EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000011529 (Gene tree)
Gene ID: -
Gene Symbol: Safb
Alias: 3110021E02Rik|5330423C17Rik|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 18632 bases
Position: chrJH000282.1:787572-806203
Accession: 100771098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000015881	RRM_5	PF13893.6	2.9e-06	1	1
ENSCGRP00000015881	RRM_1	PF00076.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000016117	-	2718	XM_016975275	ENSCGRP00000015881	905 (aa)	XP_016830764	-

Gene Model

Click here to download ENSCGRG00000011529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000011529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000011529	Safb	96	80.871	ENSG00000160633	SAFB	81	93.600	Homo_sapiens
ENSCGRG00000011529	Safb	89	40.958	ENSAPOG00000022508	safb	55	38.368	Acanthochromis_polyacanthus
ENSCGRG00000011529	Safb	96	81.029	ENSAMEG00000012254	SAFB	91	80.571	Ailuropoda_melanoleuca
ENSCGRG00000011529	Safb	93	56.876	ENSAPLG00000006355	-	62	52.273	Anas_platyrhynchos
ENSCGRG00000011529	Safb	96	59.230	ENSAPLG00000005780	-	96	58.163	Anas_platyrhynchos
ENSCGRG00000011529	Safb	96	80.871	ENSANAG00000028821	SAFB	90	80.871	Aotus_nancymaae
ENSCGRG00000011529	Safb	96	77.663	ENSBTAG00000007875	SAFB	90	77.663	Bos_taurus
ENSCGRG00000011529	Safb	77	87.114	ENSCJAG00000017081	SAFB	100	90.520	Callithrix_jacchus
ENSCGRG00000011529	Safb	96	81.443	ENSCAFG00000018803	SAFB	78	81.443	Canis_familiaris
ENSCGRG00000011529	Safb	96	81.443	ENSCAFG00020018943	SAFB	90	81.443	Canis_lupus_dingo
ENSCGRG00000011529	Safb	96	77.090	ENSCHIG00000007262	SAFB	90	77.090	Capra_hircus
ENSCGRG00000011529	Safb	59	75.655	ENSTSYG00000001851	-	100	68.852	Carlito_syrichta
ENSCGRG00000011529	Safb	96	80.402	ENSCAPG00000012121	SAFB	96	79.397	Cavia_aperea
ENSCGRG00000011529	Safb	96	82.159	ENSCPOG00000026322	SAFB	90	81.932	Cavia_porcellus
ENSCGRG00000011529	Safb	96	80.778	ENSCCAG00000020193	SAFB	88	82.682	Cebus_capucinus
ENSCGRG00000011529	Safb	96	80.871	ENSCATG00000029994	SAFB	89	82.812	Cercocebus_atys
ENSCGRG00000011529	Safb	96	83.144	ENSCLAG00000007734	SAFB	90	83.257	Chinchilla_lanigera
ENSCGRG00000011529	Safb	96	80.756	ENSCSAG00000009949	SAFB	90	80.756	Chlorocebus_sabaeus
ENSCGRG00000011529	Safb	83	97.619	ENSCHOG00000003208	SAFB	86	97.619	Choloepus_hoffmanni
ENSCGRG00000011529	Safb	96	59.024	ENSCPBG00000010928	-	98	57.500	Chrysemys_picta_bellii
ENSCGRG00000011529	Safb	96	55.628	ENSCPBG00000010936	-	62	51.821	Chrysemys_picta_bellii
ENSCGRG00000011529	Safb	96	75.601	ENSCANG00000019754	-	90	75.601	Colobus_angolensis_palliatus
ENSCGRG00000011529	Safb	92	92.040	ENSCANG00000004774	-	88	92.040	Colobus_angolensis_palliatus
ENSCGRG00000011529	Safb	99	97.121	ENSCGRG00001002254	Safb	97	97.121	Cricetulus_griseus_chok1gshd
ENSCGRG00000011529	Safb	58	48.485	ENSCSEG00000019870	safb	55	35.484	Cynoglossus_semilaevis
ENSCGRG00000011529	Safb	88	39.146	ENSDARG00000020467	safb	56	38.632	Danio_rerio
ENSCGRG00000011529	Safb	96	79.725	ENSDNOG00000015746	SAFB	91	78.009	Dasypus_novemcinctus
ENSCGRG00000011529	Safb	96	77.438	ENSDORG00000016200	Safb	90	77.149	Dipodomys_ordii
ENSCGRG00000011529	Safb	78	85.000	ENSETEG00000018679	SAFB	85	85.000	Echinops_telfairi
ENSCGRG00000011529	Safb	96	79.954	ENSEASG00005023019	SAFB	90	79.157	Equus_asinus_asinus
ENSCGRG00000011529	Safb	96	81.558	ENSECAG00000018659	SAFB	80	81.672	Equus_caballus
ENSCGRG00000011529	Safb	93	37.955	ENSELUG00000022327	safb	58	37.031	Esox_lucius
ENSCGRG00000011529	Safb	96	81.766	ENSFCAG00000011835	SAFB	90	81.766	Felis_catus
ENSCGRG00000011529	Safb	96	59.343	ENSFALG00000013882	-	83	58.730	Ficedula_albicollis
ENSCGRG00000011529	Safb	96	53.043	ENSFALG00000013881	-	63	51.913	Ficedula_albicollis
ENSCGRG00000011529	Safb	96	77.000	ENSFDAG00000020306	SAFB	88	77.661	Fukomys_damarensis
ENSCGRG00000011529	Safb	96	59.705	ENSGALG00000013365	-	90	58.750	Gallus_gallus
ENSCGRG00000011529	Safb	68	60.645	ENSGAGG00000017702	-	92	58.333	Gopherus_agassizii
ENSCGRG00000011529	Safb	92	56.413	ENSGAGG00000008424	-	60	51.244	Gopherus_agassizii
ENSCGRG00000011529	Safb	96	80.641	ENSGGOG00000015109	SAFB	89	82.552	Gorilla_gorilla
ENSCGRG00000011529	Safb	96	83.657	ENSHGLG00000015883	SAFB	90	83.657	Heterocephalus_glaber_female
ENSCGRG00000011529	Safb	57	53.160	ENSIPUG00000024869	safb2	55	40.630	Ictalurus_punctatus
ENSCGRG00000011529	Safb	96	84.783	ENSSTOG00000002783	SAFB	97	84.783	Ictidomys_tridecemlineatus
ENSCGRG00000011529	Safb	96	85.194	ENSJJAG00000009021	Safb	91	85.991	Jaculus_jaculus
ENSCGRG00000011529	Safb	89	37.690	ENSLBEG00000006015	safb	52	39.006	Labrus_bergylta
ENSCGRG00000011529	Safb	62	44.276	ENSLACG00000018090	SAFB	58	45.409	Latimeria_chalumnae
ENSCGRG00000011529	Safb	95	41.150	ENSLOCG00000003613	safb	66	40.032	Lepisosteus_oculatus
ENSCGRG00000011529	Safb	95	78.851	ENSLAFG00000003840	SAFB	90	77.701	Loxodonta_africana
ENSCGRG00000011529	Safb	96	80.778	ENSMFAG00000003885	SAFB	89	82.812	Macaca_fascicularis
ENSCGRG00000011529	Safb	96	80.871	ENSMMUG00000017970	SAFB	89	82.812	Macaca_mulatta
ENSCGRG00000011529	Safb	96	77.117	ENSMNEG00000035637	SAFB	90	76.087	Macaca_nemestrina
ENSCGRG00000011529	Safb	96	75.257	ENSMLEG00000038637	SAFB	90	73.844	Mandrillus_leucophaeus
ENSCGRG00000011529	Safb	89	38.554	ENSMZEG00005009120	safb	56	39.062	Maylandia_zebra
ENSCGRG00000011529	Safb	85	54.580	ENSMGAG00000001051	-	89	55.471	Meleagris_gallopavo
ENSCGRG00000011529	Safb	99	57.596	ENSMGAG00000001101	-	97	56.346	Meleagris_gallopavo
ENSCGRG00000011529	Safb	54	99.383	ENSMAUG00000005013	Safb	100	99.383	Mesocricetus_auratus
ENSCGRG00000011529	Safb	81	68.750	ENSMICG00000046795	-	88	66.801	Microcebus_murinus
ENSCGRG00000011529	Safb	96	79.818	ENSMICG00000008739	-	89	78.906	Microcebus_murinus
ENSCGRG00000011529	Safb	97	92.117	ENSMOCG00000014040	Safb	92	92.117	Microtus_ochrogaster
ENSCGRG00000011529	Safb	98	65.642	ENSMODG00000001236	SAFB	92	65.862	Monodelphis_domestica
ENSCGRG00000011529	Safb	87	38.217	ENSMALG00000020330	safb	57	36.813	Monopterus_albus
ENSCGRG00000011529	Safb	97	91.451	MGP_CAROLIEiJ_G0021780	Safb	92	91.451	Mus_caroli
ENSCGRG00000011529	Safb	96	92.000	ENSMUSG00000071054	Safb	90	92.571	Mus_musculus
ENSCGRG00000011529	Safb	97	91.461	MGP_PahariEiJ_G0020769	Safb	92	91.348	Mus_pahari
ENSCGRG00000011529	Safb	96	81.443	ENSMPUG00000006123	SAFB	85	81.443	Mustela_putorius_furo
ENSCGRG00000011529	Safb	96	80.527	ENSMLUG00000001081	SAFB	90	80.527	Myotis_lucifugus
ENSCGRG00000011529	Safb	96	85.308	ENSNGAG00000019882	Safb	90	85.308	Nannospalax_galili
