EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000011952 (Gene tree)
Gene ID: -
Gene Symbol: Rc3h1
Alias: 5730557L09Rik|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 40384 bases
Position: chrJH000079.1:1558866-1599249
Accession: 100750750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000016461	zf-CCCH	PF00642.24	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000016704	-	3782	XM_003497667	ENSCGRP00000016461	1128 (aa)	XP_003497715	UPI00022F3DD4

Gene Model

Click here to download ENSCGRG00000011952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000011952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000011952	Rc3h1	69	59.459	ENSCGRG00000009255	Rc3h2	76	58.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000011952	Rc3h1	100	93.822	ENSG00000135870	RC3H1	100	94.263	Homo_sapiens
ENSCGRG00000011952	Rc3h1	100	94.346	ENSAMEG00000015657	RC3H1	100	94.346	Ailuropoda_melanoleuca
ENSCGRG00000011952	Rc3h1	100	86.288	ENSAPLG00000005341	RC3H1	100	85.752	Anas_platyrhynchos
ENSCGRG00000011952	Rc3h1	100	83.829	ENSACAG00000015271	RC3H1	100	83.713	Anolis_carolinensis
ENSCGRG00000011952	Rc3h1	100	93.910	ENSANAG00000036716	RC3H1	100	94.351	Aotus_nancymaae
ENSCGRG00000011952	Rc3h1	100	92.586	ENSBTAG00000052708	RC3H1	100	93.027	Bos_taurus
ENSCGRG00000011952	Rc3h1	100	93.733	ENSCJAG00000009106	RC3H1	100	94.175	Callithrix_jacchus
ENSCGRG00000011952	Rc3h1	100	94.081	ENSCAFG00000014434	RC3H1	100	94.523	Canis_familiaris
ENSCGRG00000011952	Rc3h1	100	93.998	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSCGRG00000011952	Rc3h1	100	92.933	ENSCHIG00000002873	RC3H1	100	93.375	Capra_hircus
ENSCGRG00000011952	Rc3h1	99	92.845	ENSTSYG00000003913	RC3H1	99	93.198	Carlito_syrichta
ENSCGRG00000011952	Rc3h1	100	90.548	ENSCPOG00000004349	RC3H1	100	90.548	Cavia_porcellus
ENSCGRG00000011952	Rc3h1	100	91.968	ENSCCAG00000025652	RC3H1	100	92.410	Cebus_capucinus
ENSCGRG00000011952	Rc3h1	100	93.910	ENSCATG00000033497	RC3H1	100	94.351	Cercocebus_atys
ENSCGRG00000011952	Rc3h1	100	92.763	ENSCLAG00000011267	RC3H1	100	93.116	Chinchilla_lanigera
ENSCGRG00000011952	Rc3h1	96	93.923	ENSCSAG00000011823	RC3H1	85	94.383	Chlorocebus_sabaeus
ENSCGRG00000011952	Rc3h1	100	87.884	ENSCPBG00000014670	RC3H1	100	87.357	Chrysemys_picta_bellii
ENSCGRG00000011952	Rc3h1	100	93.915	ENSCANG00000032120	RC3H1	100	94.356	Colobus_angolensis_palliatus
ENSCGRG00000011952	Rc3h1	100	100.000	ENSCGRG00001020812	Rc3h1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000011952	Rc3h1	55	91.318	ENSDNOG00000011494	RC3H1	99	91.961	Dasypus_novemcinctus
ENSCGRG00000011952	Rc3h1	100	93.198	ENSDORG00000004855	Rc3h1	100	93.286	Dipodomys_ordii
ENSCGRG00000011952	Rc3h1	81	94.611	ENSETEG00000012064	RC3H1	87	94.838	Echinops_telfairi
ENSCGRG00000011952	Rc3h1	100	92.573	ENSEASG00005017000	RC3H1	100	92.927	Equus_asinus_asinus
