EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00000011102 (Gene tree)
Gene ID
-
Gene Symbol
Pabpn1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Cricetulus_griseus_crigri
Status
putative
Strand
Plus strand
Length
17837 bases
Position
chrJH000634.1:948936-966772
Accession
100771019
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00000015294RRM_1PF00076.221.9e-1511
ENSCGRP00000015293RRM_1PF00076.222.5e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00000015522-483-ENSCGRP00000015294161 (aa)--
ENSCGRT00000015521-3930XM_007646592ENSCGRP00000015293178 (aa)XP_007644782-
Gene Model
Click here to download ENSCGRG00000011102's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000011102's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00000011102Pabpn18956.209ENSCGRG00000015868Pabpn1l5156.849
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00000011102Pabpn110099.438ENSG00000100836PABPN110099.438Homo_sapiens
ENSCGRG00000011102Pabpn110099.438ENSG00000258643BCL2L2-PABPN15399.438Homo_sapiens
ENSCGRG00000011102Pabpn19191.156ENSAPOG00000016425pabpn16391.156Acanthochromis_polyacanthus
ENSCGRG00000011102Pabpn110099.438ENSAMEG00000007048BCL2L2-PABPN19499.438Ailuropoda_melanoleuca
ENSCGRG00000011102Pabpn19389.333ENSACIG00000021744pabpn19481.548Amphilophus_citrinellus
ENSCGRG00000011102Pabpn19191.156ENSAOCG00000015805pabpn16391.156Amphiprion_ocellaris
ENSCGRG00000011102Pabpn19191.156ENSAPEG00000009623pabpn16391.156Amphiprion_percula
ENSCGRG00000011102Pabpn19191.156ENSATEG00000020531pabpn16391.156Anabas_testudineus
ENSCGRG00000011102Pabpn19197.959ENSACAG00000006185-6092.262Anolis_carolinensis
ENSCGRG00000011102Pabpn110099.438ENSANAG00000024513-6499.438Aotus_nancymaae
ENSCGRG00000011102Pabpn19388.742ENSACLG00000016374pabpn15288.742Astatotilapia_calliptera
ENSCGRG00000011102Pabpn19192.517ENSAMXG00000000452pabpn19483.333Astyanax_mexicanus
ENSCGRG00000011102Pabpn19198.639ENSBTAG00000050594-5898.639Bos_taurus
ENSCGRG00000011102Pabpn110097.753ENSBTAG00000053753-6697.753Bos_taurus
ENSCGRG00000011102Pabpn110099.438ENSBTAG00000006884PABPN15899.438Bos_taurus
ENSCGRG00000011102Pabpn18860.839WBGene00003904pabp-27955.357Caenorhabditis_elegans
ENSCGRG00000011102Pabpn110097.753ENSCJAG00000004407-8997.753Callithrix_jacchus
ENSCGRG00000011102Pabpn110099.438ENSCJAG00000007960-6699.438Callithrix_jacchus
ENSCGRG00000011102Pabpn110099.438ENSCAFG00000011482PABPN15899.438Canis_familiaris
ENSCGRG00000011102Pabpn110099.438ENSCAFG00020007298-5899.438Canis_lupus_dingo
ENSCGRG00000011102Pabpn110099.438ENSCAFG00020006651-5899.438Canis_lupus_dingo
ENSCGRG00000011102Pabpn110099.438ENSCHIG00000012184PABPN15899.438Capra_hircus
ENSCGRG00000011102Pabpn110099.438ENSTSYG00000033996BCL2L2-PABPN110099.438Carlito_syrichta
ENSCGRG00000011102Pabpn17898.551ENSCAPG00000009461-9998.551Cavia_aperea
ENSCGRG00000011102Pabpn110098.876ENSCPOG00000025574PABPN15898.876Cavia_porcellus
ENSCGRG00000011102Pabpn110099.438ENSCCAG00000033954BCL2L2-PABPN16699.438Cebus_capucinus
ENSCGRG00000011102Pabpn110099.438ENSCATG00000038536BCL2L2-PABPN16699.438Cercocebus_atys
