EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000010806 (Gene tree)
Gene ID: -
Gene Symbol: Trub1
Alias: 2610009I02Rik|9030425C13Rik
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 51305 bases
Position: chrJH002264.1:95093-146397
Accession: 100754275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000014908	TruB_N	PF01509.18	1.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000015128	-	4512	XM_003513289	ENSCGRP00000014908	327 (aa)	XP_003513337	G3IET4

Gene Model

Click here to download ENSCGRG00000010806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000010806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000010806	Trub1	60	31.658	ENSCGRG00000005633	Trub2	63	31.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000010806	Trub1	99	78.223	ENSG00000165832	TRUB1	80	88.214	Homo_sapiens
ENSCGRG00000010806	Trub1	75	68.163	ENSAPOG00000020565	trub1	89	68.033	Acanthochromis_polyacanthus
ENSCGRG00000010806	Trub1	91	86.622	ENSAMEG00000014931	TRUB1	80	87.234	Ailuropoda_melanoleuca
ENSCGRG00000010806	Trub1	75	61.789	ENSACIG00000003060	trub1	80	62.762	Amphilophus_citrinellus
ENSCGRG00000010806	Trub1	75	68.163	ENSAOCG00000017188	trub1	87	69.038	Amphiprion_ocellaris
ENSCGRG00000010806	Trub1	75	67.480	ENSAPEG00000015209	trub1	87	68.619	Amphiprion_percula
ENSCGRG00000010806	Trub1	74	67.769	ENSATEG00000023291	trub1	84	67.660	Anabas_testudineus
ENSCGRG00000010806	Trub1	84	73.818	ENSAPLG00000006808	TRUB1	95	74.242	Anas_platyrhynchos
ENSCGRG00000010806	Trub1	83	70.111	ENSACAG00000009282	TRUB1	94	70.115	Anolis_carolinensis
ENSCGRG00000010806	Trub1	91	88.514	ENSANAG00000022870	TRUB1	79	89.247	Aotus_nancymaae
ENSCGRG00000010806	Trub1	77	65.873	ENSACLG00000000823	trub1	88	66.939	Astatotilapia_calliptera
ENSCGRG00000010806	Trub1	81	64.662	ENSAMXG00000015845	trub1	87	65.251	Astyanax_mexicanus
ENSCGRG00000010806	Trub1	91	86.242	ENSBTAG00000012955	TRUB1	80	87.189	Bos_taurus
ENSCGRG00000010806	Trub1	91	88.552	ENSCJAG00000047815	TRUB1	80	89.286	Callithrix_jacchus
ENSCGRG00000010806	Trub1	91	88.294	ENSCAFG00000011688	TRUB1	80	89.286	Canis_familiaris
ENSCGRG00000010806	Trub1	91	88.294	ENSCAFG00020013237	TRUB1	80	89.286	Canis_lupus_dingo
ENSCGRG00000010806	Trub1	91	86.913	ENSCHIG00000020884	TRUB1	84	87.900	Capra_hircus
ENSCGRG00000010806	Trub1	91	87.879	ENSTSYG00000000446	TRUB1	80	88.929	Carlito_syrichta
ENSCGRG00000010806	Trub1	77	77.470	ENSCAPG00000017088	TRUB1	99	77.470	Cavia_aperea
ENSCGRG00000010806	Trub1	59	87.565	ENSCPOG00000040236	-	72	90.341	Cavia_porcellus
ENSCGRG00000010806	Trub1	69	81.858	ENSCPOG00000030129	-	70	89.944	Cavia_porcellus
ENSCGRG00000010806	Trub1	91	88.215	ENSCCAG00000028842	TRUB1	80	88.929	Cebus_capucinus
ENSCGRG00000010806	Trub1	91	88.215	ENSCATG00000033431	TRUB1	80	88.929	Cercocebus_atys
ENSCGRG00000010806	Trub1	59	88.601	ENSCLAG00000008664	TRUB1	72	90.341	Chinchilla_lanigera
ENSCGRG00000010806	Trub1	91	88.215	ENSCSAG00000004891	TRUB1	80	88.929	Chlorocebus_sabaeus
ENSCGRG00000010806	Trub1	91	72.148	ENSCHOG00000011931	TRUB1	80	71.886	Choloepus_hoffmanni
ENSCGRG00000010806	Trub1	83	76.103	ENSCPBG00000003051	TRUB1	91	75.379	Chrysemys_picta_bellii
ENSCGRG00000010806	Trub1	91	88.215	ENSCANG00000029445	TRUB1	80	88.929	Colobus_angolensis_palliatus
ENSCGRG00000010806	Trub1	100	92.049	ENSCGRG00001016772	-	100	92.049	Cricetulus_griseus_chok1gshd
ENSCGRG00000010806	Trub1	86	88.968	ENSCGRG00001010322	-	86	81.957	Cricetulus_griseus_chok1gshd
ENSCGRG00000010806	Trub1	75	64.490	ENSCSEG00000011261	trub1	92	58.657	Cynoglossus_semilaevis
ENSCGRG00000010806	Trub1	75	67.480	ENSCVAG00000008791	trub1	73	67.364	Cyprinodon_variegatus
ENSCGRG00000010806	Trub1	85	63.929	ENSDARG00000053805	trub1	90	64.103	Danio_rerio
ENSCGRG00000010806	Trub1	90	83.390	ENSDNOG00000001069	TRUB1	80	83.630	Dasypus_novemcinctus
ENSCGRG00000010806	Trub1	98	83.540	ENSDORG00000010431	Trub1	81	88.256	Dipodomys_ordii
ENSCGRG00000010806	Trub1	69	88.028	ENSETEG00000009183	TRUB1	60	90.769	Echinops_telfairi
ENSCGRG00000010806	Trub1	91	87.248	ENSEASG00005014739	TRUB1	80	87.900	Equus_asinus_asinus
ENSCGRG00000010806	Trub1	91	87.248	ENSECAG00000007177	TRUB1	80	87.900	Equus_caballus
ENSCGRG00000010806	Trub1	90	75.510	ENSEEUG00000013993	TRUB1	78	74.733	Erinaceus_europaeus
ENSCGRG00000010806	Trub1	75	68.163	ENSELUG00000000502	trub1	83	68.908	Esox_lucius
ENSCGRG00000010806	Trub1	91	88.514	ENSFCAG00000031927	TRUB1	80	89.247	Felis_catus
ENSCGRG00000010806	Trub1	73	76.050	ENSFALG00000002232	TRUB1	91	76.050	Ficedula_albicollis
ENSCGRG00000010806	Trub1	59	89.637	ENSFDAG00000008140	TRUB1	72	91.477	Fukomys_damarensis
ENSCGRG00000010806	Trub1	83	61.624	ENSFHEG00000004016	trub1	90	61.742	Fundulus_heteroclitus
ENSCGRG00000010806	Trub1	83	73.529	ENSGALG00000009091	TRUB1	95	72.947	Gallus_gallus
ENSCGRG00000010806	Trub1	74	63.525	ENSGAFG00000009193	trub1	83	63.713	Gambusia_affinis
ENSCGRG00000010806	Trub1	61	66.332	ENSGACG00000015387	trub1	98	66.332	Gasterosteus_aculeatus
ENSCGRG00000010806	Trub1	90	71.525	ENSGAGG00000009758	TRUB1	75	76.136	Gopherus_agassizii
ENSCGRG00000010806	Trub1	91	87.542	ENSGGOG00000004583	TRUB1	80	88.214	Gorilla_gorilla
ENSCGRG00000010806	Trub1	77	65.873	ENSHBUG00000016787	trub1	88	66.939	Haplochromis_burtoni
ENSCGRG00000010806	Trub1	91	83.557	ENSHGLG00000015314	TRUB1	81	84.342	Heterocephalus_glaber_female
ENSCGRG00000010806	Trub1	59	88.083	ENSHGLG00100009183	TRUB1	74	89.773	Heterocephalus_glaber_male
ENSCGRG00000010806	Trub1	81	63.774	ENSHCOG00000017877	trub1	89	63.953	Hippocampus_comes
ENSCGRG00000010806	Trub1	81	65.283	ENSIPUG00000017559	trub1	91	65.251	Ictalurus_punctatus
ENSCGRG00000010806	Trub1	91	85.906	ENSSTOG00000003641	TRUB1	84	86.833	Ictidomys_tridecemlineatus
ENSCGRG00000010806	Trub1	100	79.706	ENSJJAG00000011800	Trub1	83	86.477	Jaculus_jaculus
ENSCGRG00000010806	Trub1	77	64.591	ENSKMAG00000006232	trub1	90	65.200	Kryptolebias_marmoratus
ENSCGRG00000010806	Trub1	79	63.774	ENSLBEG00000026722	trub1	90	64.341	Labrus_bergylta
ENSCGRG00000010806	Trub1	85	71.223	ENSLACG00000014885	TRUB1	86	73.256	Latimeria_chalumnae
ENSCGRG00000010806	Trub1	81	70.189	ENSLOCG00000012979	trub1	86	70.472	Lepisosteus_oculatus
ENSCGRG00000010806	Trub1	90	80.667	ENSLAFG00000015452	TRUB1	82	82.578	Loxodonta_africana
ENSCGRG00000010806	Trub1	91	87.879	ENSMFAG00000031767	TRUB1	80	88.571	Macaca_fascicularis
ENSCGRG00000010806	Trub1	91	88.215	ENSMMUG00000001902	TRUB1	80	88.929	Macaca_mulatta
ENSCGRG00000010806	Trub1	91	83.165	ENSMNEG00000044646	TRUB1	79	83.571	Macaca_nemestrina
ENSCGRG00000010806	Trub1	91	88.215	ENSMLEG00000042655	TRUB1	80	88.929	Mandrillus_leucophaeus
ENSCGRG00000010806	Trub1	77	65.873	ENSMZEG00005024095	trub1	88	66.939	Maylandia_zebra
ENSCGRG00000010806	Trub1	83	73.162	ENSMGAG00000011135	TRUB1	91	73.106	Meleagris_gallopavo
ENSCGRG00000010806	Trub1	91	94.966	ENSMAUG00000011101	Trub1	100	84.320	Mesocricetus_auratus
ENSCGRG00000010806	Trub1	91	87.584	ENSMICG00000016324	TRUB1	81	88.256	Microcebus_murinus
ENSCGRG00000010806	Trub1	100	89.728	ENSMOCG00000017759	Trub1	100	86.103	Microtus_ochrogaster
ENSCGRG00000010806	Trub1	87	80.420	ENSMODG00000009676	TRUB1	77	80.000	Monodelphis_domestica
ENSCGRG00000010806	Trub1	100	83.136	MGP_CAROLIEiJ_G0023100	Trub1	100	81.657	Mus_caroli
ENSCGRG00000010806	Trub1	100	82.544	ENSMUSG00000025086	Trub1	100	81.361	Mus_musculus
ENSCGRG00000010806	Trub1	100	83.728	MGP_PahariEiJ_G0014588	Trub1	100	82.544	Mus_pahari
ENSCGRG00000010806	Trub1	100	82.840	MGP_SPRETEiJ_G0024021	Trub1	100	81.657	Mus_spretus
ENSCGRG00000010806	Trub1	91	88.889	ENSMPUG00000003556	TRUB1	80	89.643	Mustela_putorius_furo
ENSCGRG00000010806	Trub1	91	86.957	ENSMLUG00000017686	TRUB1	82	87.857	Myotis_lucifugus
ENSCGRG00000010806	Trub1	100	80.460	ENSNGAG00000018682	Trub1	81	89.680	Nannospalax_galili
ENSCGRG00000010806	Trub1	75	67.073	ENSNBRG00000023393	trub1	85	68.201	Neolamprologus_brichardi
ENSCGRG00000010806	Trub1	91	87.205	ENSNLEG00000016345	TRUB1	80	87.857	Nomascus_leucogenys
ENSCGRG00000010806	Trub1	61	87.065	ENSMEUG00000006603	TRUB1	72	86.667	Notamacropus_eugenii
ENSCGRG00000010806	Trub1	91	82.215	ENSOPRG00000009371	TRUB1	82	83.274	Ochotona_princeps
ENSCGRG00000010806	Trub1	91	82.550	ENSODEG00000010854	TRUB1	81	83.630	Octodon_degus
ENSCGRG00000010806	Trub1	75	66.667	ENSONIG00000007249	trub1	87	67.782	Oreochromis_niloticus
ENSCGRG00000010806	Trub1	84	77.372	ENSOANG00000001556	TRUB1	87	77.273	Ornithorhynchus_anatinus
ENSCGRG00000010806	Trub1	91	82.215	ENSOCUG00000009456	TRUB1	81	82.562	Oryctolagus_cuniculus
ENSCGRG00000010806	Trub1	74	67.769	ENSORLG00000029719	trub1	84	68.085	Oryzias_latipes
ENSCGRG00000010806	Trub1	74	67.355	ENSORLG00020016767	trub1	83	67.660	Oryzias_latipes_hni
ENSCGRG00000010806	Trub1	74	67.769	ENSORLG00015014728	trub1	84	68.511	Oryzias_latipes_hsok
ENSCGRG00000010806	Trub1	74	67.901	ENSOMEG00000014556	trub1	83	67.797	Oryzias_melastigma
ENSCGRG00000010806	Trub1	91	88.255	ENSOGAG00000015895	TRUB1	80	88.968	Otolemur_garnettii
ENSCGRG00000010806	Trub1	91	84.818	ENSOARG00000015591	TRUB1	82	85.417	Ovis_aries
ENSCGRG00000010806	Trub1	99	78.223	ENSPPAG00000043645	TRUB1	80	88.214	Pan_paniscus
ENSCGRG00000010806	Trub1	91	88.176	ENSPPRG00000007096	TRUB1	80	88.889	Panthera_pardus
ENSCGRG00000010806	Trub1	91	88.514	ENSPTIG00000006378	TRUB1	80	89.247	Panthera_tigris_altaica
ENSCGRG00000010806	Trub1	99	78.223	ENSPTRG00000002964	TRUB1	80	88.214	Pan_troglodytes
ENSCGRG00000010806	Trub1	91	88.215	ENSPANG00000020712	TRUB1	80	88.929	Papio_anubis
ENSCGRG00000010806	Trub1	51	69.461	ENSPKIG00000003852	trub1	72	69.461	Paramormyrops_kingsleyae
ENSCGRG00000010806	Trub1	83	73.529	ENSPSIG00000012877	TRUB1	91	73.106	Pelodiscus_sinensis
ENSCGRG00000010806	Trub1	78	64.961	ENSPMGG00000000075	trub1	86	67.227	Periophthalmus_magnuspinnatus
ENSCGRG00000010806	Trub1	100	84.706	ENSPEMG00000011156	Trub1	83	92.883	Peromyscus_maniculatus_bairdii
ENSCGRG00000010806	Trub1	87	80.634	ENSPCIG00000009729	TRUB1	75	80.216	Phascolarctos_cinereus
ENSCGRG00000010806	Trub1	80	63.077	ENSPFOG00000009950	trub1	87	65.126	Poecilia_formosa
ENSCGRG00000010806	Trub1	81	62.264	ENSPLAG00000013855	trub1	84	65.126	Poecilia_latipinna
ENSCGRG00000010806	Trub1	81	62.264	ENSPMEG00000009064	trub1	86	65.126	Poecilia_mexicana
ENSCGRG00000010806	Trub1	81	63.396	ENSPREG00000003343	trub1	86	65.966	Poecilia_reticulata