ENSCGRG00000011952	Rc3h1	100	92.396	ENSECAG00000021208	RC3H1	100	92.750	Equus_caballus
ENSCGRG00000011952	Rc3h1	83	95.378	ENSEEUG00000014861	RC3H1	93	82.375	Erinaceus_europaeus
ENSCGRG00000011952	Rc3h1	100	94.175	ENSFCAG00000014924	RC3H1	100	94.616	Felis_catus
ENSCGRG00000011952	Rc3h1	100	85.127	ENSFALG00000002947	RC3H1	100	84.501	Ficedula_albicollis
ENSCGRG00000011952	Rc3h1	100	93.557	ENSFDAG00000013303	RC3H1	100	93.822	Fukomys_damarensis
ENSCGRG00000011952	Rc3h1	100	85.589	ENSGALG00000004587	RC3H1	100	85.048	Gallus_gallus
ENSCGRG00000011952	Rc3h1	100	85.953	ENSGAGG00000018194	RC3H1	100	85.777	Gopherus_agassizii
ENSCGRG00000011952	Rc3h1	100	88.251	ENSGGOG00000005735	RC3H1	100	88.251	Gorilla_gorilla
ENSCGRG00000011952	Rc3h1	88	87.957	ENSHGLG00000004183	-	100	87.957	Heterocephalus_glaber_female
ENSCGRG00000011952	Rc3h1	100	92.674	ENSHGLG00100008577	RC3H1	100	93.027	Heterocephalus_glaber_male
ENSCGRG00000011952	Rc3h1	100	93.993	ENSSTOG00000016033	RC3H1	100	94.523	Ictidomys_tridecemlineatus
ENSCGRG00000011952	Rc3h1	100	94.253	ENSJJAG00000018915	Rc3h1	100	94.341	Jaculus_jaculus
ENSCGRG00000011952	Rc3h1	100	74.782	ENSLACG00000016186	RC3H1	100	78.023	Latimeria_chalumnae
ENSCGRG00000011952	Rc3h1	97	94.713	ENSLAFG00000004367	RC3H1	100	95.169	Loxodonta_africana
ENSCGRG00000011952	Rc3h1	100	93.822	ENSMFAG00000033725	RC3H1	100	94.263	Macaca_fascicularis
ENSCGRG00000011952	Rc3h1	100	93.910	ENSMMUG00000000630	RC3H1	100	94.351	Macaca_mulatta
ENSCGRG00000011952	Rc3h1	100	93.910	ENSMNEG00000035968	RC3H1	100	94.351	Macaca_nemestrina
ENSCGRG00000011952	Rc3h1	100	93.822	ENSMLEG00000037455	RC3H1	100	94.263	Mandrillus_leucophaeus
ENSCGRG00000011952	Rc3h1	88	98.888	ENSMAUG00000020864	Rc3h1	93	98.888	Mesocricetus_auratus
ENSCGRG00000011952	Rc3h1	100	94.170	ENSMICG00000003000	RC3H1	100	94.611	Microcebus_murinus
ENSCGRG00000011952	Rc3h1	93	96.486	ENSMOCG00000016587	Rc3h1	98	96.486	Microtus_ochrogaster
ENSCGRG00000011952	Rc3h1	100	90.476	ENSMODG00000004289	RC3H1	100	90.564	Monodelphis_domestica
ENSCGRG00000011952	Rc3h1	100	96.018	MGP_CAROLIEiJ_G0014756	Rc3h1	100	96.018	Mus_caroli
ENSCGRG00000011952	Rc3h1	100	95.841	ENSMUSG00000040423	Rc3h1	100	95.841	Mus_musculus
ENSCGRG00000011952	Rc3h1	100	95.841	MGP_PahariEiJ_G0027992	Rc3h1	100	95.841	Mus_pahari
ENSCGRG00000011952	Rc3h1	100	95.575	MGP_SPRETEiJ_G0015563	Rc3h1	100	95.575	Mus_spretus
ENSCGRG00000011952	Rc3h1	100	94.170	ENSMPUG00000004747	RC3H1	100	94.170	Mustela_putorius_furo
ENSCGRG00000011952	Rc3h1	100	92.927	ENSMLUG00000011127	RC3H1	100	93.369	Myotis_lucifugus
ENSCGRG00000011952	Rc3h1	100	96.637	ENSNGAG00000011135	Rc3h1	100	96.637	Nannospalax_galili
ENSCGRG00000011952	Rc3h1	100	93.998	ENSNLEG00000015327	RC3H1	100	94.440	Nomascus_leucogenys
ENSCGRG00000011952	Rc3h1	99	81.504	ENSOPRG00000013068	RC3H1	99	81.681	Ochotona_princeps
ENSCGRG00000011952	Rc3h1	100	93.198	ENSODEG00000014185	RC3H1	100	93.198	Octodon_degus
ENSCGRG00000011952	Rc3h1	100	89.083	ENSOANG00000000924	RC3H1	100	89.170	Ornithorhynchus_anatinus
ENSCGRG00000011952	Rc3h1	99	93.280	ENSOCUG00000004930	RC3H1	98	93.728	Oryctolagus_cuniculus
ENSCGRG00000011952	Rc3h1	100	87.213	ENSOGAG00000004044	RC3H1	100	87.213	Otolemur_garnettii
ENSCGRG00000011952	Rc3h1	100	93.070	ENSOARG00000013011	RC3H1	100	93.509	Ovis_aries
ENSCGRG00000011952	Rc3h1	100	93.827	ENSPPAG00000039253	RC3H1	100	94.268	Pan_paniscus
ENSCGRG00000011952	Rc3h1	100	93.728	ENSPPRG00000009007	RC3H1	100	94.170	Panthera_pardus
ENSCGRG00000011952	Rc3h1	100	93.843	ENSPTIG00000015326	RC3H1	100	94.459	Panthera_tigris_altaica
ENSCGRG00000011952	Rc3h1	100	93.827	ENSPTRG00000001702	RC3H1	100	94.268	Pan_troglodytes
ENSCGRG00000011952	Rc3h1	100	93.822	ENSPANG00000008886	RC3H1	100	94.263	Papio_anubis
ENSCGRG00000011952	Rc3h1	100	87.895	ENSPSIG00000016181	RC3H1	100	88.070	Pelodiscus_sinensis
ENSCGRG00000011952	Rc3h1	100	97.254	ENSPEMG00000011966	Rc3h1	100	97.254	Peromyscus_maniculatus_bairdii
ENSCGRG00000011952	Rc3h1	70	93.536	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSCGRG00000011952	Rc3h1	100	90.997	ENSPPYG00000000490	RC3H1	98	93.589	Pongo_abelii
ENSCGRG00000011952	Rc3h1	80	97.368	ENSPCAG00000010775	RC3H1	87	97.368	Procavia_capensis
ENSCGRG00000011952	Rc3h1	83	92.727	ENSPCOG00000021795	RC3H1	96	93.262	Propithecus_coquereli
ENSCGRG00000011952	Rc3h1	100	85.057	ENSPVAG00000007593	RC3H1	100	85.411	Pteropus_vampyrus
ENSCGRG00000011952	Rc3h1	97	61.362	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSCGRG00000011952	Rc3h1	100	93.915	ENSRBIG00000037743	RC3H1	100	94.356	Rhinopithecus_bieti
ENSCGRG00000011952	Rc3h1	100	93.822	ENSRROG00000036546	RC3H1	100	94.263	Rhinopithecus_roxellana
ENSCGRG00000011952	Rc3h1	93	84.325	ENSSBOG00000010664	RC3H1	100	88.542	Saimiri_boliviensis_boliviensis
ENSCGRG00000011952	Rc3h1	100	89.604	ENSSHAG00000007589	RC3H1	100	89.692	Sarcophilus_harrisii
ENSCGRG00000011952	Rc3h1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSCGRG00000011952	Rc3h1	100	82.472	ENSSPUG00000018472	RC3H1	100	82.982	Sphenodon_punctatus
ENSCGRG00000011952	Rc3h1	100	94.523	ENSSSCG00000015498	RC3H1	100	94.965	Sus_scrofa
ENSCGRG00000011952	Rc3h1	100	85.752	ENSTGUG00000004090	RC3H1	100	85.035	Taeniopygia_guttata
ENSCGRG00000011952	Rc3h1	89	95.640	ENSTBEG00000005015	RC3H1	89	95.640	Tupaia_belangeri
ENSCGRG00000011952	Rc3h1	100	93.480	ENSTTRG00000008572	RC3H1	100	93.921	Tursiops_truncatus
ENSCGRG00000011952	Rc3h1	100	93.993	ENSUAMG00000019525	RC3H1	100	93.993	Ursus_americanus
ENSCGRG00000011952	Rc3h1	100	94.351	ENSUMAG00000020087	RC3H1	100	94.351	Ursus_maritimus
ENSCGRG00000011952	Rc3h1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSCGRG00000011952	Rc3h1	100	93.750	ENSVVUG00000014201	RC3H1	100	94.190	Vulpes_vulpes
ENSCGRG00000011952	Rc3h1	100	77.962	ENSXETG00000020030	rc3h1	100	77.700	Xenopus_tropicalis