EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000012105 (Gene tree)
Gene ID: -
Gene Symbol: Polr2a
Alias: 220kDa|Rpo2-1
Full Name: RNA polymerase II subunit A
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 23842 bases
Position: chrJH000064.1:1792793-1816634
Accession: 100689016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000016666	RNA_pol_Rpb1_5	PF04998.17	6.3e-101	1	1
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	1	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	2	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	3	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	4	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	5	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	6	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	7	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	8	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	9	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	10	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	11	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	12	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	13	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	14	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	15	16
ENSCGRP00000016666	RNA_pol_Rpb1_R	PF05001.13	5.3e-15	16	16
ENSCGRP00000016666	RNA_pol_Rpb1_4	PF05000.17	3.7e-38	1	1
ENSCGRP00000016666	RNA_pol_Rpb1_2	PF00623.20	1.2e-74	1	1
ENSCGRP00000016666	RNA_pol_Rpb1_3	PF04983.18	8.6e-50	1	1
ENSCGRP00000016666	RNA_pol_Rpb1_1	PF04997.12	5.5e-109	1	1
ENSCGRP00000016666	RNA_pol_Rpb1_7	PF04990.12	2.2e-54	1	1
ENSCGRP00000016666	RNA_pol_Rpb1_6	PF04992.14	1.4e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000016911	-	5661	XM_007608356	ENSCGRP00000016666	1886 (aa)	XP_007606546	-

Gene Model

Click here to download ENSCGRG00000012105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000012105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000012105	Polr2a	52	37.859	ENSCGRG00000001019	Polr3a	85	37.859

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000012105	Polr2a	85	90.870	ENSAPOG00000006552	polr2a	82	90.859	Acanthochromis_polyacanthus
ENSCGRG00000012105	Polr2a	95	95.890	ENSAMEG00000016265	-	82	95.951	Ailuropoda_melanoleuca
ENSCGRG00000012105	Polr2a	85	91.090	ENSACIG00000015982	polr2a	81	91.079	Amphilophus_citrinellus
ENSCGRG00000012105	Polr2a	85	91.028	ENSAOCG00000004255	polr2a	84	91.017	Amphiprion_ocellaris
ENSCGRG00000012105	Polr2a	93	90.809	ENSAPEG00000012623	polr2a	82	90.798	Amphiprion_percula
ENSCGRG00000012105	Polr2a	93	90.686	ENSATEG00000019644	polr2a	82	90.675	Anabas_testudineus
ENSCGRG00000012105	Polr2a	95	94.294	ENSACAG00000014561	POLR2A	82	94.356	Anolis_carolinensis
