EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000009742 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 5280 bases
Position: chrJH001679.1:21297-26576
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	1	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	2	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	3	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	4	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	5	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	6	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	7	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	8	9
ENSCGRP00000013422	zf-C2H2	PF00096.26	2.2e-50	9	9
ENSCGRP00000013422	zf-met	PF12874.7	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000013631	-	1164	-	ENSCGRP00000013422	387 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000009742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000009742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000009742	-	79	48.864	ENSCGRG00000009462	Zfp236	70	47.619
ENSCGRG00000009742	-	94	49.393	ENSCGRG00000018332	Zfp53	92	49.393
ENSCGRG00000009742	-	89	48.851	ENSCGRG00000012659	Mynn	55	48.851
ENSCGRG00000009742	-	96	54.980	ENSCGRG00000014813	Zfp454	88	54.980
ENSCGRG00000009742	-	85	35.156	ENSCGRG00000014598	Zfp319	92	38.326
ENSCGRG00000009742	-	94	49.130	ENSCGRG00000008922	2610008E11Rik	95	49.130
ENSCGRG00000009742	-	94	57.333	ENSCGRG00000004206	-	100	57.333
ENSCGRG00000009742	-	94	48.519	ENSCGRG00000000778	-	99	50.000
ENSCGRG00000009742	-	97	51.082	ENSCGRG00000000411	-	99	53.333
ENSCGRG00000009742	-	76	50.199	ENSCGRG00000006987	Zfp768	55	47.368
ENSCGRG00000009742	-	89	43.496	ENSCGRG00000009095	Zfp202	65	43.496
ENSCGRG00000009742	-	79	43.571	ENSCGRG00000010996	-	73	43.571
ENSCGRG00000009742	-	76	42.202	ENSCGRG00000012119	Snai2	66	42.202
ENSCGRG00000009742	-	85	52.381	ENSCGRG00000000280	-	88	52.381
ENSCGRG00000009742	-	81	34.184	ENSCGRG00000014850	-	98	34.184
ENSCGRG00000009742	-	94	38.272	ENSCGRG00000001582	Zkscan3	58	48.031
ENSCGRG00000009742	-	80	38.333	ENSCGRG00000012333	Zfp574	82	36.861
ENSCGRG00000009742	-	69	44.681	ENSCGRG00000004814	Patz1	52	44.681
ENSCGRG00000009742	-	70	50.847	ENSCGRG00000001380	Scrt2	62	50.847
ENSCGRG00000009742	-	76	50.847	ENSCGRG00000013485	-	100	50.847
ENSCGRG00000009742	-	94	51.500	ENSCGRG00000013919	Zfp709	99	51.500
ENSCGRG00000009742	-	76	52.521	ENSCGRG00000015809	-	51	52.521
ENSCGRG00000009742	-	94	47.157	ENSCGRG00000013626	Zfp715	76	47.157
ENSCGRG00000009742	-	94	50.649	ENSCGRG00000002730	Zfp39	92	50.649
ENSCGRG00000009742	-	78	50.000	ENSCGRG00000015629	-	68	50.000
ENSCGRG00000009742	-	78	53.527	ENSCGRG00000017528	Zfp94	85	53.527
ENSCGRG00000009742	-	76	42.241	ENSCGRG00000008703	Wt1	53	41.176
ENSCGRG00000009742	-	94	53.097	ENSCGRG00000015037	Zfp354a	98	53.097
ENSCGRG00000009742	-	91	62.500	ENSCGRG00000008411	Gm3854	74	62.500
ENSCGRG00000009742	-	94	52.381	ENSCGRG00000010436	-	89	52.381
ENSCGRG00000009742	-	89	52.284	ENSCGRG00000016788	-	98	52.284
ENSCGRG00000009742	-	87	51.542	ENSCGRG00000008531	-	98	50.562
ENSCGRG00000009742	-	77	49.606	ENSCGRG00000016421	-	73	49.606
ENSCGRG00000009742	-	94	52.632	ENSCGRG00000012088	Zfp560	89	52.632
ENSCGRG00000009742	-	69	31.532	ENSCGRG00000011069	-	85	32.632
ENSCGRG00000009742	-	78	54.167	ENSCGRG00000015327	Zfp112	55	54.167
ENSCGRG00000009742	-	76	40.206	ENSCGRG00000016739	Zfp423	98	35.965
ENSCGRG00000009742	-	81	35.220	ENSCGRG00000015472	Repin1	84	35.220
ENSCGRG00000009742	-	95	49.558	ENSCGRG00000000632	-	98	49.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000009742	-	76	52.778	ENSAOCG00000013672	-	94	52.261	Amphiprion_ocellaris
ENSCGRG00000009742	-	83	49.778	ENSACLG00000008821	-	96	49.778	Astatotilapia_calliptera
ENSCGRG00000009742	-	76	48.583	ENSAMXG00000036633	-	62	48.583	Astyanax_mexicanus
ENSCGRG00000009742	-	73	47.917	ENSAMXG00000036241	-	83	47.222	Astyanax_mexicanus
ENSCGRG00000009742	-	77	50.000	ENSAMXG00000040677	-	87	50.000	Astyanax_mexicanus
ENSCGRG00000009742	-	77	51.190	ENSAMXG00000037981	-	78	51.190	Astyanax_mexicanus
ENSCGRG00000009742	-	79	53.182	ENSAMXG00000043423	-	98	53.182	Astyanax_mexicanus
ENSCGRG00000009742	-	93	54.626	ENSTSYG00000006246	-	99	54.626	Carlito_syrichta
ENSCGRG00000009742	-	83	48.889	ENSCGRG00001019143	-	93	48.889	Cricetulus_griseus_chok1gshd
ENSCGRG00000009742	-	100	100.000	ENSCGRG00001012803	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000009742	-	94	51.902	ENSCGRG00001024303	-	99	53.077	Cricetulus_griseus_chok1gshd
ENSCGRG00000009742	-	76	45.528	ENSEBUG00000007375	-	84	45.528	Eptatretus_burgeri
ENSCGRG00000009742	-	82	48.661	ENSEBUG00000003590	-	74	47.186	Eptatretus_burgeri
ENSCGRG00000009742	-	77	45.490	ENSEBUG00000001121	-	80	45.490	Eptatretus_burgeri
ENSCGRG00000009742	-	77	47.321	ENSEBUG00000017017	-	62	47.321	Eptatretus_burgeri
ENSCGRG00000009742	-	77	42.995	ENSEBUG00000003236	-	93	44.751	Eptatretus_burgeri
ENSCGRG00000009742	-	78	55.372	ENSEBUG00000015834	-	84	55.372	Eptatretus_burgeri
ENSCGRG00000009742	-	76	42.081	ENSEBUG00000015993	-	66	42.081	Eptatretus_burgeri
ENSCGRG00000009742	-	76	48.223	ENSIPUG00000013315	-	94	48.223	Ictalurus_punctatus
ENSCGRG00000009742	-	95	82.834	ENSMAUG00000005691	-	90	82.834	Mesocricetus_auratus
ENSCGRG00000009742	-	93	51.362	ENSMAUG00000016437	-	100	49.446	Mesocricetus_auratus
ENSCGRG00000009742	-	94	76.309	ENSMOCG00000000365	-	93	78.689	Microtus_ochrogaster
ENSCGRG00000009742	-	97	77.600	MGP_CAROLIEiJ_G0018660	-	79	80.423	Mus_caroli
ENSCGRG00000009742	-	94	54.286	MGP_CAROLIEiJ_G0018683	Zfp493	99	54.286	Mus_caroli
ENSCGRG00000009742	-	94	88.011	ENSMUSG00000074824	Rslcan18	80	88.011	Mus_musculus
ENSCGRG00000009742	-	91	58.621	ENSMUSG00000091474	2610021A01Rik	70	58.621	Mus_musculus
ENSCGRG00000009742	-	91	57.627	MGP_PahariEiJ_G0012839	-	71	57.627	Mus_pahari
ENSCGRG00000009742	-	94	79.670	MGP_SPRETEiJ_G0019543	-	78	82.561	Mus_spretus
ENSCGRG00000009742	-	78	42.609	ENSPMAG00000000404	-	99	42.609	Petromyzon_marinus
ENSCGRG00000009742	-	76	50.000	ENSPNAG00000003017	-	86	50.000	Pygocentrus_nattereri
ENSCGRG00000009742	-	88	50.883	ENSPNAG00000014492	-	89	50.883	Pygocentrus_nattereri
ENSCGRG00000009742	-	94	56.213	ENSSSCG00000040389	-	99	55.466	Sus_scrofa
ENSCGRG00000009742	-	89	38.863	ENSTRUG00000014476	-	89	38.863	Takifugu_rubripes