ENSCGRG00000011102Pabpn18597.368ENSCLAG00000012423PABPN15797.368Chinchilla_lanigera
ENSCGRG00000011102Pabpn110098.315ENSCSAG00000016036PABPN15898.315Chlorocebus_sabaeus
ENSCGRG00000011102Pabpn19490.419ENSCHOG00000004798BCL2L2-PABPN17290.419Choloepus_hoffmanni
ENSCGRG00000011102Pabpn19493.413ENSCPBG00000026060-9493.413Chrysemys_picta_bellii
ENSCGRG00000011102Pabpn110061.798ENSCING00000012468-6471.918Ciona_intestinalis
ENSCGRG00000011102Pabpn110060.112ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSCGRG00000011102Pabpn19486.826ENSCANG00000030980-5983.832Colobus_angolensis_palliatus
ENSCGRG00000011102Pabpn110099.438ENSCANG00000009750BCL2L2-PABPN110099.438Colobus_angolensis_palliatus
ENSCGRG00000011102Pabpn1100100.000ENSCGRG00001019696Pabpn1100100.000Cricetulus_griseus_chok1gshd
ENSCGRG00000011102Pabpn19190.476ENSCSEG00000008774pabpn16390.476Cynoglossus_semilaevis
ENSCGRG00000011102Pabpn19091.034ENSCVAG00000003152pabpn16290.476Cyprinodon_variegatus
ENSCGRG00000011102Pabpn18861.268ENSDARG00000087996pabpn1l7266.387Danio_rerio
ENSCGRG00000011102Pabpn19191.837ENSDARG00000045373pabpn16691.837Danio_rerio
ENSCGRG00000011102Pabpn110099.438ENSDNOG00000023682PABPN15899.438Dasypus_novemcinctus
ENSCGRG00000011102Pabpn18390.977ENSDORG00000023928-8590.984Dipodomys_ordii
ENSCGRG00000011102Pabpn110098.315ENSDORG00000028966-5898.315Dipodomys_ordii
ENSCGRG00000011102Pabpn19569.935FBgn0005648Pabp26769.935Drosophila_melanogaster
ENSCGRG00000011102Pabpn19683.117ENSEBUG00000002322pabpn17277.381Eptatretus_burgeri
ENSCGRG00000011102Pabpn110099.438ENSEASG00005011716PABPN15899.438Equus_asinus_asinus
ENSCGRG00000011102Pabpn19998.864ENSECAG00000011652PABPN15699.398Equus_caballus
ENSCGRG00000011102Pabpn19197.279ENSEEUG00000012973-5792.814Erinaceus_europaeus
ENSCGRG00000011102Pabpn19193.878ENSELUG00000022654pabpn17085.119Esox_lucius
ENSCGRG00000011102Pabpn110099.438ENSFCAG00000031922PABPN15899.438Felis_catus
ENSCGRG00000011102Pabpn110098.315ENSFDAG00000018381BCL2L2-PABPN110098.315Fukomys_damarensis
ENSCGRG00000011102Pabpn19189.116ENSFHEG00000007215pabpn16389.116Fundulus_heteroclitus
ENSCGRG00000011102Pabpn19192.517ENSGMOG00000003922pabpn15192.517Gadus_morhua
ENSCGRG00000011102Pabpn19091.034ENSGAFG00000017099pabpn16290.476Gambusia_affinis
ENSCGRG00000011102Pabpn19191.216ENSGACG00000002167pabpn16091.216Gasterosteus_aculeatus
ENSCGRG00000011102Pabpn19485.030ENSGGOG00000025919-9883.784Gorilla_gorilla
ENSCGRG00000011102Pabpn19482.036ENSGGOG00000039675-6182.036Gorilla_gorilla
ENSCGRG00000011102Pabpn110099.438ENSGGOG00000022683-6699.438Gorilla_gorilla
ENSCGRG00000011102Pabpn19191.156ENSHBUG00000019523pabpn16391.156Haplochromis_burtoni
ENSCGRG00000011102Pabpn19090.345ENSHGLG00000018588-5490.345Heterocephalus_glaber_female
ENSCGRG00000011102Pabpn110098.876ENSHGLG00000002927-9996.178Heterocephalus_glaber_female
ENSCGRG00000011102Pabpn19476.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSCGRG00000011102Pabpn19090.345ENSHGLG00100015565-5590.345Heterocephalus_glaber_male
ENSCGRG00000011102Pabpn110098.876ENSHGLG00100006673-10098.876Heterocephalus_glaber_male