ENSCGRG00000012105	Polr2a	99	95.747	ENSANAG00000020093	-	96	95.493	Aotus_nancymaae
ENSCGRG00000012105	Polr2a	93	90.564	ENSACLG00000006735	polr2a	82	90.596	Astatotilapia_calliptera
ENSCGRG00000012105	Polr2a	93	91.054	ENSAMXG00000020046	polr2a	82	91.043	Astyanax_mexicanus
ENSCGRG00000012105	Polr2a	95	96.074	ENSBTAG00000046765	POLR2A	96	95.493	Bos_taurus
ENSCGRG00000012105	Polr2a	96	96.012	ENSCAFG00000016532	POLR2A	90	96.074	Canis_familiaris
ENSCGRG00000012105	Polr2a	99	95.003	ENSCAFG00020007929	-	96	94.500	Canis_lupus_dingo
ENSCGRG00000012105	Polr2a	95	96.074	ENSCHIG00000027173	-	96	95.493	Capra_hircus
ENSCGRG00000012105	Polr2a	99	95.747	ENSTSYG00000012803	-	95	95.747	Carlito_syrichta
ENSCGRG00000012105	Polr2a	96	91.382	ENSCAPG00000001882	-	87	95.723	Cavia_aperea
ENSCGRG00000012105	Polr2a	98	91.569	ENSCPOG00000014812	-	88	95.143	Cavia_porcellus
ENSCGRG00000012105	Polr2a	99	95.747	ENSCCAG00000020938	-	96	95.493	Cebus_capucinus
ENSCGRG00000012105	Polr2a	99	95.003	ENSCATG00000013680	-	96	95.440	Cercocebus_atys
ENSCGRG00000012105	Polr2a	99	96.223	ENSCLAG00000012196	-	96	95.335	Chinchilla_lanigera
ENSCGRG00000012105	Polr2a	95	86.951	ENSCSAG00000011644	-	82	87.012	Chlorocebus_sabaeus
ENSCGRG00000012105	Polr2a	100	91.457	ENSCPBG00000012697	POLR2A	94	94.499	Chrysemys_picta_bellii
ENSCGRG00000012105	Polr2a	88	74.437	ENSCING00000007884	-	88	74.739	Ciona_intestinalis
ENSCGRG00000012105	Polr2a	89	83.333	ENSCSAVG00000008334	-	92	73.786	Ciona_savignyi
ENSCGRG00000012105	Polr2a	99	94.254	ENSCANG00000010622	-	96	94.759	Colobus_angolensis_palliatus
ENSCGRG00000012105	Polr2a	100	95.904	ENSCGRG00001003538	Polr2a	95	95.904	Cricetulus_griseus_chok1gshd
ENSCGRG00000012105	Polr2a	93	90.074	ENSCSEG00000002635	polr2a	82	90.268	Cynoglossus_semilaevis
ENSCGRG00000012105	Polr2a	93	90.748	ENSCVAG00000005156	polr2a	82	90.965	Cyprinodon_variegatus
ENSCGRG00000012105	Polr2a	93	90.748	ENSDARG00000099966	polr2a	82	90.736	Danio_rerio
ENSCGRG00000012105	Polr2a	100	92.662	ENSDNOG00000016482	-	96	92.400	Dasypus_novemcinctus
ENSCGRG00000012105	Polr2a	99	95.747	ENSDORG00000008667	Polr2a	96	95.493	Dipodomys_ordii
ENSCGRG00000012105	Polr2a	94	89.832	ENSETEG00000002540	-	79	90.948	Echinops_telfairi
ENSCGRG00000012105	Polr2a	86	85.083	ENSEBUG00000013967	polr2a	82	85.099	Eptatretus_burgeri
ENSCGRG00000012105	Polr2a	100	91.847	ENSEASG00005019114	-	97	93.993	Equus_asinus_asinus
ENSCGRG00000012105	Polr2a	95	96.012	ENSECAG00000018485	POLR2A	96	95.440	Equus_caballus
ENSCGRG00000012105	Polr2a	91	99.800	ENSEEUG00000001154	-	95	99.800	Erinaceus_europaeus
ENSCGRG00000012105	Polr2a	93	89.288	ENSELUG00000014284	polr2a	84	89.275	Esox_lucius
ENSCGRG00000012105	Polr2a	99	95.853	ENSFDAG00000008287	-	96	95.853	Fukomys_damarensis
ENSCGRG00000012105	Polr2a	90	90.748	ENSFHEG00000001768	polr2a	84	90.965	Fundulus_heteroclitus
ENSCGRG00000012105	Polr2a	95	87.448	ENSGMOG00000007725	polr2a	95	90.006	Gadus_morhua
ENSCGRG00000012105	Polr2a	99	89.313	ENSGAFG00000005389	polr2a	97	85.174	Gambusia_affinis
ENSCGRG00000012105	Polr2a	100	95.515	ENSGGOG00000014800	-	96	98.173	Gorilla_gorilla
ENSCGRG00000012105	Polr2a	99	95.694	ENSHGLG00000012381	POLR2A	96	95.440	Heterocephalus_glaber_female
ENSCGRG00000012105	Polr2a	99	95.694	ENSHGLG00100014843	POLR2A	96	95.440	Heterocephalus_glaber_male
ENSCGRG00000012105	Polr2a	93	90.196	ENSHCOG00000011874	polr2a	82	90.184	Hippocampus_comes
ENSCGRG00000012105	Polr2a	93	90.441	ENSIPUG00000002613	Polr2a	82	90.429	Ictalurus_punctatus
ENSCGRG00000012105	Polr2a	99	95.747	ENSSTOG00000001304	-	96	95.493	Ictidomys_tridecemlineatus
ENSCGRG00000012105	Polr2a	100	96.543	ENSJJAG00000013049	Polr2a	96	96.543	Jaculus_jaculus
ENSCGRG00000012105	Polr2a	85	82.550	ENSKMAG00000016343	polr2a	85	82.898	Kryptolebias_marmoratus
ENSCGRG00000012105	Polr2a	93	90.441	ENSLBEG00000027652	polr2a	82	90.643	Labrus_bergylta
ENSCGRG00000012105	Polr2a	98	83.500	ENSLACG00000012071	POLR2A	81	83.552	Latimeria_chalumnae
ENSCGRG00000012105	Polr2a	89	88.443	ENSLOCG00000013863	polr2a	86	90.792	Lepisosteus_oculatus
ENSCGRG00000012105	Polr2a	100	91.143	ENSLAFG00000008626	-	96	95.440	Loxodonta_africana
ENSCGRG00000012105	Polr2a	52	98.366	ENSMFAG00000007042	-	99	98.366	Macaca_fascicularis
ENSCGRG00000012105	Polr2a	99	95.694	ENSMMUG00000023620	-	96	95.440	Macaca_mulatta
ENSCGRG00000012105	Polr2a	97	95.506	ENSMNEG00000040407	-	81	95.644	Macaca_nemestrina
ENSCGRG00000012105	Polr2a	97	89.881	ENSMLEG00000030263	-	99	98.366	Mandrillus_leucophaeus
ENSCGRG00000012105	Polr2a	93	90.564	ENSMAMG00000003351	polr2a	82	90.552	Mastacembelus_armatus
ENSCGRG00000012105	Polr2a	93	90.564	ENSMZEG00005021429	polr2a	82	90.596	Maylandia_zebra
ENSCGRG00000012105	Polr2a	52	100.000	ENSMAUG00000021055	-	99	100.000	Mesocricetus_auratus
ENSCGRG00000012105	Polr2a	99	94.899	ENSMICG00000013372	-	98	98.772	Microcebus_murinus
ENSCGRG00000012105	Polr2a	100	93.843	ENSMOCG00000018279	Polr2a	100	90.909	Microtus_ochrogaster
ENSCGRG00000012105	Polr2a	89	90.135	ENSMMOG00000012515	polr2a	86	86.170	Mola_mola
ENSCGRG00000012105	Polr2a	95	95.521	ENSMODG00000007009	-	96	95.021	Monodelphis_domestica
ENSCGRG00000012105	Polr2a	93	90.920	ENSMALG00000008716	polr2a	86	90.954	Monopterus_albus
ENSCGRG00000012105	Polr2a	99	95.747	MGP_CAROLIEiJ_G0016587	Polr2a	96	95.493	Mus_caroli
ENSCGRG00000012105	Polr2a	99	95.747	ENSMUSG00000005198	Polr2a	96	95.493	Mus_musculus
