EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000009849 (Gene tree)
Gene ID: -
Gene Symbol: Shq1
Alias: 2810403P18Rik|Grim-1
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 102860 bases
Position: chrJH000006.1:1532587-1635446
Accession: 100753163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000013579	SHQ1	PF04925.15	3.2e-69	1	1
ENSCGRP00000013580	SHQ1	PF04925.15	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000013789	-	1371	-	ENSCGRP00000013580	456 (aa)	-	-
ENSCGRT00000013788	-	3735	XM_003495203	ENSCGRP00000013579	567 (aa)	XP_003495251	G3GS48

Gene Model

Click here to download ENSCGRG00000009849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000009849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000009849	Shq1	100	84.016	ENSG00000144736	SHQ1	100	85.714	Homo_sapiens
ENSCGRG00000009849	Shq1	77	60.183	ENSAPOG00000000397	shq1	92	51.646	Acanthochromis_polyacanthus
ENSCGRG00000009849	Shq1	100	86.066	ENSAMEG00000015140	SHQ1	100	75.430	Ailuropoda_melanoleuca
ENSCGRG00000009849	Shq1	78	59.819	ENSACIG00000021249	shq1	72	60.271	Amphilophus_citrinellus
ENSCGRG00000009849	Shq1	77	61.327	ENSAOCG00000023311	shq1	76	58.368	Amphiprion_ocellaris
ENSCGRG00000009849	Shq1	77	61.098	ENSAPEG00000021686	shq1	70	61.098	Amphiprion_percula
ENSCGRG00000009849	Shq1	78	60.497	ENSATEG00000008475	shq1	72	60.948	Anabas_testudineus
ENSCGRG00000009849	Shq1	89	62.427	ENSAPLG00000013926	SHQ1	100	63.796	Anas_platyrhynchos
ENSCGRG00000009849	Shq1	96	67.532	ENSACAG00000014809	SHQ1	85	60.312	Anolis_carolinensis
ENSCGRG00000009849	Shq1	100	81.557	ENSANAG00000029241	SHQ1	100	75.820	Aotus_nancymaae
ENSCGRG00000009849	Shq1	96	59.712	ENSANAG00000030500	-	98	57.932	Aotus_nancymaae
ENSCGRG00000009849	Shq1	78	58.202	ENSACLG00000023077	shq1	74	55.368	Astatotilapia_calliptera
ENSCGRG00000009849	Shq1	76	54.398	ENSAMXG00000043822	shq1	78	53.524	Astyanax_mexicanus
ENSCGRG00000009849	Shq1	100	83.197	ENSBTAG00000005436	SHQ1	100	74.138	Bos_taurus
ENSCGRG00000009849	Shq1	76	32.658	WBGene00021655	Y48A5A.1	97	33.557	Caenorhabditis_elegans
ENSCGRG00000009849	Shq1	100	82.377	ENSCJAG00000015131	SHQ1	100	74.527	Callithrix_jacchus
ENSCGRG00000009849	Shq1	100	85.246	ENSCAFG00000006434	SHQ1	99	75.993	Canis_familiaris
ENSCGRG00000009849	Shq1	100	85.246	ENSCAFG00020016743	SHQ1	99	75.993	Canis_lupus_dingo
ENSCGRG00000009849	Shq1	100	82.787	ENSCHIG00000012271	SHQ1	91	75.172	Capra_hircus
ENSCGRG00000009849	Shq1	99	84.016	ENSTSYG00000014439	SHQ1	99	72.154	Carlito_syrichta
ENSCGRG00000009849	Shq1	82	82.099	ENSCAPG00000009343	SHQ1	96	88.312	Cavia_aperea