ENSCGRG00000011102Pabpn19488.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSCGRG00000011102Pabpn19190.476ENSHCOG00000004655pabpn16390.476Hippocampus_comes
ENSCGRG00000011102Pabpn19189.796ENSIPUG00000000180-6489.796Ictalurus_punctatus
ENSCGRG00000011102Pabpn19191.837ENSIPUG00000008085PABPN16391.837Ictalurus_punctatus
ENSCGRG00000011102Pabpn110099.438ENSSTOG00000029847BCL2L2-PABPN110099.438Ictidomys_tridecemlineatus
ENSCGRG00000011102Pabpn110099.438ENSJJAG00000023507Gm2052110099.438Jaculus_jaculus
ENSCGRG00000011102Pabpn19190.476ENSKMAG00000018748pabpn16290.476Kryptolebias_marmoratus
ENSCGRG00000011102Pabpn19191.156ENSLBEG00000027266pabpn16391.156Labrus_bergylta
ENSCGRG00000011102Pabpn19293.960ENSLACG00000000646pabpn16593.960Latimeria_chalumnae
ENSCGRG00000011102Pabpn110065.363ENSLOCG00000004694pabpn1l7664.286Lepisosteus_oculatus
ENSCGRG00000011102Pabpn19192.517ENSLOCG00000000796pabpn15392.517Lepisosteus_oculatus
ENSCGRG00000011102Pabpn18598.675ENSLAFG00000031227-10098.675Loxodonta_africana
ENSCGRG00000011102Pabpn17992.908ENSMFAG00000031355-9992.908Macaca_fascicularis
ENSCGRG00000011102Pabpn110099.438ENSMFAG00000032183BCL2L2-PABPN110099.438Macaca_fascicularis
ENSCGRG00000011102Pabpn110099.438ENSMMUG00000014747BCL2L2-PABPN110099.315Macaca_mulatta
ENSCGRG00000011102Pabpn18489.933ENSMMUG00000048382-5089.933Macaca_mulatta
ENSCGRG00000011102Pabpn110099.438ENSMNEG00000045065BCL2L2-PABPN16699.438Macaca_nemestrina
ENSCGRG00000011102Pabpn19485.119ENSMNEG00000035750-9992.908Macaca_nemestrina
ENSCGRG00000011102Pabpn19482.143ENSMLEG00000034623-9990.780Mandrillus_leucophaeus
ENSCGRG00000011102Pabpn110099.438ENSMLEG00000043862BCL2L2-PABPN110099.438Mandrillus_leucophaeus
ENSCGRG00000011102Pabpn19191.156ENSMAMG00000007979pabpn15191.156Mastacembelus_armatus
ENSCGRG00000011102Pabpn19191.156ENSMZEG00005011904pabpn15191.156Maylandia_zebra
ENSCGRG00000011102Pabpn1100100.000ENSMAUG00000007383Gm2052160100.000Mesocricetus_auratus
ENSCGRG00000011102Pabpn110099.438ENSMICG00000010002BCL2L2-PABPN16699.438Microcebus_murinus
ENSCGRG00000011102Pabpn110099.438ENSMOCG00000018557Gm205219797.484Microtus_ochrogaster
ENSCGRG00000011102Pabpn19191.156ENSMMOG00000005405pabpn16391.156Mola_mola
ENSCGRG00000011102Pabpn19197.279ENSMODG00000004535-5495.732Monodelphis_domestica
ENSCGRG00000011102Pabpn19191.156ENSMALG00000019612pabpn15191.156Monopterus_albus
ENSCGRG00000011102Pabpn110098.315MGP_CAROLIEiJ_G0019276Gm205215398.315Mus_caroli
ENSCGRG00000011102Pabpn110098.315MGP_CAROLIEiJ_G0019277Pabpn110098.315Mus_caroli
ENSCGRG00000011102Pabpn110098.876ENSMUSG00000092232Gm205215398.876Mus_musculus
ENSCGRG00000011102Pabpn110098.876ENSMUSG00000022194Pabpn110098.876Mus_musculus
ENSCGRG00000011102Pabpn110098.876MGP_PahariEiJ_G0030294Gm205215398.876Mus_pahari
ENSCGRG00000011102Pabpn110098.876MGP_PahariEiJ_G0030295Pabpn1100100.000Mus_pahari
ENSCGRG00000011102Pabpn110098.876MGP_SPRETEiJ_G0020166Pabpn110098.876Mus_spretus
ENSCGRG00000011102Pabpn110098.876MGP_SPRETEiJ_G0020165Gm205215398.876Mus_spretus
ENSCGRG00000011102Pabpn19399.398ENSMPUG00000006775-9999.398Mustela_putorius_furo
