EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000009807 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc1
Alias: A730098D12Rik
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 25464 bases
Position: chrJH001307.1:362135-387598
Accession: 100764889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000013516	YTH	PF04146.15	9.3e-40	1	1
ENSCGRP00000013515	YTH	PF04146.15	9.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000013725	-	6826	XM_016979692	ENSCGRP00000013516	701 (aa)	XP_016835181	UPI0007DA643C
ENSCGRT00000013724	-	6880	XM_016979690	ENSCGRP00000013515	719 (aa)	XP_016835179	UPI0007DAA9D4

Gene Model

Click here to download ENSCGRG00000009807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000009807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000009807	Ythdc1	99	97.354	ENSG00000083896	YTHDC1	99	97.354	Homo_sapiens
ENSCGRG00000009807	Ythdc1	57	59.759	ENSAPOG00000013997	ythdc1	57	62.530	Acanthochromis_polyacanthus
ENSCGRG00000009807	Ythdc1	99	95.845	ENSAMEG00000005688	YTHDC1	99	95.845	Ailuropoda_melanoleuca
ENSCGRG00000009807	Ythdc1	70	58.273	ENSACIG00000019728	ythdc1	78	59.809	Amphilophus_citrinellus
ENSCGRG00000009807	Ythdc1	57	61.239	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSCGRG00000009807	Ythdc1	50	65.565	ENSAPEG00000000618	ythdc1	53	68.661	Amphiprion_percula
ENSCGRG00000009807	Ythdc1	92	84.488	ENSAPLG00000009921	YTHDC1	92	84.940	Anas_platyrhynchos
ENSCGRG00000009807	Ythdc1	92	84.211	ENSACAG00000009697	YTHDC1	91	83.459	Anolis_carolinensis
ENSCGRG00000009807	Ythdc1	99	97.218	ENSANAG00000001522	YTHDC1	99	97.218	Aotus_nancymaae
ENSCGRG00000009807	Ythdc1	92	51.479	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSCGRG00000009807	Ythdc1	92	64.918	ENSAMXG00000006978	ythdc1	91	65.543	Astyanax_mexicanus
ENSCGRG00000009807	Ythdc1	92	92.932	ENSBTAG00000015572	YTHDC1	91	93.534	Bos_taurus
ENSCGRG00000009807	Ythdc1	99	97.357	ENSCJAG00000009934	YTHDC1	99	97.357	Callithrix_jacchus
ENSCGRG00000009807	Ythdc1	99	95.706	ENSCAFG00000002821	YTHDC1	99	95.706	Canis_familiaris
ENSCGRG00000009807	Ythdc1	99	95.706	ENSCAFG00020027112	YTHDC1	99	95.706	Canis_lupus_dingo
ENSCGRG00000009807	Ythdc1	93	86.778	ENSCHIG00000004810	YTHDC1	95	91.856	Capra_hircus
ENSCGRG00000009807	Ythdc1	99	97.354	ENSTSYG00000011668	YTHDC1	99	97.354	Carlito_syrichta
ENSCGRG00000009807	Ythdc1	91	70.423	ENSCAPG00000008722	YTHDC1	90	69.127	Cavia_aperea
ENSCGRG00000009807	Ythdc1	99	90.111	ENSCPOG00000010929	YTHDC1	99	90.111	Cavia_porcellus
ENSCGRG00000009807	Ythdc1	99	97.493	ENSCCAG00000035754	YTHDC1	99	97.493	Cebus_capucinus
ENSCGRG00000009807	Ythdc1	99	97.290	ENSCATG00000036320	YTHDC1	99	97.290	Cercocebus_atys