ENSCGRG00000012105	Polr2a	95	93.891	MGP_PahariEiJ_G0017718	Polr2a	96	93.629	Mus_pahari
ENSCGRG00000012105	Polr2a	99	95.747	MGP_SPRETEiJ_G0017423	Polr2a	96	95.493	Mus_spretus
ENSCGRG00000012105	Polr2a	95	95.951	ENSMPUG00000009648	-	96	95.388	Mustela_putorius_furo
ENSCGRG00000012105	Polr2a	95	95.466	ENSMLUG00000009088	-	82	95.527	Myotis_lucifugus
ENSCGRG00000012105	Polr2a	99	95.747	ENSNGAG00000002543	Polr2a	96	95.493	Nannospalax_galili
ENSCGRG00000012105	Polr2a	85	90.960	ENSNBRG00000002005	polr2a	81	90.949	Neolamprologus_brichardi
ENSCGRG00000012105	Polr2a	100	96.148	ENSNLEG00000009460	-	96	96.148	Nomascus_leucogenys
ENSCGRG00000012105	Polr2a	93	99.455	ENSMEUG00000008611	-	92	99.455	Notamacropus_eugenii
ENSCGRG00000012105	Polr2a	85	96.271	ENSOPRG00000015116	-	100	96.271	Ochotona_princeps
ENSCGRG00000012105	Polr2a	92	99.667	ENSODEG00000017674	-	95	94.521	Octodon_degus
ENSCGRG00000012105	Polr2a	93	90.748	ENSONIG00000009231	polr2a	82	90.781	Oreochromis_niloticus
ENSCGRG00000012105	Polr2a	97	92.325	ENSOCUG00000017929	-	93	96.012	Oryctolagus_cuniculus
ENSCGRG00000012105	Polr2a	93	90.564	ENSORLG00000006431	polr2a	82	90.596	Oryzias_latipes
ENSCGRG00000012105	Polr2a	93	90.564	ENSORLG00020010235	polr2a	82	90.596	Oryzias_latipes_hni
ENSCGRG00000012105	Polr2a	93	90.564	ENSORLG00015007075	polr2a	82	90.596	Oryzias_latipes_hsok
ENSCGRG00000012105	Polr2a	97	90.663	ENSOMEG00000010713	polr2a	99	92.129	Oryzias_melastigma
ENSCGRG00000012105	Polr2a	95	95.890	ENSOGAG00000033608	-	96	95.335	Otolemur_garnettii
ENSCGRG00000012105	Polr2a	99	95.914	ENSOARG00000013874	-	100	95.652	Ovis_aries
ENSCGRG00000012105	Polr2a	99	95.109	ENSPPAG00000043734	-	95	95.109	Pan_paniscus
ENSCGRG00000012105	Polr2a	100	96.148	ENSPTRG00000008691	POLR2A	96	96.148	Pan_troglodytes
ENSCGRG00000012105	Polr2a	99	95.003	ENSPANG00000024099	-	96	94.759	Papio_anubis
ENSCGRG00000012105	Polr2a	82	92.620	ENSPKIG00000005727	polr2a	82	80.868	Paramormyrops_kingsleyae
ENSCGRG00000012105	Polr2a	98	92.019	ENSPSIG00000014006	POLR2A	98	92.770	Pelodiscus_sinensis
ENSCGRG00000012105	Polr2a	100	90.715	ENSPMGG00000019734	polr2a	97	91.079	Periophthalmus_magnuspinnatus
ENSCGRG00000012105	Polr2a	99	95.747	ENSPEMG00000012521	Polr2a	96	95.493	Peromyscus_maniculatus_bairdii
ENSCGRG00000012105	Polr2a	85	95.524	ENSPCIG00000028851	-	82	95.583	Phascolarctos_cinereus
ENSCGRG00000012105	Polr2a	85	90.870	ENSPFOG00000007890	polr2a	84	90.904	Poecilia_formosa
ENSCGRG00000012105	Polr2a	85	90.870	ENSPLAG00000007399	polr2a	84	90.904	Poecilia_latipinna
ENSCGRG00000012105	Polr2a	85	91.028	ENSPMEG00000002071	polr2a	84	91.017	Poecilia_mexicana
ENSCGRG00000012105	Polr2a	93	90.625	ENSPREG00000013122	polr2a	82	90.842	Poecilia_reticulata
ENSCGRG00000012105	Polr2a	85	96.074	ENSPPYG00000007924	-	82	96.135	Pongo_abelii
ENSCGRG00000012105	Polr2a	86	99.868	ENSPCAG00000006951	-	74	99.868	Procavia_capensis
ENSCGRG00000012105	Polr2a	100	94.844	ENSPCOG00000025260	-	95	95.694	Propithecus_coquereli
ENSCGRG00000012105	Polr2a	95	95.767	ENSPVAG00000005069	-	96	95.231	Pteropus_vampyrus
ENSCGRG00000012105	Polr2a	93	90.625	ENSPNYG00000022340	polr2a	82	90.658	Pundamilia_nyererei
ENSCGRG00000012105	Polr2a	93	91.054	ENSPNAG00000011237	polr2a	82	91.043	Pygocentrus_nattereri
ENSCGRG00000012105	Polr2a	95	96.012	ENSRNOG00000028834	Polr2a	96	95.440	Rattus_norvegicus
ENSCGRG00000012105	Polr2a	85	96.248	ENSRBIG00000002471	-	83	96.310	Rhinopithecus_bieti
ENSCGRG00000012105	Polr2a	85	96.481	ENSRROG00000029583	-	83	96.095	Rhinopithecus_roxellana
ENSCGRG00000012105	Polr2a	87	88.000	YDL140C	RPO21	92	50.183	Saccharomyces_cerevisiae
ENSCGRG00000012105	Polr2a	99	95.747	ENSSBOG00000000808	-	96	95.493	Saimiri_boliviensis_boliviensis
ENSCGRG00000012105	Polr2a	85	95.521	ENSSHAG00000002858	-	84	95.583	Sarcophilus_harrisii
ENSCGRG00000012105	Polr2a	93	90.809	ENSSFOG00015023275	polr2a	82	90.798	Scleropages_formosus
ENSCGRG00000012105	Polr2a	93	90.257	ENSSMAG00000009137	polr2a	83	89.897	Scophthalmus_maximus
ENSCGRG00000012105	Polr2a	93	90.686	ENSSDUG00000020466	polr2a	82	90.675	Seriola_dumerili
ENSCGRG00000012105	Polr2a	93	90.686	ENSSLDG00000020613	polr2a	82	90.675	Seriola_lalandi_dorsalis
ENSCGRG00000012105	Polr2a	97	91.366	ENSSARG00000005875	-	99	91.048	Sorex_araneus
ENSCGRG00000012105	Polr2a	97	90.462	ENSSPAG00000016741	polr2a	82	90.736	Stegastes_partitus
ENSCGRG00000012105	Polr2a	95	95.153	ENSSSCG00000028278	-	82	95.215	Sus_scrofa
ENSCGRG00000012105	Polr2a	97	85.052	ENSTRUG00000012320	polr2a	80	85.031	Takifugu_rubripes
ENSCGRG00000012105	Polr2a	99	89.277	ENSTNIG00000010136	polr2a	93	89.264	Tetraodon_nigroviridis
ENSCGRG00000012105	Polr2a	72	100.000	ENSTBEG00000013294	-	53	100.000	Tupaia_belangeri
ENSCGRG00000012105	Polr2a	95	94.172	ENSTTRG00000014273	-	82	94.233	Tursiops_truncatus
ENSCGRG00000012105	Polr2a	96	96.499	ENSUAMG00000014866	-	100	94.031	Ursus_americanus
ENSCGRG00000012105	Polr2a	99	89.150	ENSUMAG00000015732	-	95	89.150	Ursus_maritimus
ENSCGRG00000012105	Polr2a	56	100.000	ENSVPAG00000008842	-	56	100.000	Vicugna_pacos
ENSCGRG00000012105	Polr2a	85	96.012	ENSVVUG00000027878	-	83	96.074	Vulpes_vulpes
ENSCGRG00000012105	Polr2a	84	93.035	ENSXETG00000012465	polr2a	82	93.097	Xenopus_tropicalis
ENSCGRG00000012105	Polr2a	85	90.966	ENSXCOG00000001804	polr2a	88	90.954	Xiphophorus_couchianus
ENSCGRG00000012105	Polr2a	93	90.625	ENSXMAG00000015687	polr2a	82	90.842	Xiphophorus_maculatus