EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000009508 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 21958 bases
Position: chrJH000638.1:716567-738524
Accession: 100768837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000013081	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000013287	-	3319	XM_003506195	ENSCGRP00000013081	215 (aa)	XP_003506243	G3HRK4

Gene Model

Click here to download ENSCGRG00000009508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000009508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000009508	-	78	35.882	ENSCGRG00000013798	Rab39b	80	35.882
ENSCGRG00000009508	-	78	42.442	ENSCGRG00000011649	Rab7	83	42.442
ENSCGRG00000009508	-	76	32.121	ENSCGRG00000015400	-	88	31.737
ENSCGRG00000009508	-	82	45.198	ENSCGRG00000015564	Rab1b	87	45.198
ENSCGRG00000009508	-	80	32.749	ENSCGRG00000019639	Rasl2-9	76	32.749
ENSCGRG00000009508	-	75	38.554	ENSCGRG00000013497	Rab33a	70	38.554
ENSCGRG00000009508	-	75	32.515	ENSCGRG00000002586	Nras	85	32.515
ENSCGRG00000009508	-	91	41.546	ENSCGRG00000012173	Rab25	94	41.546
ENSCGRG00000009508	-	73	33.750	ENSCGRG00000013186	Rab36	60	33.750
ENSCGRG00000009508	-	89	36.979	ENSCGRG00000012126	Rab13	95	36.979
ENSCGRG00000009508	-	80	33.146	ENSCGRG00000010918	Hras	94	32.778
ENSCGRG00000009508	-	93	36.765	ENSCGRG00000017790	Rab9	97	36.765
ENSCGRG00000009508	-	90	34.328	ENSCGRG00000002809	Rab9b	97	34.328
ENSCGRG00000009508	-	90	43.367	ENSCGRG00000008456	-	95	43.367
ENSCGRG00000009508	-	62	30.986	ENSCGRG00000016383	Arl8b	73	30.986
ENSCGRG00000009508	-	75	44.720	ENSCGRG00000005328	Rab14	75	44.720
ENSCGRG00000009508	-	97	86.603	ENSCGRG00000007534	Rab5c	97	86.603
ENSCGRG00000009508	-	74	37.500	ENSCGRG00000013630	Rab23	67	37.500
ENSCGRG00000009508	-	78	42.857	ENSCGRG00000014842	Rab30	83	42.857
ENSCGRG00000009508	-	91	41.667	ENSCGRG00000018359	Rab11a	94	41.667
ENSCGRG00000009508	-	100	81.860	ENSCGRG00000002786	-	100	81.860
ENSCGRG00000009508	-	90	40.201	ENSCGRG00000010264	-	97	40.201
ENSCGRG00000009508	-	91	43.204	ENSCGRG00000010967	Rab11b	94	43.204
ENSCGRG00000009508	-	90	38.974	ENSCGRG00000017201	Rab18	93	38.974
ENSCGRG00000009508	-	80	35.088	ENSCGRG00000007401	-	75	35.088
ENSCGRG00000009508	-	79	35.503	ENSCGRG00000010112	Rab15	85	35.503
ENSCGRG00000009508	-	82	39.344	ENSCGRG00000015464	Rab33b	79	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000009508	-	100	99.535	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSCGRG00000009508	-	100	98.157	ENSAMEG00000003196	RAB5B	100	98.157	Ailuropoda_melanoleuca
ENSCGRG00000009508	-	100	96.744	ENSACAG00000005380	RAB5B	100	96.744	Anolis_carolinensis
ENSCGRG00000009508	-	100	99.535	ENSANAG00000033215	RAB5B	95	99.535	Aotus_nancymaae
ENSCGRG00000009508	-	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSCGRG00000009508	-	100	99.535	ENSCJAG00000041780	RAB5B	95	99.535	Callithrix_jacchus
ENSCGRG00000009508	-	100	99.535	ENSCAFG00000000087	RAB5B	100	99.535	Canis_familiaris
ENSCGRG00000009508	-	100	99.535	ENSCAFG00020026094	RAB5B	100	99.535	Canis_lupus_dingo
ENSCGRG00000009508	-	97	99.519	ENSCHIG00000010333	RAB5B	96	99.519	Capra_hircus
ENSCGRG00000009508	-	100	99.070	ENSTSYG00000009576	RAB5B	100	99.070	Carlito_syrichta
ENSCGRG00000009508	-	100	99.535	ENSCPOG00000034818	RAB5B	100	99.535	Cavia_porcellus
ENSCGRG00000009508	-	100	98.605	ENSCCAG00000019480	RAB5B	100	98.605	Cebus_capucinus
ENSCGRG00000009508	-	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSCGRG00000009508	-	100	98.605	ENSCSAG00000005277	RAB5B	100	98.605	Chlorocebus_sabaeus