ENSCGRG00000010806	Trub1	91	87.205	ENSPPYG00000002676	TRUB1	80	87.857	Pongo_abelii
ENSCGRG00000010806	Trub1	90	76.792	ENSPCAG00000008427	TRUB1	79	77.500	Procavia_capensis
ENSCGRG00000010806	Trub1	91	81.544	ENSPCOG00000024360	TRUB1	79	81.851	Propithecus_coquereli
ENSCGRG00000010806	Trub1	65	91.509	ENSPVAG00000007575	TRUB1	74	92.821	Pteropus_vampyrus
ENSCGRG00000010806	Trub1	77	65.873	ENSPNYG00000018614	trub1	88	66.939	Pundamilia_nyererei
ENSCGRG00000010806	Trub1	75	61.066	ENSPNAG00000006881	trub1	76	60.924	Pygocentrus_nattereri
ENSCGRG00000010806	Trub1	100	83.284	ENSRNOG00000017321	Trub1	82	89.680	Rattus_norvegicus
ENSCGRG00000010806	Trub1	91	77.441	ENSRBIG00000033423	TRUB1	78	77.500	Rhinopithecus_bieti
ENSCGRG00000010806	Trub1	91	88.215	ENSRROG00000033902	TRUB1	80	88.929	Rhinopithecus_roxellana
ENSCGRG00000010806	Trub1	91	88.215	ENSSBOG00000024237	TRUB1	80	88.929	Saimiri_boliviensis_boliviensis
ENSCGRG00000010806	Trub1	78	78.125	ENSSHAG00000009346	TRUB1	86	78.125	Sarcophilus_harrisii
ENSCGRG00000010806	Trub1	79	66.795	ENSSFOG00015022124	trub1	81	69.492	Scleropages_formosus
ENSCGRG00000010806	Trub1	75	67.073	ENSSMAG00000001020	trub1	85	67.782	Scophthalmus_maximus
ENSCGRG00000010806	Trub1	73	67.917	ENSSDUG00000016414	trub1	86	68.201	Seriola_dumerili
ENSCGRG00000010806	Trub1	73	68.333	ENSSLDG00000015486	trub1	86	68.619	Seriola_lalandi_dorsalis
ENSCGRG00000010806	Trub1	86	74.643	ENSSPUG00000001642	TRUB1	91	76.136	Sphenodon_punctatus
ENSCGRG00000010806	Trub1	79	66.409	ENSSPAG00000001217	trub1	90	67.063	Stegastes_partitus
ENSCGRG00000010806	Trub1	91	84.564	ENSSSCG00000010653	TRUB1	80	86.121	Sus_scrofa
ENSCGRG00000010806	Trub1	83	75.185	ENSTGUG00000010971	TRUB1	94	75.758	Taeniopygia_guttata
ENSCGRG00000010806	Trub1	77	73.518	ENSTBEG00000002880	TRUB1	99	73.518	Tupaia_belangeri
ENSCGRG00000010806	Trub1	65	89.623	ENSTTRG00000005767	TRUB1	74	91.282	Tursiops_truncatus
ENSCGRG00000010806	Trub1	91	88.889	ENSUAMG00000024876	TRUB1	80	89.643	Ursus_americanus
ENSCGRG00000010806	Trub1	90	88.814	ENSUMAG00000002411	TRUB1	83	89.286	Ursus_maritimus
ENSCGRG00000010806	Trub1	91	87.248	ENSVPAG00000005507	TRUB1	80	88.256	Vicugna_pacos
ENSCGRG00000010806	Trub1	91	88.851	ENSVVUG00000010085	TRUB1	67	89.286	Vulpes_vulpes
ENSCGRG00000010806	Trub1	83	64.338	ENSXETG00000023828	trub1	95	64.394	Xenopus_tropicalis
ENSCGRG00000010806	Trub1	79	62.016	ENSXCOG00000017847	trub1	83	63.983	Xiphophorus_couchianus
ENSCGRG00000010806	Trub1	81	61.509	ENSXMAG00000014701	trub1	86	64.286	Xiphophorus_maculatus