ENSCGRG00000009849	Shq1	98	84.426	ENSCPOG00000011443	SHQ1	99	73.711	Cavia_porcellus
ENSCGRG00000009849	Shq1	100	65.285	ENSCCAG00000027080	SHQ1	100	65.976	Cebus_capucinus
ENSCGRG00000009849	Shq1	96	60.320	ENSCCAG00000036087	-	97	58.719	Cebus_capucinus
ENSCGRG00000009849	Shq1	100	82.787	ENSCATG00000041238	SHQ1	100	75.043	Cercocebus_atys
ENSCGRG00000009849	Shq1	98	84.836	ENSCLAG00000004206	SHQ1	99	75.521	Chinchilla_lanigera
ENSCGRG00000009849	Shq1	80	78.065	ENSCSAG00000011514	SHQ1	100	72.358	Chlorocebus_sabaeus
ENSCGRG00000009849	Shq1	61	71.304	ENSCHOG00000003273	-	100	71.304	Choloepus_hoffmanni
ENSCGRG00000009849	Shq1	96	68.936	ENSCPBG00000006441	SHQ1	93	61.189	Chrysemys_picta_bellii
ENSCGRG00000009849	Shq1	68	50.000	ENSCING00000008013	-	96	40.940	Ciona_intestinalis
ENSCGRG00000009849	Shq1	63	60.465	ENSCSAVG00000002332	-	99	41.928	Ciona_savignyi
ENSCGRG00000009849	Shq1	99	82.787	ENSCANG00000039295	SHQ1	100	75.130	Colobus_angolensis_palliatus
ENSCGRG00000009849	Shq1	100	100.000	ENSCGRG00001012583	Shq1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000009849	Shq1	62	66.129	ENSCSEG00000007829	shq1	72	60.573	Cynoglossus_semilaevis
ENSCGRG00000009849	Shq1	77	60.412	ENSCVAG00000020049	shq1	92	52.536	Cyprinodon_variegatus
ENSCGRG00000009849	Shq1	77	58.810	ENSDARG00000058522	shq1	76	56.923	Danio_rerio
ENSCGRG00000009849	Shq1	100	84.836	ENSDNOG00000033937	SHQ1	100	73.875	Dasypus_novemcinctus
ENSCGRG00000009849	Shq1	96	84.158	ENSETEG00000005766	SHQ1	100	64.000	Echinops_telfairi
ENSCGRG00000009849	Shq1	69	58.209	ENSEBUG00000005445	shq1	99	45.759	Eptatretus_burgeri
ENSCGRG00000009849	Shq1	100	84.836	ENSEASG00005002237	SHQ1	100	76.511	Equus_asinus_asinus
ENSCGRG00000009849	Shq1	95	85.246	ENSECAG00000015673	SHQ1	94	77.978	Equus_caballus
ENSCGRG00000009849	Shq1	100	79.508	ENSEEUG00000010568	SHQ1	100	73.356	Erinaceus_europaeus
ENSCGRG00000009849	Shq1	73	60.145	ENSELUG00000003476	shq1	81	57.545	Esox_lucius
ENSCGRG00000009849	Shq1	100	85.656	ENSFCAG00000012781	SHQ1	100	77.003	Felis_catus
ENSCGRG00000009849	Shq1	98	68.443	ENSFALG00000013428	SHQ1	93	59.091	Ficedula_albicollis
ENSCGRG00000009849	Shq1	98	82.787	ENSFDAG00000005595	SHQ1	91	72.297	Fukomys_damarensis
ENSCGRG00000009849	Shq1	77	60.137	ENSFHEG00000017552	shq1	93	52.575	Fundulus_heteroclitus
ENSCGRG00000009849	Shq1	58	70.732	ENSGMOG00000007350	shq1	100	57.935	Gadus_morhua
ENSCGRG00000009849	Shq1	98	69.874	ENSGALG00000007798	SHQ1	93	58.813	Gallus_gallus
ENSCGRG00000009849	Shq1	58	73.171	ENSGACG00000011797	shq1	100	59.446	Gasterosteus_aculeatus