ENSCGRG00000009807	Ythdc1	99	95.461	ENSCLAG00000005482	YTHDC1	99	95.461	Chinchilla_lanigera
ENSCGRG00000009807	Ythdc1	99	97.357	ENSCSAG00000005252	YTHDC1	99	97.357	Chlorocebus_sabaeus
ENSCGRG00000009807	Ythdc1	92	87.068	ENSCPBG00000021965	YTHDC1	94	86.420	Chrysemys_picta_bellii
ENSCGRG00000009807	Ythdc1	99	97.357	ENSCANG00000004769	YTHDC1	99	97.357	Colobus_angolensis_palliatus
ENSCGRG00000009807	Ythdc1	99	100.000	ENSCGRG00001000816	Ythdc1	99	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000009807	Ythdc1	57	60.132	ENSCSEG00000020404	ythdc1	59	66.667	Cynoglossus_semilaevis
ENSCGRG00000009807	Ythdc1	57	59.202	ENSCVAG00000022349	ythdc1	92	54.101	Cyprinodon_variegatus
ENSCGRG00000009807	Ythdc1	92	63.885	ENSDARG00000051953	ythdc1	58	78.133	Danio_rerio
ENSCGRG00000009807	Ythdc1	92	93.835	ENSDNOG00000004949	YTHDC1	91	94.436	Dasypus_novemcinctus
ENSCGRG00000009807	Ythdc1	99	96.940	ENSDORG00000013045	Ythdc1	100	96.940	Dipodomys_ordii
ENSCGRG00000009807	Ythdc1	78	100.000	ENSETEG00000001878	YTHDC1	69	100.000	Echinops_telfairi
ENSCGRG00000009807	Ythdc1	99	96.260	ENSEASG00005018383	YTHDC1	100	96.176	Equus_asinus_asinus
ENSCGRG00000009807	Ythdc1	99	95.706	ENSECAG00000018303	YTHDC1	99	95.706	Equus_caballus
ENSCGRG00000009807	Ythdc1	92	92.632	ENSEEUG00000015466	YTHDC1	91	93.233	Erinaceus_europaeus
ENSCGRG00000009807	Ythdc1	92	61.947	ENSELUG00000014029	ythdc1	93	62.000	Esox_lucius
ENSCGRG00000009807	Ythdc1	99	93.343	ENSFCAG00000026791	YTHDC1	99	93.343	Felis_catus
ENSCGRG00000009807	Ythdc1	68	89.450	ENSFALG00000006581	YTHDC1	85	93.674	Ficedula_albicollis
ENSCGRG00000009807	Ythdc1	99	93.863	ENSFDAG00000018560	YTHDC1	100	93.863	Fukomys_damarensis
ENSCGRG00000009807	Ythdc1	65	66.071	ENSFHEG00000001286	ythdc1	60	56.024	Fundulus_heteroclitus
ENSCGRG00000009807	Ythdc1	64	63.475	ENSGMOG00000018815	ythdc1	73	63.475	Gadus_morhua
ENSCGRG00000009807	Ythdc1	92	86.446	ENSGALG00000035906	YTHDC1	85	85.843	Gallus_gallus
ENSCGRG00000009807	Ythdc1	51	64.875	ENSGAFG00000001759	ythdc1	54	67.029	Gambusia_affinis
ENSCGRG00000009807	Ythdc1	57	62.150	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSCGRG00000009807	Ythdc1	92	87.037	ENSGAGG00000007108	YTHDC1	92	85.015	Gopherus_agassizii
ENSCGRG00000009807	Ythdc1	99	97.147	ENSGGOG00000021958	YTHDC1	99	97.147	Gorilla_gorilla
ENSCGRG00000009807	Ythdc1	92	51.627	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSCGRG00000009807	Ythdc1	95	70.029	ENSHGLG00000003239	-	86	72.714	Heterocephalus_glaber_female
ENSCGRG00000009807	Ythdc1	99	96.286	ENSHGLG00000006319	-	99	96.286	Heterocephalus_glaber_female
ENSCGRG00000009807	Ythdc1	92	95.210	ENSHGLG00100001556	-	91	94.760	Heterocephalus_glaber_male
ENSCGRG00000009807	Ythdc1	95	68.559	ENSHGLG00100008060	-	86	71.194	Heterocephalus_glaber_male