ENSCGRG00000011102Pabpn19492.899ENSMLUG00000012452-5593.491Myotis_lucifugus
ENSCGRG00000011102Pabpn110098.315ENSMLUG00000003800-9498.315Myotis_lucifugus
ENSCGRG00000011102Pabpn19495.210ENSMLUG00000028677-6195.210Myotis_lucifugus
ENSCGRG00000011102Pabpn110099.438ENSNGAG00000019529Gm205215399.438Nannospalax_galili
ENSCGRG00000011102Pabpn19191.156ENSNBRG00000023955pabpn19481.548Neolamprologus_brichardi
ENSCGRG00000011102Pabpn18372.297ENSNLEG00000035292-9972.297Nomascus_leucogenys
ENSCGRG00000011102Pabpn110099.438ENSNLEG00000015007-6399.438Nomascus_leucogenys
ENSCGRG00000011102Pabpn18887.943ENSNLEG00000030598-5687.943Nomascus_leucogenys
ENSCGRG00000011102Pabpn110086.517ENSODEG00000011555-8986.228Octodon_degus
ENSCGRG00000011102Pabpn19189.116ENSODEG00000003739-5189.116Octodon_degus
ENSCGRG00000011102Pabpn110098.876ENSODEG00000002083BCL2L2-PABPN15898.876Octodon_degus
ENSCGRG00000011102Pabpn19191.156ENSONIG00000008112pabpn15191.156Oreochromis_niloticus
ENSCGRG00000011102Pabpn18295.890ENSOANG00000009218-10095.890Ornithorhynchus_anatinus
ENSCGRG00000011102Pabpn110098.315ENSOCUG00000016174PABPN16598.315Oryctolagus_cuniculus
ENSCGRG00000011102Pabpn19191.156ENSORLG00000027900pabpn16291.156Oryzias_latipes
ENSCGRG00000011102Pabpn19191.156ENSORLG00020004681pabpn15091.156Oryzias_latipes_hni
ENSCGRG00000011102Pabpn19191.156ENSORLG00015000018pabpn16391.156Oryzias_latipes_hsok
ENSCGRG00000011102Pabpn19191.156ENSOMEG00000016618pabpn15491.156Oryzias_melastigma
ENSCGRG00000011102Pabpn110099.438ENSOGAG00000008710PABPN15899.438Otolemur_garnettii
ENSCGRG00000011102Pabpn110099.438ENSPPAG00000028984BCL2L2-PABPN19999.398Pan_paniscus
ENSCGRG00000011102Pabpn19483.234ENSPPAG00000039421-9383.234Pan_paniscus
ENSCGRG00000011102Pabpn110099.438ENSPPRG00000010567PABPN15899.438Panthera_pardus
ENSCGRG00000011102Pabpn110099.438ENSPTIG00000001063BCL2L2-PABPN110099.438Panthera_tigris_altaica
ENSCGRG00000011102Pabpn19480.240ENSPTRG00000047273-6180.240Pan_troglodytes
ENSCGRG00000011102Pabpn110099.438ENSPTRG00000006167BCL2L26699.438Pan_troglodytes
ENSCGRG00000011102Pabpn19485.119ENSPANG00000023326-9992.908Papio_anubis
ENSCGRG00000011102Pabpn110099.438ENSPANG00000021100BCL2L2-PABPN16699.438Papio_anubis
ENSCGRG00000011102Pabpn19293.243ENSPKIG00000008144-5193.197Paramormyrops_kingsleyae
ENSCGRG00000011102Pabpn19193.197ENSPKIG00000018052pabpn16293.197Paramormyrops_kingsleyae
ENSCGRG00000011102Pabpn18973.427ENSPKIG00000008340pabpn1l7073.427Paramormyrops_kingsleyae
ENSCGRG00000011102Pabpn16890.826ENSPSIG00000011959-8688.034Pelodiscus_sinensis
ENSCGRG00000011102Pabpn19190.476ENSPMGG00000022027pabpn15390.476Periophthalmus_magnuspinnatus
ENSCGRG00000011102Pabpn1100100.000ENSPEMG00000008332Gm205219598.089Peromyscus_maniculatus_bairdii
ENSCGRG00000011102Pabpn18887.943ENSPMAG00000006212pabpn16088.356Petromyzon_marinus
ENSCGRG00000011102Pabpn110096.629ENSPCIG00000027751-5896.629Phascolarctos_cinereus
ENSCGRG00000011102Pabpn19091.034ENSPFOG00000010351pabpn16190.476Poecilia_formosa
ENSCGRG00000011102Pabpn19091.034ENSPLAG00000022696pabpn15190.476Poecilia_latipinna
ENSCGRG00000011102Pabpn19091.034ENSPMEG00000020856pabpn16290.476Poecilia_mexicana
ENSCGRG00000011102Pabpn19091.034ENSPREG00000011278pabpn16290.476Poecilia_reticulata
ENSCGRG00000011102Pabpn19399.398ENSPPYG00000005663PABPN15999.398Pongo_abelii
ENSCGRG00000011102Pabpn19179.195ENSPCAG00000005902PABPN15380.128Procavia_capensis
ENSCGRG00000011102Pabpn110099.438ENSPCOG00000028047BCL2L2-PABPN16699.438Propithecus_coquereli
ENSCGRG00000011102Pabpn110097.191ENSPVAG00000005270PABPN15897.191Pteropus_vampyrus
ENSCGRG00000011102Pabpn19191.156ENSPNYG00000013182pabpn16391.156Pundamilia_nyererei
ENSCGRG00000011102Pabpn19192.517ENSPNAG00000023526pabpn16392.517Pygocentrus_nattereri
ENSCGRG00000011102Pabpn110062.011ENSPNAG00000021666pabpn1l7272.973Pygocentrus_nattereri
ENSCGRG00000011102Pabpn110099.438ENSRNOG00000042195Pabpn15999.438Rattus_norvegicus
ENSCGRG00000011102Pabpn19399.398ENSRBIG00000040762BCL2L2-PABPN15199.398Rhinopithecus_bieti
ENSCGRG00000011102Pabpn19487.425ENSRBIG00000039547-6084.431Rhinopithecus_bieti
ENSCGRG00000011102Pabpn19186.395ENSRBIG00000042811-6883.234Rhinopithecus_bieti
ENSCGRG00000011102Pabpn110099.438ENSRROG00000045535BCL2L2-PABPN110099.438Rhinopithecus_roxellana
ENSCGRG00000011102Pabpn19488.024ENSRROG00000040409-6085.030Rhinopithecus_roxellana
ENSCGRG00000011102Pabpn110092.670ENSSBOG00000026930BCL2L2-PABPN19999.398Saimiri_boliviensis_boliviensis
ENSCGRG00000011102Pabpn110096.629ENSSHAG00000014841-8296.629Sarcophilus_harrisii
ENSCGRG00000011102Pabpn110076.404ENSSHAG00000007707-7176.048Sarcophilus_harrisii
ENSCGRG00000011102Pabpn19171.429ENSSFOG00015015833pabpn1l6871.812Scleropages_formosus
ENSCGRG00000011102Pabpn19191.837ENSSFOG00015014718pabpn16391.837Scleropages_formosus
ENSCGRG00000011102Pabpn19192.517ENSSFOG00015012565pabpn16592.517Scleropages_formosus
ENSCGRG00000011102Pabpn19191.156ENSSMAG00000020157pabpn16391.156Scophthalmus_maximus
ENSCGRG00000011102Pabpn19191.156ENSSDUG00000020582pabpn15191.156Seriola_dumerili
ENSCGRG00000011102Pabpn19191.156ENSSLDG00000007118pabpn16391.156Seriola_lalandi_dorsalis
ENSCGRG00000011102Pabpn19492.216ENSSPUG00000018308-9492.216Sphenodon_punctatus
ENSCGRG00000011102Pabpn19191.156ENSSPAG00000021658pabpn16291.156Stegastes_partitus
ENSCGRG00000011102Pabpn19974.576ENSSSCG00000034805-6273.171Sus_scrofa
ENSCGRG00000011102Pabpn110099.438ENSSSCG00000002023PABPN15899.438Sus_scrofa
ENSCGRG00000011102Pabpn19954.545ENSSSCG00000038472-9153.892Sus_scrofa
ENSCGRG00000011102Pabpn19192.517ENSTRUG00000023664pabpn16392.517Takifugu_rubripes
ENSCGRG00000011102Pabpn19192.517ENSTNIG00000005369pabpn16792.517Tetraodon_nigroviridis
ENSCGRG00000011102Pabpn110099.438ENSUAMG00000024460PABPN15899.438Ursus_americanus
ENSCGRG00000011102Pabpn110099.438ENSUMAG00000014288BCL2L2-PABPN15399.438Ursus_maritimus
ENSCGRG00000011102Pabpn110099.438ENSVVUG00000019912BCL2L2-PABPN17099.438Vulpes_vulpes
ENSCGRG00000011102Pabpn19197.279ENSXETG00000014597pabpn15692.216Xenopus_tropicalis
ENSCGRG00000011102Pabpn19769.143ENSXCOG00000005158pabpn18980.921Xiphophorus_couchianus
ENSCGRG00000011102Pabpn19091.034ENSXMAG00000006196pabpn16290.476Xiphophorus_maculatus

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