ENSCGRG00000009849	Shq1	100	83.197	ENSGGOG00000034818	SHQ1	100	74.699	Gorilla_gorilla
ENSCGRG00000009849	Shq1	78	57.978	ENSHBUG00000010857	shq1	73	58.744	Haplochromis_burtoni
ENSCGRG00000009849	Shq1	98	84.426	ENSHGLG00000003637	SHQ1	91	73.720	Heterocephalus_glaber_female
ENSCGRG00000009849	Shq1	98	84.426	ENSHGLG00100011957	SHQ1	91	73.973	Heterocephalus_glaber_male
ENSCGRG00000009849	Shq1	93	56.757	ENSHCOG00000010799	shq1	95	49.648	Hippocampus_comes
ENSCGRG00000009849	Shq1	77	59.193	ENSIPUG00000001247	shq1	75	59.417	Ictalurus_punctatus
ENSCGRG00000009849	Shq1	98	81.967	ENSSTOG00000010043	SHQ1	100	72.809	Ictidomys_tridecemlineatus
ENSCGRG00000009849	Shq1	100	85.656	ENSJJAG00000017611	Shq1	100	85.656	Jaculus_jaculus
ENSCGRG00000009849	Shq1	78	60.225	ENSKMAG00000004457	shq1	74	60.586	Kryptolebias_marmoratus
ENSCGRG00000009849	Shq1	80	65.044	ENSLACG00000014243	SHQ1	86	54.905	Latimeria_chalumnae
ENSCGRG00000009849	Shq1	95	61.842	ENSLOCG00000009970	shq1	98	54.101	Lepisosteus_oculatus
ENSCGRG00000009849	Shq1	98	56.483	ENSMFAG00000037396	-	98	56.483	Macaca_fascicularis
ENSCGRG00000009849	Shq1	100	83.197	ENSMFAG00000039148	SHQ1	100	75.043	Macaca_fascicularis
ENSCGRG00000009849	Shq1	89	82.653	ENSMMUG00000009571	SHQ1	96	74.109	Macaca_mulatta
ENSCGRG00000009849	Shq1	98	56.306	ENSMMUG00000021761	-	98	56.306	Macaca_mulatta
ENSCGRG00000009849	Shq1	100	83.197	ENSMNEG00000032667	SHQ1	100	75.043	Macaca_nemestrina
ENSCGRG00000009849	Shq1	100	82.787	ENSMLEG00000038493	SHQ1	100	75.043	Mandrillus_leucophaeus
ENSCGRG00000009849	Shq1	78	60.314	ENSMAMG00000023432	shq1	71	58.672	Mastacembelus_armatus
ENSCGRG00000009849	Shq1	78	58.202	ENSMZEG00005008649	shq1	73	58.969	Maylandia_zebra
ENSCGRG00000009849	Shq1	98	68.750	ENSMGAG00000009640	SHQ1	93	57.317	Meleagris_gallopavo
ENSCGRG00000009849	Shq1	100	96.721	ENSMAUG00000022030	Shq1	100	96.721	Mesocricetus_auratus
ENSCGRG00000009849	Shq1	98	84.082	ENSMICG00000009224	SHQ1	98	75.910	Microcebus_murinus
ENSCGRG00000009849	Shq1	100	93.852	ENSMOCG00000017836	Shq1	100	93.852	Microtus_ochrogaster
ENSCGRG00000009849	Shq1	77	59.310	ENSMMOG00000010569	shq1	76	57.395	Mola_mola
ENSCGRG00000009849	Shq1	84	68.828	ENSMODG00000003926	SHQ1	78	72.769	Monodelphis_domestica
ENSCGRG00000009849	Shq1	77	60.959	ENSMALG00000008870	shq1	72	61.644	Monopterus_albus
ENSCGRG00000009849	Shq1	100	94.672	MGP_CAROLIEiJ_G0028689	Shq1	100	94.672	Mus_caroli
ENSCGRG00000009849	Shq1	100	94.262	ENSMUSG00000035378	Shq1	100	94.262	Mus_musculus
ENSCGRG00000009849	Shq1	100	93.443	MGP_PahariEiJ_G0022440	Shq1	100	93.443	Mus_pahari