ENSCGRG00000009807	Ythdc1	53	68.421	ENSHCOG00000001520	ythdc1	82	68.421	Hippocampus_comes
ENSCGRG00000009807	Ythdc1	92	67.404	ENSIPUG00000018136	ythdc1	91	64.853	Ictalurus_punctatus
ENSCGRG00000009807	Ythdc1	99	96.011	ENSSTOG00000013652	YTHDC1	99	96.011	Ictidomys_tridecemlineatus
ENSCGRG00000009807	Ythdc1	92	91.473	ENSJJAG00000010268	Ythdc1	93	91.815	Jaculus_jaculus
ENSCGRG00000009807	Ythdc1	57	60.502	ENSKMAG00000006483	ythdc1	85	65.306	Kryptolebias_marmoratus
ENSCGRG00000009807	Ythdc1	62	62.990	ENSLBEG00000020831	ythdc1	71	74.286	Labrus_bergylta
ENSCGRG00000009807	Ythdc1	88	73.626	ENSLACG00000004893	YTHDC1	92	73.709	Latimeria_chalumnae
ENSCGRG00000009807	Ythdc1	92	73.013	ENSLOCG00000003045	ythdc1	91	88.462	Lepisosteus_oculatus
ENSCGRG00000009807	Ythdc1	92	91.369	ENSLAFG00000021592	YTHDC1	91	93.750	Loxodonta_africana
ENSCGRG00000009807	Ythdc1	99	97.290	ENSMFAG00000031927	YTHDC1	99	97.290	Macaca_fascicularis
ENSCGRG00000009807	Ythdc1	99	97.357	ENSMMUG00000002265	YTHDC1	99	97.357	Macaca_mulatta
ENSCGRG00000009807	Ythdc1	99	97.357	ENSMNEG00000033751	YTHDC1	99	97.357	Macaca_nemestrina
ENSCGRG00000009807	Ythdc1	99	97.357	ENSMLEG00000042147	YTHDC1	99	97.357	Mandrillus_leucophaeus
ENSCGRG00000009807	Ythdc1	56	61.631	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSCGRG00000009807	Ythdc1	92	51.479	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSCGRG00000009807	Ythdc1	92	84.361	ENSMGAG00000010391	YTHDC1	91	85.865	Meleagris_gallopavo
ENSCGRG00000009807	Ythdc1	99	99.570	ENSMAUG00000001286	Ythdc1	99	99.570	Mesocricetus_auratus
ENSCGRG00000009807	Ythdc1	99	95.742	ENSMICG00000034640	YTHDC1	99	95.742	Microcebus_murinus
ENSCGRG00000009807	Ythdc1	99	98.571	ENSMOCG00000020201	Ythdc1	99	98.571	Microtus_ochrogaster
ENSCGRG00000009807	Ythdc1	96	51.230	ENSMODG00000010076	-	95	51.807	Monodelphis_domestica
ENSCGRG00000009807	Ythdc1	65	57.660	ENSMODG00000009173	-	88	61.353	Monodelphis_domestica
ENSCGRG00000009807	Ythdc1	86	69.248	ENSMODG00000014337	-	94	69.586	Monodelphis_domestica
ENSCGRG00000009807	Ythdc1	92	88.705	ENSMODG00000020754	-	91	87.952	Monodelphis_domestica
ENSCGRG00000009807	Ythdc1	57	70.000	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSCGRG00000009807	Ythdc1	99	98.056	MGP_CAROLIEiJ_G0027347	Ythdc1	99	98.056	Mus_caroli
ENSCGRG00000009807	Ythdc1	99	97.917	ENSMUSG00000035851	Ythdc1	99	97.917	Mus_musculus
ENSCGRG00000009807	Ythdc1	99	98.194	MGP_PahariEiJ_G0017126	Ythdc1	99	98.194	Mus_pahari
ENSCGRG00000009807	Ythdc1	100	97.925	MGP_SPRETEiJ_G0028339	Ythdc1	99	98.194	Mus_spretus
ENSCGRG00000009807	Ythdc1	92	93.213	ENSMLUG00000016300	YTHDC1	92	93.363	Myotis_lucifugus
