EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000012088 (Gene tree)
Gene ID: -
Gene Symbol: Zfp560
Alias: 2310030G09Rik
Full Name: zinc finger protein 883
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 6694 bases
Position: chrJH000173.1:1886244-1892937
Accession: 100750376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	1	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	2	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	3	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	4	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	5	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	6	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	7	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	8	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	9	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	10	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	11	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	12	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	13	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	14	15
ENSCGRP00000016641	zf-C2H2	PF00096.26	2.8e-84	15	15
ENSCGRP00000016641	zf-met	PF12874.7	6.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000016886	-	2262	XM_007640527	ENSCGRP00000016641	753 (aa)	XP_007638717	-

Gene Model

Click here to download ENSCGRG00000012088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000012088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000012088	Zfp560	65	57.143	ENSCGRG00000000462	Sall4	55	57.143
ENSCGRG00000012088	Zfp560	95	43.284	ENSCGRG00000009496	Sall1	63	43.284
ENSCGRG00000012088	Zfp560	73	53.012	ENSCGRG00000004206	-	96	53.012
ENSCGRG00000012088	Zfp560	80	51.014	ENSCGRG00000017528	Zfp94	91	51.014
ENSCGRG00000012088	Zfp560	67	46.053	ENSCGRG00000014932	Snai3	53	46.053
ENSCGRG00000012088	Zfp560	95	60.612	ENSCGRG00000010436	-	90	60.612
ENSCGRG00000012088	Zfp560	88	55.396	ENSCGRG00000016421	-	99	55.396
ENSCGRG00000012088	Zfp560	72	37.283	ENSCGRG00000012333	Zfp574	92	38.424
ENSCGRG00000012088	Zfp560	69	51.724	ENSCGRG00000015327	Zfp112	58	46.953
ENSCGRG00000012088	Zfp560	66	36.667	ENSCGRG00000014598	Zfp319	93	36.681
ENSCGRG00000012088	Zfp560	61	44.762	ENSCGRG00000009080	Snai1	81	44.762
ENSCGRG00000012088	Zfp560	65	44.595	ENSCGRG00000016739	Zfp423	70	44.595
ENSCGRG00000012088	Zfp560	92	53.913	ENSCGRG00000014813	Zfp454	100	53.913
ENSCGRG00000012088	Zfp560	88	49.876	ENSCGRG00000000632	-	99	49.345
ENSCGRG00000012088	Zfp560	90	45.886	ENSCGRG00000008922	2610008E11Rik	95	47.706
ENSCGRG00000012088	Zfp560	91	52.594	ENSCGRG00000015037	Zfp354a	99	52.594
ENSCGRG00000012088	Zfp560	65	53.430	ENSCGRG00000006987	Zfp768	60	53.381
ENSCGRG00000012088	Zfp560	70	55.278	ENSCGRG00000015629	-	75	55.278
ENSCGRG00000012088	Zfp560	87	44.667	ENSCGRG00000013919	Zfp709	99	46.909
ENSCGRG00000012088	Zfp560	69	37.905	ENSCGRG00000010996	-	73	37.905
ENSCGRG00000012088	Zfp560	93	48.498	ENSCGRG00000013626	Zfp715	98	48.498
ENSCGRG00000012088	Zfp560	82	40.141	ENSCGRG00000009462	Zfp236	81	40.141
ENSCGRG00000012088	Zfp560	73	41.935	ENSCGRG00000009095	Zfp202	55	43.137
ENSCGRG00000012088	Zfp560	58	43.284	ENSCGRG00000012119	Snai2	52	43.284
ENSCGRG00000012088	Zfp560	69	36.923	ENSCGRG00000014952	Zbtb41	51	35.809
ENSCGRG00000012088	Zfp560	64	47.407	ENSCGRG00000013485	-	100	47.407
ENSCGRG00000012088	Zfp560	90	44.652	ENSCGRG00000000778	-	99	44.652
ENSCGRG00000012088	Zfp560	68	42.391	ENSCGRG00000014850	-	93	42.391
ENSCGRG00000012088	Zfp560	59	45.763	ENSCGRG00000001380	Scrt2	63	45.763
ENSCGRG00000012088	Zfp560	90	48.188	ENSCGRG00000016788	-	99	48.188
ENSCGRG00000012088	Zfp560	75	56.863	ENSCGRG00000018332	Zfp53	94	55.172
ENSCGRG00000012088	Zfp560	89	52.734	ENSCGRG00000008411	Gm3854	96	52.734
ENSCGRG00000012088	Zfp560	59	44.000	ENSCGRG00000008703	Wt1	53	42.718
ENSCGRG00000012088	Zfp560	89	52.044	ENSCGRG00000000411	-	99	52.044
ENSCGRG00000012088	Zfp560	61	41.772	ENSCGRG00000004814	Patz1	64	34.266
ENSCGRG00000012088	Zfp560	76	58.696	ENSCGRG00000015809	-	99	53.947
ENSCGRG00000012088	Zfp560	89	52.632	ENSCGRG00000009742	-	94	52.632
ENSCGRG00000012088	Zfp560	73	50.227	ENSCGRG00000008531	-	99	50.227
ENSCGRG00000012088	Zfp560	87	41.398	ENSCGRG00000002730	Zfp39	91	41.398
ENSCGRG00000012088	Zfp560	63	34.746	ENSCGRG00000015472	Repin1	83	34.746
ENSCGRG00000012088	Zfp560	97	52.402	ENSCGRG00000001582	Zkscan3	64	52.402
ENSCGRG00000012088	Zfp560	84	60.496	ENSCGRG00000000280	-	87	60.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000012088	Zfp560	72	87.861	ENSCPOG00000033345	-	99	87.861	Cavia_porcellus
ENSCGRG00000012088	Zfp560	100	100.000	ENSCGRG00001023858	Zfp560	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000012088	Zfp560	72	88.696	ENSFDAG00000008687	-	99	88.696	Fukomys_damarensis
ENSCGRG00000012088	Zfp560	89	79.080	ENSHGLG00000019054	-	99	88.696	Heterocephalus_glaber_female
ENSCGRG00000012088	Zfp560	89	79.080	ENSHGLG00100015134	-	98	79.080	Heterocephalus_glaber_male
ENSCGRG00000012088	Zfp560	89	78.539	ENSSTOG00000033893	-	98	78.539	Ictidomys_tridecemlineatus
ENSCGRG00000012088	Zfp560	100	77.834	ENSMOCG00000007908	Zfp560	100	74.904	Microtus_ochrogaster
ENSCGRG00000012088	Zfp560	99	80.026	ENSNGAG00000015897	Zfp560	99	80.026	Nannospalax_galili
ENSCGRG00000012088	Zfp560	72	89.244	ENSODEG00000017047	-	99	89.244	Octodon_degus
ENSCGRG00000012088	Zfp560	74	77.046	ENSOCUG00000029594	-	99	77.046	Oryctolagus_cuniculus
ENSCGRG00000012088	Zfp560	77	53.963	ENSOGAG00000025131	ZNF121	99	50.765	Otolemur_garnettii
ENSCGRG00000012088	Zfp560	85	86.625	ENSRNOG00000048394	Zfp560	99	86.625	Rattus_norvegicus