Danio_rerio
ENSCGRG00000009211	Sbds	100	96.135	ENSDNOG00000041174	SBDS	83	96.135	Dasypus_novemcinctus
ENSCGRG00000009211	Sbds	100	97.101	ENSDORG00000026218	Sbds	83	97.101	Dipodomys_ordii
ENSCGRG00000009211	Sbds	94	51.744	FBgn0035714	CG8549	83	54.327	Drosophila_melanogaster
ENSCGRG00000009211	Sbds	100	64.251	ENSEBUG00000015780	sbds	92	64.251	Eptatretus_burgeri
ENSCGRG00000009211	Sbds	100	96.618	ENSEASG00005008821	SBDS	83	96.618	Equus_asinus_asinus
ENSCGRG00000009211	Sbds	100	96.618	ENSECAG00000008202	SBDS	83	96.618	Equus_caballus
ENSCGRG00000009211	Sbds	67	93.443	ENSEEUG00000004768	SBDS	59	93.443	Erinaceus_europaeus
ENSCGRG00000009211	Sbds	100	81.159	ENSELUG00000008382	sbds	83	81.159	Esox_lucius
ENSCGRG00000009211	Sbds	100	96.135	ENSFCAG00000022142	SBDS	83	96.135	Felis_catus
ENSCGRG00000009211	Sbds	100	88.889	ENSFALG00000013808	SBDS	83	88.889	Ficedula_albicollis
ENSCGRG00000009211	Sbds	100	97.101	ENSFDAG00000018947	-	83	97.101	Fukomys_damarensis
ENSCGRG00000009211	Sbds	99	78.155	ENSFHEG00000000708	sbds	83	78.155	Fundulus_heteroclitus
ENSCGRG00000009211	Sbds	100	82.609	ENSGMOG00000018356	sbds	82	82.609	Gadus_morhua
ENSCGRG00000009211	Sbds	100	87.923	ENSGALG00000027989	SBDS	83	87.923	Gallus_gallus
ENSCGRG00000009211	Sbds	99	79.612	ENSGAFG00000014204	sbds	90	79.612	Gambusia_affinis
ENSCGRG00000009211	Sbds	99	82.039	ENSGACG00000012697	sbds	83	82.039	Gasterosteus_aculeatus
ENSCGRG00000009211	Sbds	100	89.372	ENSGAGG00000022402	SBDS	97	89.372	Gopherus_agassizii
ENSCGRG00000009211	Sbds	100	72.464	ENSGGOG00000040023	-	77	72.464	Gorilla_gorilla
ENSCGRG00000009211	Sbds	99	84.466	ENSHBUG00000002660	sbds	83	84.466	Haplochromis_burtoni
ENSCGRG00000009211	Sbds	100	95.169	ENSHGLG00000009671	SBDS	83	95.169	Heterocephalus_glaber_female
ENSCGRG00000009211	Sbds	100	95.169	ENSHGLG00100011332	SBDS	83	95.169	Heterocephalus_glaber_male
ENSCGRG00000009211	Sbds	99	79.612	ENSHCOG00000018606	sbds	83	79.612	Hippocampus_comes
ENSCGRG00000009211	Sbds	100	85.024	ENSIPUG00000006536	sbds	83	85.024	Ictalurus_punctatus
ENSCGRG00000009211	Sbds	100	94.203	ENSJJAG00000012033	-	83	94.203	Jaculus_jaculus
ENSCGRG00000009211	Sbds	99	65.534	ENSJJAG00000003934	-	78	65.700	Jaculus_jaculus
ENSCGRG00000009211	Sbds	99	83.010	ENSKMAG00000018542	sbds	83	83.010	Kryptolebias_marmoratus
ENSCGRG00000009211	Sbds	99	81.068	ENSLBEG00000016687	sbds	83	81.068	Labrus_bergylta
ENSCGRG00000009211	Sbds	81	80.952	ENSLACG00000018916	SBDS	68	80.952	Latimeria_chalumnae
ENSCGRG00000009211	Sbds	100	85.990	ENSLOCG00000004073	sbds	83	85.990	Lepisosteus_oculatus
ENSCGRG00000009211	Sbds	100	94.203	ENSLAFG00000008763	SBDS	83	94.203	Loxodonta_africana
ENSCGRG00000009211	Sbds	100	96.135	ENSMFAG00000032620	SBDS	83	96.135	Macaca_fascicularis
ENSCGRG00000009211	Sbds	100	96.135	ENSMMUG00000045653	SBDS	83	96.135	Macaca_mulatta
ENSCGRG00000009211	Sbds	100	96.135	ENSMNEG00000031523	SBDS	83	96.135	Macaca_nemestrina
ENSCGRG00000009211	Sbds	100	72.464	ENSMLEG00000036826	SBDS	56	98.291	Mandrillus_leucophaeus
ENSCGRG00000009211	Sbds	99	83.010	ENSMAMG00000016062	sbds	83	83.010	Mastacembelus_armatus
ENSCGRG00000009211	Sbds	99	84.466	ENSMZEG00005024385	sbds	83	84.466	Maylandia_zebra
ENSCGRG00000009211	Sbds	100	87.923	ENSMGAG00000002119	SBDS	83	87.923	Meleagris_gallopavo
ENSCGRG00000009211	Sbds	99	75.243	ENSMAUG00000022214	-	80	75.243	Mesocricetus_auratus
ENSCGRG00000009211	Sbds	100	96.618	ENSMICG00000014366	SBDS	83	96.618	Microcebus_murinus
ENSCGRG00000009211	Sbds	100	99.034	ENSMOCG00000011739	Sbds	83	99.034	Microtus_ochrogaster
ENSCGRG00000009211	Sbds	99	70.048	ENSMMOG00000005061	sbds	83	69.811	Mola_mola
ENSCGRG00000009211	Sbds	100	94.203	ENSMODG00000006644	SBDS	83	94.203	Monodelphis_domestica
ENSCGRG00000009211	Sbds	99	83.010	ENSMALG00000010219	sbds	83	83.010	Monopterus_albus
ENSCGRG00000009211	Sbds	100	98.551	MGP_CAROLIEiJ_G0027800	Sbds	99	98.837	Mus_caroli
ENSCGRG00000009211	Sbds	100	98.068	ENSMUSG00000025337	Sbds	100	98.844	Mus_musculus
ENSCGRG00000009211	Sbds	100	98.551	MGP_PahariEiJ_G0024384	Sbds	100	98.844	Mus_pahari
ENSCGRG00000009211	Sbds	100	98.068	MGP_SPRETEiJ_G0028798	Sbds	100	98.266	Mus_spretus
ENSCGRG00000009211	Sbds	81	92.857	ENSMPUG00000016192	SBDS	97	92.857	Mustela_putorius_furo
ENSCGRG00000009211	Sbds	88	93.407	ENSMLUG00000013575	SBDS	100	93.407	Myotis_lucifugus
ENSCGRG00000009211	Sbds	100	98.068	ENSNGAG00000012093	Sbds	83	98.068	Nannospalax_galili
ENSCGRG00000009211	Sbds	99	84.466	ENSNBRG00000017027	sbds	83	84.466	Neolamprologus_brichardi
ENSCGRG00000009211	Sbds	100	96.135	ENSNLEG00000013288	SBDS	83	96.135	Nomascus_leucogenys
ENSCGRG00000009211	Sbds	100	94.686	ENSOPRG00000008721	SBDS	83	94.686	Ochotona_princeps
ENSCGRG00000009211	Sbds	99	75.728	ENSODEG00000001116	-	81	75.728	Octodon_degus
ENSCGRG00000009211	Sbds	94	76.923	ENSODEG00000000137	-	74	81.122	Octodon_degus
ENSCGRG00000009211	Sbds	99	89.806	ENSODEG00000019253	-	69	89.806	Octodon_degus
ENSCGRG00000009211	Sbds	99	83.495	ENSONIG00000005874	sbds	83	83.495	Oreochromis_niloticus
ENSCGRG00000009211	Sbds	100	89.855	ENSOANG00000007674	-	100	89.855	Ornithorhynchus_anatinus
ENSCGRG00000009211	Sbds	100	95.169	ENSOCUG00000003170	SBDS	83	95.169	Oryctolagus_cuniculus
ENSCGRG00000009211	Sbds	99	80.583	ENSORLG00000023489	sbds	83	80.583	Oryzias_latipes
ENSCGRG00000009211	Sbds	99	80.097	ENSORLG00020019282	sbds	83	80.097	Oryzias_latipes_hni
ENSCGRG00000009211	Sbds	99	80.097	ENSORLG00015008005	sbds	83	80.097	Oryzias_latipes_hsok
ENSCGRG00000009211	Sbds	99	81.068	ENSOMEG00000022747	sbds	83	81.068	Oryzias_melastigma
ENSCGRG00000009211	Sbds	100	88.406	ENSOGAG00000015036	-	83	88.406	Otolemur_garnettii
ENSCGRG00000009211	Sbds	100	96.618	ENSOGAG00000009011	-	83	96.618	Otolemur_garnettii
ENSCGRG00000009211	Sbds	100	96.618	ENSOARG00000010609	SBDS	83	96.618	Ovis_aries
ENSCGRG00000009211	Sbds	100	95.169	ENSPPAG00000043889	-	83	95.169	Pan_paniscus
ENSCGRG00000009211	Sbds	100	96.135	ENSPPRG00000002307	SBDS	83	96.135	Panthera_pardus
ENSCGRG00000009211	Sbds	100	96.135	ENSPTIG00000021308	SBDS	83	96.135	Panthera_tigris_altaica
ENSCGRG00000009211	Sbds	92	96.407	ENSPTRG00000048174	-	74	96.407	Pan_troglodytes
ENSCGRG00000009211	Sbds	93	85.492	ENSPTRG00000050835	-	83	85.492	Pan_troglodytes
ENSCGRG00000009211	Sbds	93	85.492	ENSPTRG00000047744	-	83	85.492	Pan_troglodytes
ENSCGRG00000009211	Sbds	100	96.135	ENSPTRG00000019254	SBDS	83	96.135	Pan_troglodytes
ENSCGRG00000009211	Sbds	100	95.652	ENSPANG00000004078	SBDS	83	95.652	Papio_anubis
ENSCGRG00000009211	Sbds	100	83.575	ENSPKIG00000006489	sbds	83	83.575	Paramormyrops_kingsleyae
ENSCGRG00000009211	Sbds	100	89.372	ENSPSIG00000014603	SBDS	99	89.372	Pelodiscus_sinensis
ENSCGRG00000009211	Sbds	99	81.553	ENSPMGG00000004246	sbds	83	81.553	Periophthalmus_magnuspinnatus
ENSCGRG00000009211	Sbds	100	98.068	ENSPEMG00000008728	Sbds	83	98.068	Peromyscus_maniculatus_bairdii
ENSCGRG00000009211	Sbds	100	93.720	ENSPCIG00000029718	SBDS	83	93.720	Phascolarctos_cinereus
ENSCGRG00000009211	Sbds	99	80.583	ENSPFOG00000015837	sbds	83	80.583	Poecilia_formosa
ENSCGRG00000009211	Sbds	99	80.583	ENSPLAG00000003641	sbds	83	80.583	Poecilia_latipinna
ENSCGRG00000009211	Sbds	99	80.583	ENSPMEG00000019483	sbds	83	80.583	Poecilia_mexicana
ENSCGRG00000009211	Sbds	99	80.097	ENSPREG00000018758	sbds	83	80.097	Poecilia_reticulata
ENSCGRG00000009211	Sbds	100	96.135	ENSPPYG00000017513	SBDS	83	96.135	Pongo_abelii
ENSCGRG00000009211	Sbds	100	96.618	ENSPCOG00000021098	SBDS	83	96.618	Propithecus_coquereli
ENSCGRG00000009211	Sbds	100	96.135	ENSPVAG00000009369	SBDS	83	96.135	Pteropus_vampyrus
ENSCGRG00000009211	Sbds	99	83.981	ENSPNYG00000022403	sbds	83	83.981	Pundamilia_nyererei
ENSCGRG00000009211	Sbds	100	84.541	ENSPNAG00000001120	sbds	83	84.541	Pygocentrus_nattereri
ENSCGRG00000009211	Sbds	100	98.068	ENSRNOG00000000888	Sbds	83	98.068	Rattus_norvegicus
ENSCGRG00000009211	Sbds	100	96.135	ENSRBIG00000035557	SBDS	90	96.135	Rhinopithecus_bieti
ENSCGRG00000009211	Sbds	100	96.135	ENSRROG00000040842	-	90	96.135	Rhinopithecus_roxellana
ENSCGRG00000009211	Sbds	100	76.812	ENSRROG00000041986	-	81	74.396	Rhinopithecus_roxellana
ENSCGRG00000009211	Sbds	95	40.686	YLR022C	-	79	40.196	Saccharomyces_cerevisiae
ENSCGRG00000009211	Sbds	100	95.169	ENSSBOG00000022460	SBDS	89	95.169	Saimiri_boliviensis_boliviensis
ENSCGRG00000009211	Sbds	99	78.537	ENSSHAG00000010263	SBDS	83	78.537	Sarcophilus_harrisii
ENSCGRG00000009211	Sbds	100	85.024	ENSSFOG00015001108	sbds	83	85.024	Scleropages_formosus
ENSCGRG00000009211	Sbds	99	83.981	ENSSMAG00000020506	sbds	83	83.981	Scophthalmus_maximus
ENSCGRG00000009211	Sbds	99	82.524	ENSSDUG00000001528	sbds	83	82.524	Seriola_dumerili
ENSCGRG00000009211	Sbds	99	83.010	ENSSLDG00000003659	sbds	83	83.010	Seriola_lalandi_dorsalis
ENSCGRG00000009211	Sbds	61	98.182	ENSSARG00000013132	-	72	98.182	Sorex_araneus
ENSCGRG00000009211	Sbds	68	100.000	ENSSARG00000001899	-	56	100.000	Sorex_araneus
ENSCGRG00000009211	Sbds	100	85.507	ENSSPUG00000002699	SBDS	83	85.507	Sphenodon_punctatus
ENSCGRG00000009211	Sbds	99	83.010	ENSSPAG00000016419	sbds	84	76.500	Stegastes_partitus
ENSCGRG00000009211	Sbds	100	96.135	ENSSSCG00000007732	SBDS	83	96.135	Sus_scrofa
ENSCGRG00000009211	Sbds	80	88.485	ENSTGUG00000003426	SBDS	99	88.485	Taeniopygia_guttata
ENSCGRG00000009211	Sbds	99	83.010	ENSTRUG00000021443	sbds	83	83.010	Takifugu_rubripes
ENSCGRG00000009211	Sbds	99	81.553	ENSTNIG00000019000	sbds	83	81.553	Tetraodon_nigroviridis
ENSCGRG00000009211	Sbds	91	78.788	ENSTBEG00000001178	SBDS	78	78.788	Tupaia_belangeri
ENSCGRG00000009211	Sbds	100	72.464	ENSTTRG00000003921	SBDS	83	72.464	Tursiops_truncatus
ENSCGRG00000009211	Sbds	100	95.652	ENSUAMG00000001326	SBDS	83	95.652	Ursus_americanus
ENSCGRG00000009211	Sbds	100	95.652	ENSUMAG00000015353	SBDS	83	95.652	Ursus_maritimus
ENSCGRG00000009211	Sbds	100	95.169	ENSVVUG00000016478	SBDS	83	95.169	Vulpes_vulpes
ENSCGRG00000009211	Sbds	100	85.024	ENSXETG00000010093	sbds	83	85.024	Xenopus_tropicalis
ENSCGRG00000009211	Sbds	94	77.059	ENSXCOG00000010639	sbds	76	77.059	Xiphophorus_couchianus
ENSCGRG00000009211	Sbds	99	81.068	ENSXMAG00000006065	sbds	83	81.068	Xiphophorus_maculatus