ENSCGRG00000009807	Ythdc1	60	95.952	ENSNGAG00000024000	Ythdc1	93	95.724	Nannospalax_galili
ENSCGRG00000009807	Ythdc1	57	60.187	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSCGRG00000009807	Ythdc1	99	95.323	ENSNLEG00000009202	YTHDC1	99	95.323	Nomascus_leucogenys
ENSCGRG00000009807	Ythdc1	83	81.605	ENSMEUG00000007128	YTHDC1	81	81.605	Notamacropus_eugenii
ENSCGRG00000009807	Ythdc1	76	97.734	ENSOPRG00000008986	YTHDC1	74	97.734	Ochotona_princeps
ENSCGRG00000009807	Ythdc1	99	93.593	ENSODEG00000001715	YTHDC1	99	93.593	Octodon_degus
ENSCGRG00000009807	Ythdc1	92	51.923	ENSONIG00000012651	ythdc1	59	66.590	Oreochromis_niloticus
ENSCGRG00000009807	Ythdc1	89	75.994	ENSOANG00000014398	YTHDC1	55	95.190	Ornithorhynchus_anatinus
ENSCGRG00000009807	Ythdc1	93	81.109	ENSOCUG00000015886	YTHDC1	57	95.477	Oryctolagus_cuniculus
ENSCGRG00000009807	Ythdc1	56	61.165	ENSORLG00000030544	ythdc1	60	66.747	Oryzias_latipes
ENSCGRG00000009807	Ythdc1	56	60.145	ENSORLG00020019316	ythdc1	60	66.747	Oryzias_latipes_hni
ENSCGRG00000009807	Ythdc1	56	61.275	ENSOMEG00000000551	ythdc1	93	54.217	Oryzias_melastigma
ENSCGRG00000009807	Ythdc1	99	96.797	ENSOGAG00000003362	YTHDC1	99	96.797	Otolemur_garnettii
ENSCGRG00000009807	Ythdc1	92	92.932	ENSOARG00000008633	YTHDC1	91	93.534	Ovis_aries
ENSCGRG00000009807	Ythdc1	99	97.286	ENSPPAG00000041315	YTHDC1	99	97.286	Pan_paniscus
ENSCGRG00000009807	Ythdc1	99	95.875	ENSPPRG00000011979	YTHDC1	99	95.875	Panthera_pardus
ENSCGRG00000009807	Ythdc1	99	94.643	ENSPTIG00000015527	YTHDC1	100	94.643	Panthera_tigris_altaica
ENSCGRG00000009807	Ythdc1	99	97.286	ENSPTRG00000016105	YTHDC1	99	97.286	Pan_troglodytes
ENSCGRG00000009807	Ythdc1	99	97.290	ENSPANG00000021590	YTHDC1	99	97.290	Papio_anubis
ENSCGRG00000009807	Ythdc1	92	68.000	ENSPKIG00000018497	ythdc1	91	68.483	Paramormyrops_kingsleyae
ENSCGRG00000009807	Ythdc1	92	86.767	ENSPSIG00000002782	YTHDC1	92	85.564	Pelodiscus_sinensis
ENSCGRG00000009807	Ythdc1	54	56.364	ENSPMGG00000000970	-	70	64.460	Periophthalmus_magnuspinnatus
ENSCGRG00000009807	Ythdc1	99	99.442	ENSPEMG00000013850	Ythdc1	100	99.442	Peromyscus_maniculatus_bairdii
ENSCGRG00000009807	Ythdc1	92	88.554	ENSPCIG00000006870	YTHDC1	91	87.801	Phascolarctos_cinereus
ENSCGRG00000009807	Ythdc1	57	59.318	ENSPFOG00000013404	ythdc1	60	65.385	Poecilia_formosa
ENSCGRG00000009807	Ythdc1	57	59.318	ENSPLAG00000011079	ythdc1	85	64.904	Poecilia_latipinna
ENSCGRG00000009807	Ythdc1	57	59.318	ENSPMEG00000009238	ythdc1	60	65.385	Poecilia_mexicana
ENSCGRG00000009807	Ythdc1	70	58.894	ENSPREG00000016973	ythdc1	91	49.555	Poecilia_reticulata
ENSCGRG00000009807	Ythdc1	87	97.468	ENSPPYG00000014726	YTHDC1	100	97.468	Pongo_abelii
ENSCGRG00000009807	Ythdc1	77	89.091	ENSPCAG00000009607	YTHDC1	75	88.636	Procavia_capensis