ENSCGRG00000011529	Safb	96	77.588	ENSNLEG00000013551	SAFB	89	82.579	Nomascus_leucogenys
ENSCGRG00000011529	Safb	92	76.534	ENSOPRG00000011561	-	97	77.256	Ochotona_princeps
ENSCGRG00000011529	Safb	96	84.055	ENSODEG00000014838	SAFB	90	84.055	Octodon_degus
ENSCGRG00000011529	Safb	89	38.498	ENSONIG00000002318	safb	55	38.419	Oreochromis_niloticus
ENSCGRG00000011529	Safb	96	73.943	ENSOCUG00000014628	SAFB	63	73.415	Oryctolagus_cuniculus
ENSCGRG00000011529	Safb	96	76.196	ENSOGAG00000027769	SAFB	90	75.968	Otolemur_garnettii
ENSCGRG00000011529	Safb	81	70.396	ENSOARG00000007856	-	96	70.123	Ovis_aries
ENSCGRG00000011529	Safb	96	73.883	ENSOARG00000007662	-	90	71.821	Ovis_aries
ENSCGRG00000011529	Safb	96	80.664	ENSPPAG00000035129	SAFB	89	82.682	Pan_paniscus
ENSCGRG00000011529	Safb	96	81.766	ENSPPRG00000017197	SAFB	90	81.766	Panthera_pardus
ENSCGRG00000011529	Safb	96	80.664	ENSPTRG00000010335	SAFB	89	82.682	Pan_troglodytes
ENSCGRG00000011529	Safb	96	80.664	ENSPANG00000007770	SAFB	89	82.682	Papio_anubis
ENSCGRG00000011529	Safb	96	57.395	ENSPSIG00000011679	-	60	53.541	Pelodiscus_sinensis
ENSCGRG00000011529	Safb	97	55.422	ENSPSIG00000009367	-	56	51.546	Pelodiscus_sinensis
ENSCGRG00000011529	Safb	97	93.228	ENSPEMG00000020428	Safb	92	93.228	Peromyscus_maniculatus_bairdii
ENSCGRG00000011529	Safb	59	78.967	ENSPCIG00000009504	-	99	79.359	Phascolarctos_cinereus
ENSCGRG00000011529	Safb	96	80.871	ENSPPYG00000009428	SAFB	90	80.871	Pongo_abelii
ENSCGRG00000011529	Safb	96	74.685	ENSPCAG00000006475	SAFB	90	75.029	Procavia_capensis
ENSCGRG00000011529	Safb	96	74.230	ENSPCOG00000014090	SAFB	90	73.432	Propithecus_coquereli
ENSCGRG00000011529	Safb	96	73.998	ENSPVAG00000004913	SAFB	90	74.341	Pteropus_vampyrus
ENSCGRG00000011529	Safb	96	90.888	ENSRNOG00000050543	Safb	98	90.035	Rattus_norvegicus
ENSCGRG00000011529	Safb	96	68.757	ENSRBIG00000042509	SAFB	97	64.118	Rhinopithecus_bieti
ENSCGRG00000011529	Safb	96	80.664	ENSRROG00000029278	SAFB	89	82.682	Rhinopithecus_roxellana
ENSCGRG00000011529	Safb	96	80.871	ENSSBOG00000026291	SAFB	90	80.871	Saimiri_boliviensis_boliviensis
ENSCGRG00000011529	Safb	94	40.154	ENSSFOG00015008156	safb	58	40.271	Scleropages_formosus
ENSCGRG00000011529	Safb	94	37.681	ENSSMAG00000009316	safb	56	39.033	Scophthalmus_maximus
ENSCGRG00000011529	Safb	96	76.000	ENSSARG00000010475	SAFB	97	76.343	Sorex_araneus
ENSCGRG00000011529	Safb	56	49.534	ENSSPUG00000009820	-	64	51.481	Sphenodon_punctatus
ENSCGRG00000011529	Safb	62	47.865	ENSSPUG00000009747	-	65	47.509	Sphenodon_punctatus
ENSCGRG00000011529	Safb	96	80.317	ENSSSCG00000013522	SAFB	88	79.536	Sus_scrofa
ENSCGRG00000011529	Safb	93	58.186	ENSTGUG00000000502	-	90	57.833	Taeniopygia_guttata
ENSCGRG00000011529	Safb	70	86.364	ENSTBEG00000013124	-	56	89.394	Tupaia_belangeri
ENSCGRG00000011529	Safb	89	81.390	ENSTTRG00000013588	SAFB	85	80.769	Tursiops_truncatus
ENSCGRG00000011529	Safb	81	83.924	ENSUAMG00000024543	SAFB	99	84.038	Ursus_americanus
ENSCGRG00000011529	Safb	79	90.780	ENSUMAG00000009734	SAFB	78	90.780	Ursus_maritimus
ENSCGRG00000011529	Safb	74	90.769	ENSVPAG00000012043	SAFB	75	90.769	Vicugna_pacos
ENSCGRG00000011529	Safb	96	81.443	ENSVVUG00000013720	SAFB	78	81.443	Vulpes_vulpes
ENSCGRG00000011529	Safb	61	43.929	ENSXETG00000008755	safb	59	44.583	Xenopus_tropicalis