ENSCGRG00000009849	Shq1	100	93.443	MGP_SPRETEiJ_G0029717	Shq1	100	93.443	Mus_spretus
ENSCGRG00000009849	Shq1	100	83.197	ENSMPUG00000017006	SHQ1	98	75.043	Mustela_putorius_furo
ENSCGRG00000009849	Shq1	88	76.606	ENSMLUG00000013539	SHQ1	98	70.286	Myotis_lucifugus
ENSCGRG00000009849	Shq1	98	74.468	ENSNGAG00000023317	Shq1	99	74.291	Nannospalax_galili
ENSCGRG00000009849	Shq1	62	57.022	ENSNBRG00000024004	shq1	68	57.983	Neolamprologus_brichardi
ENSCGRG00000009849	Shq1	98	84.836	ENSNLEG00000002731	SHQ1	98	76.842	Nomascus_leucogenys
ENSCGRG00000009849	Shq1	82	65.741	ENSMEUG00000009350	-	89	65.741	Notamacropus_eugenii
ENSCGRG00000009849	Shq1	97	82.773	ENSODEG00000009192	SHQ1	98	82.773	Octodon_degus
ENSCGRG00000009849	Shq1	78	57.978	ENSONIG00000020264	shq1	73	58.744	Oreochromis_niloticus
ENSCGRG00000009849	Shq1	99	83.128	ENSOCUG00000016695	SHQ1	99	73.891	Oryctolagus_cuniculus
ENSCGRG00000009849	Shq1	76	60.185	ENSORLG00000023538	shq1	78	60.321	Oryzias_latipes
ENSCGRG00000009849	Shq1	76	60.185	ENSORLG00020003697	shq1	77	60.321	Oryzias_latipes_hni
ENSCGRG00000009849	Shq1	76	60.185	ENSORLG00015021040	shq1	86	56.576	Oryzias_latipes_hsok
ENSCGRG00000009849	Shq1	76	60.880	ENSOMEG00000001225	shq1	78	60.181	Oryzias_melastigma
ENSCGRG00000009849	Shq1	98	83.401	ENSOGAG00000003898	SHQ1	100	74.564	Otolemur_garnettii
ENSCGRG00000009849	Shq1	100	81.707	ENSOARG00000009547	SHQ1	100	73.846	Ovis_aries
ENSCGRG00000009849	Shq1	98	58.160	ENSPPAG00000043263	-	98	57.118	Pan_paniscus
ENSCGRG00000009849	Shq1	100	84.016	ENSPPAG00000027714	SHQ1	100	75.043	Pan_paniscus
ENSCGRG00000009849	Shq1	100	85.656	ENSPPRG00000004769	SHQ1	100	75.302	Panthera_pardus
ENSCGRG00000009849	Shq1	98	78.632	ENSPTIG00000011478	SHQ1	100	70.984	Panthera_tigris_altaica
ENSCGRG00000009849	Shq1	98	57.465	ENSPTRG00000048303	-	98	56.424	Pan_troglodytes
ENSCGRG00000009849	Shq1	100	84.016	ENSPTRG00000015106	SHQ1	100	75.043	Pan_troglodytes
ENSCGRG00000009849	Shq1	100	81.967	ENSPANG00000002881	SHQ1	100	75.559	Papio_anubis
ENSCGRG00000009849	Shq1	76	58.042	ENSPKIG00000021517	shq1	77	57.273	Paramormyrops_kingsleyae
ENSCGRG00000009849	Shq1	96	68.487	ENSPSIG00000005536	SHQ1	93	61.713	Pelodiscus_sinensis
ENSCGRG00000009849	Shq1	78	57.528	ENSPMGG00000008838	shq1	76	57.489	Periophthalmus_magnuspinnatus
ENSCGRG00000009849	Shq1	100	94.672	ENSPEMG00000000251	Shq1	100	94.672	Peromyscus_maniculatus_bairdii
ENSCGRG00000009849	Shq1	78	56.152	ENSPMAG00000005372	shq1	99	56.376	Petromyzon_marinus
ENSCGRG00000009849	Shq1	77	58.542	ENSPFOG00000003118	shq1	79	59.226	Poecilia_formosa
ENSCGRG00000009849	Shq1	61	56.897	ENSPMEG00000011076	shq1	75	58.046	Poecilia_mexicana
ENSCGRG00000009849	Shq1	68	57.513	ENSPREG00000000591	shq1	73	57.692	Poecilia_reticulata
ENSCGRG00000009849	Shq1	100	82.377	ENSPPYG00000013717	SHQ1	100	74.699	Pongo_abelii
ENSCGRG00000009849	Shq1	95	82.787	ENSPCAG00000009035	SHQ1	99	74.035	Procavia_capensis
ENSCGRG00000009849	Shq1	99	82.996	ENSPCOG00000008415	SHQ1	99	75.256	Propithecus_coquereli
ENSCGRG00000009849	Shq1	100	82.787	ENSPVAG00000017392	SHQ1	100	75.648	Pteropus_vampyrus
ENSCGRG00000009849	Shq1	78	58.202	ENSPNYG00000003878	shq1	72	58.969	Pundamilia_nyererei
ENSCGRG00000009849	Shq1	76	58.756	ENSPNAG00000026840	shq1	71	58.824	Pygocentrus_nattereri
ENSCGRG00000009849	Shq1	100	93.852	ENSRNOG00000005433	Shq1	91	93.852	Rattus_norvegicus
ENSCGRG00000009849	Shq1	99	77.200	ENSRBIG00000026280	SHQ1	100	71.354	Rhinopithecus_bieti
ENSCGRG00000009849	Shq1	99	82.787	ENSRROG00000034126	SHQ1	100	74.957	Rhinopithecus_roxellana
ENSCGRG00000009849	Shq1	99	66.379	ENSSBOG00000021038	SHQ1	99	67.414	Saimiri_boliviensis_boliviensis
ENSCGRG00000009849	Shq1	93	71.667	ENSSHAG00000015077	SHQ1	97	62.862	Sarcophilus_harrisii
ENSCGRG00000009849	Shq1	67	72.500	ENSSFOG00015016241	shq1	78	62.299	Scleropages_formosus
ENSCGRG00000009849	Shq1	78	61.712	ENSSMAG00000016151	shq1	72	62.162	Scophthalmus_maximus
ENSCGRG00000009849	Shq1	76	61.290	ENSSDUG00000011986	shq1	71	61.905	Seriola_dumerili
ENSCGRG00000009849	Shq1	73	61.111	ENSSLDG00000013908	shq1	71	61.364	Seriola_lalandi_dorsalis
ENSCGRG00000009849	Shq1	98	66.019	ENSSARG00000007119	SHQ1	98	61.620	Sorex_araneus
ENSCGRG00000009849	Shq1	78	68.421	ENSSPUG00000011526	-	90	57.851	Sphenodon_punctatus
ENSCGRG00000009849	Shq1	98	80.738	ENSSSCG00000011518	SHQ1	90	80.738	Sus_scrofa
ENSCGRG00000009849	Shq1	98	68.016	ENSTGUG00000009933	SHQ1	99	58.752	Taeniopygia_guttata
ENSCGRG00000009849	Shq1	66	66.102	ENSTRUG00000009446	shq1	76	56.455	Takifugu_rubripes
ENSCGRG00000009849	Shq1	73	55.529	ENSTNIG00000007354	shq1	95	56.036	Tetraodon_nigroviridis
ENSCGRG00000009849	Shq1	74	87.234	ENSTBEG00000011295	SHQ1	80	87.234	Tupaia_belangeri
ENSCGRG00000009849	Shq1	96	82.787	ENSTTRG00000005320	SHQ1	98	76.596	Tursiops_truncatus
ENSCGRG00000009849	Shq1	98	75.575	ENSUMAG00000024031	SHQ1	97	74.867	Ursus_maritimus
ENSCGRG00000009849	Shq1	92	63.670	ENSVPAG00000004880	SHQ1	100	64.419	Vicugna_pacos
ENSCGRG00000009849	Shq1	100	85.246	ENSVVUG00000013906	SHQ1	99	75.820	Vulpes_vulpes
ENSCGRG00000009849	Shq1	77	65.675	ENSXETG00000032215	shq1	71	65.675	Xenopus_tropicalis