ENSCGRG00000009807	Ythdc1	92	89.009	ENSPCOG00000019105	YTHDC1	91	90.557	Propithecus_coquereli
ENSCGRG00000009807	Ythdc1	92	91.467	ENSPVAG00000015551	YTHDC1	91	91.317	Pteropus_vampyrus
ENSCGRG00000009807	Ythdc1	92	51.479	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSCGRG00000009807	Ythdc1	92	70.000	ENSPNAG00000028365	ythdc1	91	69.355	Pygocentrus_nattereri
ENSCGRG00000009807	Ythdc1	99	96.438	ENSRNOG00000001996	Ythdc1	99	96.438	Rattus_norvegicus
ENSCGRG00000009807	Ythdc1	99	95.048	ENSRBIG00000028279	YTHDC1	99	95.048	Rhinopithecus_bieti
ENSCGRG00000009807	Ythdc1	99	97.357	ENSRROG00000035028	YTHDC1	99	97.357	Rhinopithecus_roxellana
ENSCGRG00000009807	Ythdc1	99	97.290	ENSSBOG00000022353	YTHDC1	99	97.290	Saimiri_boliviensis_boliviensis
ENSCGRG00000009807	Ythdc1	93	88.438	ENSSHAG00000002538	YTHDC1	91	87.748	Sarcophilus_harrisii
ENSCGRG00000009807	Ythdc1	92	68.584	ENSSFOG00015003298	ythdc1	60	85.782	Scleropages_formosus
ENSCGRG00000009807	Ythdc1	57	60.090	ENSSMAG00000009086	ythdc1	92	53.592	Scophthalmus_maximus
ENSCGRG00000009807	Ythdc1	56	60.775	ENSSDUG00000022008	ythdc1	92	56.805	Seriola_dumerili
ENSCGRG00000009807	Ythdc1	56	60.775	ENSSLDG00000007926	ythdc1	59	67.048	Seriola_lalandi_dorsalis
ENSCGRG00000009807	Ythdc1	80	96.886	ENSSARG00000010960	YTHDC1	100	96.886	Sorex_araneus
ENSCGRG00000009807	Ythdc1	92	82.335	ENSSPUG00000009357	YTHDC1	93	82.663	Sphenodon_punctatus
ENSCGRG00000009807	Ythdc1	57	62.156	ENSSPAG00000011449	ythdc1	92	55.143	Stegastes_partitus
ENSCGRG00000009807	Ythdc1	100	93.878	ENSSSCG00000035505	YTHDC1	100	94.058	Sus_scrofa
ENSCGRG00000009807	Ythdc1	92	86.316	ENSTGUG00000004452	-	91	85.714	Taeniopygia_guttata
ENSCGRG00000009807	Ythdc1	63	65.116	ENSTRUG00000010142	ythdc1	70	66.667	Takifugu_rubripes
ENSCGRG00000009807	Ythdc1	86	59.870	ENSTNIG00000013243	ythdc1	88	65.581	Tetraodon_nigroviridis
ENSCGRG00000009807	Ythdc1	92	87.576	ENSTBEG00000011546	YTHDC1	91	87.424	Tupaia_belangeri
ENSCGRG00000009807	Ythdc1	92	92.654	ENSTTRG00000005083	YTHDC1	91	93.103	Tursiops_truncatus
ENSCGRG00000009807	Ythdc1	94	95.876	ENSUAMG00000010388	YTHDC1	100	95.876	Ursus_americanus
ENSCGRG00000009807	Ythdc1	99	82.917	ENSUMAG00000013668	YTHDC1	98	82.917	Ursus_maritimus
ENSCGRG00000009807	Ythdc1	99	96.286	ENSVPAG00000009040	YTHDC1	99	96.286	Vicugna_pacos
ENSCGRG00000009807	Ythdc1	99	94.665	ENSVVUG00000005387	YTHDC1	100	95.735	Vulpes_vulpes
ENSCGRG00000009807	Ythdc1	92	73.881	ENSXETG00000017960	ythdc1	91	74.030	Xenopus_tropicalis
ENSCGRG00000009807	Ythdc1	50	52.206	ENSXCOG00000000530	ythdc1	79	55.785	Xiphophorus_couchianus
ENSCGRG00000009807	Ythdc1	56	59.762	ENSXMAG00000005196	ythdc1	61	64.908	Xiphophorus_maculatus