ENSCGRG00000009508	-	100	96.744	ENSCPBG00000012712	RAB5B	100	96.744	Chrysemys_picta_bellii
ENSCGRG00000009508	-	100	100.000	ENSCGRG00001000428	Rab5b	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000009508	-	100	99.535	ENSDORG00000025063	Rab5b	100	99.535	Dipodomys_ordii
ENSCGRG00000009508	-	100	99.070	ENSECAG00000023306	RAB5B	100	99.070	Equus_caballus
ENSCGRG00000009508	-	100	98.605	ENSEEUG00000006745	RAB5B	100	98.605	Erinaceus_europaeus
ENSCGRG00000009508	-	100	99.535	ENSFDAG00000008326	RAB5B	100	99.535	Fukomys_damarensis
ENSCGRG00000009508	-	100	98.605	ENSHGLG00000005995	RAB5B	100	98.605	Heterocephalus_glaber_female
ENSCGRG00000009508	-	100	98.605	ENSHGLG00100012955	RAB5B	100	98.605	Heterocephalus_glaber_male
ENSCGRG00000009508	-	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
ENSCGRG00000009508	-	100	99.070	ENSJJAG00000019506	Rab5b	100	99.070	Jaculus_jaculus
ENSCGRG00000009508	-	100	98.618	ENSLAFG00000018009	RAB5B	95	98.618	Loxodonta_africana
ENSCGRG00000009508	-	100	98.605	ENSMFAG00000029992	RAB5B	100	98.605	Macaca_fascicularis
ENSCGRG00000009508	-	100	98.605	ENSMMUG00000031853	RAB5B	100	98.605	Macaca_mulatta
ENSCGRG00000009508	-	100	98.605	ENSMNEG00000005338	RAB5B	100	98.605	Macaca_nemestrina
ENSCGRG00000009508	-	100	98.605	ENSMLEG00000034462	RAB5B	100	98.605	Mandrillus_leucophaeus
ENSCGRG00000009508	-	100	99.535	ENSMAUG00000011613	Rab5b	100	99.535	Mesocricetus_auratus
ENSCGRG00000009508	-	100	99.070	ENSMICG00000011086	RAB5B	100	99.070	Microcebus_murinus
ENSCGRG00000009508	-	100	99.535	ENSMUSG00000000711	Rab5b	100	99.535	Mus_musculus
ENSCGRG00000009508	-	100	99.535	MGP_PahariEiJ_G0031135	Rab5b	100	99.535	Mus_pahari
ENSCGRG00000009508	-	100	99.070	MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	Mus_spretus
ENSCGRG00000009508	-	99	98.148	ENSMPUG00000000946	RAB5B	89	98.148	Mustela_putorius_furo
ENSCGRG00000009508	-	100	99.535	ENSNLEG00000017570	-	100	99.535	Nomascus_leucogenys
ENSCGRG00000009508	-	100	99.535	ENSOPRG00000007883	RAB5B	100	99.535	Ochotona_princeps
ENSCGRG00000009508	-	100	99.070	ENSODEG00000003860	RAB5B	100	99.070	Octodon_degus
ENSCGRG00000009508	-	100	99.535	ENSOCUG00000013895	RAB5B	95	99.535	Oryctolagus_cuniculus
ENSCGRG00000009508	-	100	99.535	ENSOARG00000010651	RAB5B	95	99.535	Ovis_aries
ENSCGRG00000009508	-	100	99.535	ENSPPAG00000035431	RAB5B	100	99.535	Pan_paniscus
ENSCGRG00000009508	-	100	99.535	ENSPTRG00000005071	RAB5B	97	99.043	Pan_troglodytes
ENSCGRG00000009508	-	99	97.664	ENSPANG00000021075	RAB5B	97	97.664	Papio_anubis
ENSCGRG00000009508	-	100	99.535	ENSPCOG00000016461	RAB5B	100	99.535	Propithecus_coquereli
ENSCGRG00000009508	-	100	98.605	ENSRNOG00000006130	Rab5b	100	98.605	Rattus_norvegicus
ENSCGRG00000009508	-	100	98.605	ENSRBIG00000013165	RAB5B	100	98.605	Rhinopithecus_bieti
ENSCGRG00000009508	-	100	98.605	ENSRROG00000037973	RAB5B	100	98.605	Rhinopithecus_roxellana
ENSCGRG00000009508	-	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSCGRG00000009508	-	100	98.140	ENSSHAG00000007727	RAB5B	100	98.140	Sarcophilus_harrisii
ENSCGRG00000009508	-	100	99.535	ENSSARG00000006237	RAB5B	100	99.535	Sorex_araneus
ENSCGRG00000009508	-	100	96.744	ENSSPUG00000014873	RAB5B	100	96.744	Sphenodon_punctatus
ENSCGRG00000009508	-	100	99.535	ENSTTRG00000015001	RAB5B	100	99.535	Tursiops_truncatus
ENSCGRG00000009508	-	100	99.070	ENSUAMG00000014651	RAB5B	100	99.070	Ursus_americanus
ENSCGRG00000009508	-	100	99.070	ENSUMAG00000016263	RAB5B	100	99.070	Ursus_maritimus
ENSCGRG00000009508	-	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes