EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000011341 (Gene tree)
Gene ID: -
Gene Symbol: Chd5
Alias: 4930532L22Rik|B230399N07Rik
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 47188 bases
Position: chrJH001938.1:139271-186458
Accession: 100766055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000015660	ResIII	PF04851.15	6.2e-08	1	1
ENSCGRP00000015657	ResIII	PF04851.15	6.4e-08	1	1
ENSCGRP00000015658	ResIII	PF04851.15	7.5e-08	1	1
ENSCGRP00000015659	ResIII	PF04851.15	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000015891	-	5658	-	ENSCGRP00000015660	1885 (aa)	-	-
ENSCGRT00000015890	-	6021	XM_016980734	ENSCGRP00000015659	2006 (aa)	XP_016836223	-
ENSCGRT00000015888	-	10234	XM_007653064	ENSCGRP00000015657	1930 (aa)	XP_007651254	-
ENSCGRT00000015889	-	5769	-	ENSCGRP00000015658	1922 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000011341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000011341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000011341	Chd5	95	72.265	ENSCGRG00000015920	Chd4	96	72.542
ENSCGRG00000011341	Chd5	94	67.199	ENSCGRG00000007878	Chd3	93	72.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000011341	Chd5	99	94.802	ENSG00000116254	CHD5	99	94.917	Homo_sapiens
ENSCGRG00000011341	Chd5	99	93.876	ENSAMEG00000009880	CHD5	100	93.935	Ailuropoda_melanoleuca
ENSCGRG00000011341	Chd5	97	77.641	ENSACIG00000012582	chd5	98	78.681	Amphilophus_citrinellus
ENSCGRG00000011341	Chd5	97	79.701	ENSAOCG00000020356	chd5	93	78.905	Amphiprion_ocellaris
ENSCGRG00000011341	Chd5	96	81.324	ENSAPLG00000015475	CHD5	98	81.412	Anas_platyrhynchos
ENSCGRG00000011341	Chd5	100	81.594	ENSACAG00000002441	CHD5	99	81.991	Anolis_carolinensis
ENSCGRG00000011341	Chd5	88	95.033	ENSANAG00000001078	CHD5	91	95.033	Aotus_nancymaae
ENSCGRG00000011341	Chd5	97	75.715	ENSACLG00000003012	chd5	99	75.174	Astatotilapia_calliptera
ENSCGRG00000011341	Chd5	85	84.553	ENSAMXG00000008921	chd5	97	82.255	Astyanax_mexicanus
ENSCGRG00000011341	Chd5	94	95.710	ENSBTAG00000040477	CHD5	100	95.710	Bos_taurus
ENSCGRG00000011341	Chd5	99	94.491	ENSCJAG00000000101	CHD5	99	94.508	Callithrix_jacchus
ENSCGRG00000011341	Chd5	94	95.542	ENSCAFG00000019545	CHD5	100	95.542	Canis_familiaris
ENSCGRG00000011341	Chd5	99	94.907	ENSCAFG00020008689	CHD5	99	92.989	Canis_lupus_dingo
ENSCGRG00000011341	Chd5	99	93.971	ENSCHIG00000015027	CHD5	98	92.734	Capra_hircus
ENSCGRG00000011341	Chd5	99	89.742	ENSTSYG00000033991	CHD5	99	90.412	Carlito_syrichta
ENSCGRG00000011341	Chd5	100	94.180	ENSCAPG00000009294	CHD5	100	94.868	Cavia_aperea
ENSCGRG00000011341	Chd5	100	94.180	ENSCPOG00000025080	CHD5	100	94.868	Cavia_porcellus
ENSCGRG00000011341	Chd5	99	94.595	ENSCCAG00000024756	CHD5	99	94.611	Cebus_capucinus
ENSCGRG00000011341	Chd5	99	93.971	ENSCATG00000043011	CHD5	99	94.087	Cercocebus_atys
ENSCGRG00000011341	Chd5	100	94.603	ENSCLAG00000010589	CHD5	100	95.238	Chinchilla_lanigera
ENSCGRG00000011341	Chd5	99	94.958	ENSCSAG00000000733	CHD5	99	95.073	Chlorocebus_sabaeus
ENSCGRG00000011341	Chd5	94	89.687	ENSCPBG00000019363	CHD5	100	89.578	Chrysemys_picta_bellii
ENSCGRG00000011341	Chd5	99	95.021	ENSCANG00000032302	CHD5	99	95.176	Colobus_angolensis_palliatus
ENSCGRG00000011341	Chd5	56	100.000	ENSCGRG00001011042	Chd5	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000011341	Chd5	95	68.006	ENSDARG00000025789	chd4b	96	68.127	Danio_rerio
ENSCGRG00000011341	Chd5	98	78.761	ENSDARG00000105083	chd5	97	80.455	Danio_rerio
ENSCGRG00000011341	Chd5	99	90.508	ENSDNOG00000046342	CHD5	99	90.353	Dasypus_novemcinctus
ENSCGRG00000011341	Chd5	100	94.292	ENSDORG00000005923	Chd5	100	95.032	Dipodomys_ordii
ENSCGRG00000011341	Chd5	99	93.439	ENSEASG00005021464	CHD5	99	96.327	Equus_asinus_asinus
ENSCGRG00000011341	Chd5	99	93.016	ENSECAG00000025043	CHD5	99	97.531	Equus_caballus
ENSCGRG00000011341	Chd5	78	98.140	ENSEEUG00000002772	CHD5	77	98.140	Erinaceus_europaeus
ENSCGRG00000011341	Chd5	95	76.940	ENSELUG00000010742	chd5	92	81.818	Esox_lucius
ENSCGRG00000011341	Chd5	99	94.696	ENSFCAG00000006319	CHD5	99	94.655	Felis_catus
ENSCGRG00000011341	Chd5	99	87.268	ENSFALG00000009740	CHD5	99	87.307	Ficedula_albicollis
ENSCGRG00000011341	Chd5	99	94.084	ENSFDAG00000012881	CHD5	98	93.495	Fukomys_damarensis
ENSCGRG00000011341	Chd5	99	87.345	ENSGALG00000000747	CHD5	99	87.190	Gallus_gallus
ENSCGRG00000011341	Chd5	57	82.721	ENSGACG00000004389	chd5	93	82.904	Gasterosteus_aculeatus
ENSCGRG00000011341	Chd5	89	96.020	ENSGAGG00000001590	CHD5	99	95.122	Gopherus_agassizii
ENSCGRG00000011341	Chd5	99	94.759	ENSGGOG00000000708	CHD5	100	94.914	Gorilla_gorilla
ENSCGRG00000011341	Chd5	97	76.505	ENSHBUG00000013453	chd5	99	76.015	Haplochromis_burtoni
ENSCGRG00000011341	Chd5	99	94.171	ENSHGLG00000018184	CHD5	99	95.061	Heterocephalus_glaber_female
ENSCGRG00000011341	Chd5	99	87.921	ENSHGLG00100013261	CHD5	98	88.000	Heterocephalus_glaber_male
ENSCGRG00000011341	Chd5	95	79.139	ENSIPUG00000005446	chd5	98	79.477	Ictalurus_punctatus
ENSCGRG00000011341	Chd5	100	95.132	ENSSTOG00000002778	CHD5	100	95.820	Ictidomys_tridecemlineatus
ENSCGRG00000011341	Chd5	99	96.017	ENSJJAG00000019072	Chd5	99	95.970	Jaculus_jaculus
ENSCGRG00000011341	Chd5	98	82.975	ENSLOCG00000004944	chd5	95	81.871	Lepisosteus_oculatus
ENSCGRG00000011341	Chd5	99	94.600	ENSLAFG00000006348	CHD5	100	95.228	Loxodonta_africana
ENSCGRG00000011341	Chd5	100	94.579	ENSMFAG00000033993	CHD5	100	95.377	Macaca_fascicularis
ENSCGRG00000011341	Chd5	99	94.958	ENSMMUG00000016838	CHD5	99	95.062	Macaca_mulatta
ENSCGRG00000011341	Chd5	99	95.010	ENSMNEG00000040044	CHD5	99	95.124	Macaca_nemestrina
ENSCGRG00000011341	Chd5	99	91.500	ENSMLEG00000039166	CHD5	100	91.654	Mandrillus_leucophaeus
ENSCGRG00000011341	Chd5	97	75.282	ENSMZEG00005000841	chd5	94	80.147	Maylandia_zebra
ENSCGRG00000011341	Chd5	99	87.332	ENSMGAG00000001055	CHD5	99	87.229	Meleagris_gallopavo
ENSCGRG00000011341	Chd5	99	92.344	ENSMICG00000017862	CHD5	99	92.160	Microcebus_murinus
ENSCGRG00000011341	Chd5	100	98.143	ENSMOCG00000011049	Chd5	99	98.143	Microtus_ochrogaster
ENSCGRG00000011341	Chd5	88	80.062	ENSMODG00000006294	CHD5	79	94.111	Monodelphis_domestica
ENSCGRG00000011341	Chd5	97	78.602	ENSMALG00000002831	chd5	99	77.382	Monopterus_albus
ENSCGRG00000011341	Chd5	99	97.352	MGP_CAROLIEiJ_G0026857	Chd5	99	97.352	Mus_caroli
ENSCGRG00000011341	Chd5	100	97.247	ENSMUSG00000005045	Chd5	99	97.247	Mus_musculus
ENSCGRG00000011341	Chd5	100	97.614	MGP_PahariEiJ_G0029205	Chd5	99	97.614	Mus_pahari
ENSCGRG00000011341	Chd5	100	97.508	MGP_SPRETEiJ_G0027850	Chd5	99	97.508	Mus_spretus
ENSCGRG00000011341	Chd5	99	90.845	ENSMPUG00000007122	CHD5	99	89.839	Mustela_putorius_furo
ENSCGRG00000011341	Chd5	99	94.906	ENSNGAG00000019812	Chd5	99	94.955	Nannospalax_galili
ENSCGRG00000011341	Chd5	99	92.268	ENSNLEG00000010320	CHD5	100	92.423	Nomascus_leucogenys
ENSCGRG00000011341	Chd5	87	87.833	ENSOPRG00000004304	CHD5	87	88.123	Ochotona_princeps
ENSCGRG00000011341	Chd5	100	94.233	ENSODEG00000010262	CHD5	100	94.815	Octodon_degus
ENSCGRG00000011341	Chd5	95	78.275	ENSONIG00000000619	chd5	93	78.299	Oreochromis_niloticus
ENSCGRG00000011341	Chd5	97	72.718	ENSOANG00000001819	CHD5	98	72.665	Ornithorhynchus_anatinus
ENSCGRG00000011341	Chd5	99	92.664	ENSOGAG00000005703	CHD5	99	92.535	Otolemur_garnettii
ENSCGRG00000011341	Chd5	99	93.465	ENSOARG00000013425	CHD5	99	93.568	Ovis_aries
ENSCGRG00000011341	Chd5	99	94.710	ENSPPAG00000034048	CHD5	100	94.865	Pan_paniscus
ENSCGRG00000011341	Chd5	99	94.176	ENSPPRG00000009453	CHD5	99	94.136	Panthera_pardus
ENSCGRG00000011341	Chd5	99	86.711	ENSPTIG00000013926	CHD5	99	86.864	Panthera_tigris_altaica
ENSCGRG00000011341	Chd5	99	94.753	ENSPTRG00000000075	CHD5	99	94.868	Pan_troglodytes
ENSCGRG00000011341	Chd5	99	95.062	ENSPANG00000006765	CHD5	99	95.176	Papio_anubis
ENSCGRG00000011341	Chd5	96	77.969	ENSPKIG00000004282	chd5	98	78.435	Paramormyrops_kingsleyae
ENSCGRG00000011341	Chd5	94	82.519	ENSPSIG00000006414	CHD5	100	82.574	Pelodiscus_sinensis
ENSCGRG00000011341	Chd5	69	98.532	ENSPEMG00000014799	Chd5	100	98.532	Peromyscus_maniculatus_bairdii
ENSCGRG00000011341	Chd5	99	91.001	ENSPCIG00000028310	CHD5	98	90.233	Phascolarctos_cinereus
ENSCGRG00000011341	Chd5	97	76.562	ENSPLAG00000005343	chd5	99	75.384	Poecilia_latipinna
ENSCGRG00000011341	Chd5	99	91.732	ENSPPYG00000001952	CHD5	100	91.888	Pongo_abelii
ENSCGRG00000011341	Chd5	99	95.218	ENSPCOG00000022930	CHD5	99	95.332	Propithecus_coquereli
ENSCGRG00000011341	Chd5	97	77.454	ENSPNYG00000003183	chd5	99	76.802	Pundamilia_nyererei
ENSCGRG00000011341	Chd5	99	97.247	ENSRNOG00000011268	Chd5	99	97.247	Rattus_norvegicus
ENSCGRG00000011341	Chd5	95	96.402	ENSRBIG00000032140	CHD5	95	96.402	Rhinopithecus_bieti
ENSCGRG00000011341	Chd5	99	94.914	ENSRROG00000041146	CHD5	99	95.070	Rhinopithecus_roxellana
ENSCGRG00000011341	Chd5	99	90.166	ENSSBOG00000001955	CHD5	100	94.955	Saimiri_boliviensis_boliviensis
ENSCGRG00000011341	Chd5	97	85.322	ENSSHAG00000018641	CHD5	99	85.367	Sarcophilus_harrisii
ENSCGRG00000011341	Chd5	89	88.412	ENSSFOG00015006296	chd5	90	92.093	Scleropages_formosus
ENSCGRG00000011341	Chd5	97	78.648	ENSSDUG00000017526	chd5	94	83.267	Seriola_dumerili
ENSCGRG00000011341	Chd5	98	81.607	ENSSPUG00000010622	CHD5	97	81.371	Sphenodon_punctatus
ENSCGRG00000011341	Chd5	99	95.003	ENSSSCG00000003366	CHD5	100	95.817	Sus_scrofa
ENSCGRG00000011341	Chd5	94	84.190	ENSTGUG00000002634	-	100	84.142	Taeniopygia_guttata
ENSCGRG00000011341	Chd5	54	80.431	ENSTNIG00000004346	chd5	99	80.569	Tetraodon_nigroviridis
ENSCGRG00000011341	Chd5	99	93.813	ENSTTRG00000010468	CHD5	99	93.892	Tursiops_truncatus
ENSCGRG00000011341	Chd5	99	94.869	ENSUAMG00000024509	CHD5	98	94.613	Ursus_americanus
ENSCGRG00000011341	Chd5	99	89.785	ENSUMAG00000024173	CHD5	98	90.112	Ursus_maritimus
ENSCGRG00000011341	Chd5	99	93.800	ENSVVUG00000026480	CHD5	98	96.748	Vulpes_vulpes
ENSCGRG00000011341	Chd5	98	80.352	ENSXETG00000002904	chd5	99	79.745	Xenopus_tropicalis
ENSCGRG00000011341	Chd5	60	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus