EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000012277 (Gene tree)
Gene ID: -
Gene Symbol: Snd1
Alias: Tudor-SN|p100 co-activator
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 369772 bases
Position: chrJH000073.1:706228-1075999
Accession: 100773866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000016878	TUDOR	PF00567.24	2.4e-28	1	1
ENSCGRP00000016878	SNase	PF00565.17	1.2e-68	1	5
ENSCGRP00000016878	SNase	PF00565.17	1.2e-68	2	5
ENSCGRP00000016878	SNase	PF00565.17	1.2e-68	3	5
ENSCGRP00000016878	SNase	PF00565.17	1.2e-68	4	5
ENSCGRP00000016878	SNase	PF00565.17	1.2e-68	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000017127	-	2664	XM_007613783	ENSCGRP00000016878	887 (aa)	XP_007611973	-

Gene Model

Click here to download ENSCGRG00000012277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000012277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000012277	Snd1	99	97.172	ENSG00000197157	SND1	97	97.172	Homo_sapiens
ENSCGRG00000012277	Snd1	99	84.424	ENSAPOG00000017599	snd1	97	84.424	Acanthochromis_polyacanthus
ENSCGRG00000012277	Snd1	99	97.065	ENSAMEG00000004664	SND1	92	97.065	Ailuropoda_melanoleuca
ENSCGRG00000012277	Snd1	99	81.808	ENSACIG00000003551	snd1	97	81.808	Amphilophus_citrinellus
ENSCGRG00000012277	Snd1	99	84.312	ENSAOCG00000014166	snd1	97	84.312	Amphiprion_ocellaris
ENSCGRG00000012277	Snd1	99	84.312	ENSAPEG00000007067	snd1	97	84.312	Amphiprion_percula
ENSCGRG00000012277	Snd1	98	83.774	ENSATEG00000018475	snd1	87	83.774	Anabas_testudineus
ENSCGRG00000012277	Snd1	99	97.511	ENSANAG00000034463	SND1	99	97.511	Aotus_nancymaae
ENSCGRG00000012277	Snd1	99	84.086	ENSACLG00000022897	snd1	97	84.086	Astatotilapia_calliptera
ENSCGRG00000012277	Snd1	99	84.459	ENSAMXG00000016318	snd1	97	84.459	Astyanax_mexicanus
ENSCGRG00000012277	Snd1	99	97.398	ENSBTAG00000010692	SND1	97	97.398	Bos_taurus
ENSCGRG00000012277	Snd1	99	46.607	WBGene00006626	tsn-1	97	46.719	Caenorhabditis_elegans
ENSCGRG00000012277	Snd1	99	97.059	ENSCJAG00000017668	SND1	99	97.059	Callithrix_jacchus
ENSCGRG00000012277	Snd1	99	97.398	ENSCAFG00000001700	SND1	97	97.398	Canis_familiaris
ENSCGRG00000012277	Snd1	99	97.398	ENSCAFG00020021639	SND1	97	97.398	Canis_lupus_dingo
ENSCGRG00000012277	Snd1	99	97.511	ENSCHIG00000023390	SND1	98	97.511	Capra_hircus
ENSCGRG00000012277	Snd1	75	97.711	ENSTSYG00000004979	SND1	96	97.711	Carlito_syrichta
ENSCGRG00000012277	Snd1	99	84.797	ENSCAPG00000010677	SND1	98	84.797	Cavia_aperea
ENSCGRG00000012277	Snd1	99	97.059	ENSCPOG00000006251	SND1	97	97.059	Cavia_porcellus
ENSCGRG00000012277	Snd1	99	97.398	ENSCCAG00000036847	SND1	98	97.398	Cebus_capucinus
ENSCGRG00000012277	Snd1	99	97.285	ENSCATG00000035214	SND1	99	97.285	Cercocebus_atys
ENSCGRG00000012277	Snd1	99	97.285	ENSCLAG00000011796	SND1	97	97.285	Chinchilla_lanigera
ENSCGRG00000012277	Snd1	99	97.285	ENSCSAG00000010182	SND1	97	97.285	Chlorocebus_sabaeus
ENSCGRG00000012277	Snd1	79	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSCGRG00000012277	Snd1	99	91.516	ENSCPBG00000018094	SND1	97	91.516	Chrysemys_picta_bellii
ENSCGRG00000012277	Snd1	99	56.459	ENSCING00000000524	-	97	56.459	Ciona_intestinalis
ENSCGRG00000012277	Snd1	99	57.705	ENSCSAVG00000008807	-	97	57.705	Ciona_savignyi
ENSCGRG00000012277	Snd1	99	97.285	ENSCANG00000035119	SND1	97	97.285	Colobus_angolensis_palliatus
ENSCGRG00000012277	Snd1	99	100.000	ENSCGRG00001022514	Snd1	97	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000012277	Snd1	99	83.747	ENSCSEG00000008661	snd1	97	83.747	Cynoglossus_semilaevis
ENSCGRG00000012277	Snd1	99	84.650	ENSCVAG00000010316	snd1	100	83.103	Cyprinodon_variegatus
ENSCGRG00000012277	Snd1	99	85.006	ENSDARG00000006766	snd1	95	87.684	Danio_rerio
ENSCGRG00000012277	Snd1	99	94.470	ENSDNOG00000006795	SND1	99	94.470	Dasypus_novemcinctus
ENSCGRG00000012277	Snd1	99	97.851	ENSDORG00000000336	Snd1	97	97.851	Dipodomys_ordii
ENSCGRG00000012277	Snd1	99	50.768	FBgn0035121	Tudor-SN	97	50.768	Drosophila_melanogaster
ENSCGRG00000012277	Snd1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSCGRG00000012277	Snd1	66	66.404	ENSEBUG00000014201	-	84	76.503	Eptatretus_burgeri
ENSCGRG00000012277	Snd1	99	95.667	ENSEASG00005008513	SND1	97	95.667	Equus_asinus_asinus
ENSCGRG00000012277	Snd1	99	97.285	ENSECAG00000011451	SND1	97	97.285	Equus_caballus
ENSCGRG00000012277	Snd1	99	86.086	ENSEEUG00000014737	SND1	97	86.086	Erinaceus_europaeus
ENSCGRG00000012277	Snd1	99	82.957	ENSELUG00000001805	snd1	94	82.957	Esox_lucius
ENSCGRG00000012277	Snd1	99	97.398	ENSFCAG00000008289	SND1	97	97.398	Felis_catus
ENSCGRG00000012277	Snd1	99	97.285	ENSFDAG00000015881	SND1	97	97.285	Fukomys_damarensis
ENSCGRG00000012277	Snd1	99	82.340	ENSFHEG00000004093	snd1	96	84.118	Fundulus_heteroclitus
ENSCGRG00000012277	Snd1	70	73.446	ENSGMOG00000018932	snd1	63	73.446	Gadus_morhua
ENSCGRG00000012277	Snd1	99	84.650	ENSGAFG00000008421	snd1	99	84.650	Gambusia_affinis
ENSCGRG00000012277	Snd1	99	54.129	ENSGACG00000019793	snd1	97	54.129	Gasterosteus_aculeatus
ENSCGRG00000012277	Snd1	99	97.285	ENSGGOG00000009614	SND1	99	97.285	Gorilla_gorilla
ENSCGRG00000012277	Snd1	99	84.086	ENSHBUG00000019135	snd1	97	84.086	Haplochromis_burtoni
ENSCGRG00000012277	Snd1	99	96.833	ENSHGLG00000003618	SND1	97	96.833	Heterocephalus_glaber_female
ENSCGRG00000012277	Snd1	99	96.833	ENSHGLG00100012449	SND1	98	96.833	Heterocephalus_glaber_male
ENSCGRG00000012277	Snd1	99	83.521	ENSHCOG00000005266	snd1	97	83.521	Hippocampus_comes
ENSCGRG00000012277	Snd1	99	83.446	ENSIPUG00000013279	snd1	97	83.446	Ictalurus_punctatus
ENSCGRG00000012277	Snd1	99	97.624	ENSSTOG00000002140	SND1	97	97.624	Ictidomys_tridecemlineatus
ENSCGRG00000012277	Snd1	99	97.851	ENSJJAG00000009561	Snd1	97	97.851	Jaculus_jaculus
ENSCGRG00000012277	Snd1	99	84.424	ENSKMAG00000016997	snd1	97	84.424	Kryptolebias_marmoratus
ENSCGRG00000012277	Snd1	99	85.965	ENSLBEG00000013563	snd1	97	83.070	Labrus_bergylta
ENSCGRG00000012277	Snd1	99	84.899	ENSLOCG00000015537	snd1	97	84.899	Lepisosteus_oculatus
ENSCGRG00000012277	Snd1	99	96.719	ENSLAFG00000009696	SND1	97	96.719	Loxodonta_africana
ENSCGRG00000012277	Snd1	99	97.285	ENSMFAG00000038114	SND1	99	97.285	Macaca_fascicularis
ENSCGRG00000012277	Snd1	99	97.285	ENSMMUG00000015432	SND1	97	97.285	Macaca_mulatta
ENSCGRG00000012277	Snd1	99	97.285	ENSMNEG00000039808	SND1	99	97.285	Macaca_nemestrina
ENSCGRG00000012277	Snd1	99	97.172	ENSMLEG00000029040	SND1	99	97.172	Mandrillus_leucophaeus
ENSCGRG00000012277	Snd1	99	84.312	ENSMAMG00000011739	snd1	97	84.312	Mastacembelus_armatus
ENSCGRG00000012277	Snd1	99	84.086	ENSMZEG00005005681	snd1	97	84.086	Maylandia_zebra
ENSCGRG00000012277	Snd1	99	97.398	ENSMICG00000000097	SND1	97	97.398	Microcebus_murinus
ENSCGRG00000012277	Snd1	99	98.869	ENSMOCG00000005040	Snd1	97	98.869	Microtus_ochrogaster
ENSCGRG00000012277	Snd1	99	84.312	ENSMMOG00000001795	snd1	97	84.312	Mola_mola
ENSCGRG00000012277	Snd1	99	94.570	ENSMODG00000015182	SND1	97	94.570	Monodelphis_domestica
ENSCGRG00000012277	Snd1	99	83.860	ENSMALG00000012071	snd1	97	83.860	Monopterus_albus
ENSCGRG00000012277	Snd1	99	98.529	MGP_CAROLIEiJ_G0028159	Snd1	97	98.529	Mus_caroli
ENSCGRG00000012277	Snd1	99	98.303	ENSMUSG00000001424	Snd1	97	98.303	Mus_musculus
ENSCGRG00000012277	Snd1	99	98.756	MGP_PahariEiJ_G0021917	Snd1	97	98.756	Mus_pahari
ENSCGRG00000012277	Snd1	99	98.529	MGP_SPRETEiJ_G0029159	Snd1	97	98.529	Mus_spretus
ENSCGRG00000012277	Snd1	99	97.398	ENSMPUG00000006545	SND1	97	97.398	Mustela_putorius_furo
ENSCGRG00000012277	Snd1	99	95.759	ENSMLUG00000017130	SND1	100	95.759	Myotis_lucifugus
ENSCGRG00000012277	Snd1	99	98.077	ENSNGAG00000011186	Snd1	97	98.077	Nannospalax_galili
ENSCGRG00000012277	Snd1	99	83.973	ENSNBRG00000006681	snd1	97	83.973	Neolamprologus_brichardi
ENSCGRG00000012277	Snd1	99	97.285	ENSNLEG00000012263	SND1	99	97.285	Nomascus_leucogenys
ENSCGRG00000012277	Snd1	92	100.000	ENSOPRG00000013405	SND1	90	100.000	Ochotona_princeps
ENSCGRG00000012277	Snd1	99	97.398	ENSODEG00000011502	SND1	97	97.398	Octodon_degus
ENSCGRG00000012277	Snd1	99	83.973	ENSONIG00000011481	snd1	95	83.973	Oreochromis_niloticus
ENSCGRG00000012277	Snd1	99	93.778	ENSOANG00000000817	SND1	97	93.778	Ornithorhynchus_anatinus
ENSCGRG00000012277	Snd1	99	96.154	ENSOCUG00000001620	SND1	97	96.154	Oryctolagus_cuniculus
ENSCGRG00000012277	Snd1	99	83.634	ENSORLG00000015201	snd1	97	83.634	Oryzias_latipes
ENSCGRG00000012277	Snd1	99	83.747	ENSORLG00020013991	snd1	97	83.747	Oryzias_latipes_hni
ENSCGRG00000012277	Snd1	99	83.747	ENSORLG00015012436	snd1	97	83.747	Oryzias_latipes_hsok
ENSCGRG00000012277	Snd1	99	84.086	ENSOMEG00000006406	snd1	97	84.086	Oryzias_melastigma
ENSCGRG00000012277	Snd1	99	96.953	ENSOGAG00000013356	SND1	92	96.953	Otolemur_garnettii
ENSCGRG00000012277	Snd1	99	94.796	ENSOARG00000002149	SND1	99	94.796	Ovis_aries
ENSCGRG00000012277	Snd1	99	97.172	ENSPPAG00000042947	SND1	99	97.172	Pan_paniscus
ENSCGRG00000012277	Snd1	99	97.398	ENSPPRG00000004494	SND1	97	97.398	Panthera_pardus
ENSCGRG00000012277	Snd1	99	97.285	ENSPTIG00000014214	SND1	97	97.285	Panthera_tigris_altaica
ENSCGRG00000012277	Snd1	99	97.172	ENSPTRG00000023911	SND1	99	97.172	Pan_troglodytes
ENSCGRG00000012277	Snd1	99	97.285	ENSPANG00000011997	SND1	99	97.285	Papio_anubis
ENSCGRG00000012277	Snd1	99	81.299	ENSPKIG00000023494	snd1	97	81.299	Paramormyrops_kingsleyae
ENSCGRG00000012277	Snd1	94	82.635	ENSPMGG00000003629	snd1	100	82.635	Periophthalmus_magnuspinnatus
ENSCGRG00000012277	Snd1	99	99.095	ENSPEMG00000010240	Snd1	97	99.095	Peromyscus_maniculatus_bairdii
ENSCGRG00000012277	Snd1	99	73.363	ENSPMAG00000007915	-	99	73.363	Petromyzon_marinus
ENSCGRG00000012277	Snd1	99	94.570	ENSPCIG00000011561	SND1	97	94.570	Phascolarctos_cinereus
ENSCGRG00000012277	Snd1	99	84.086	ENSPFOG00000001557	snd1	97	84.086	Poecilia_formosa
ENSCGRG00000012277	Snd1	99	84.086	ENSPLAG00000018459	snd1	94	84.086	Poecilia_latipinna
ENSCGRG00000012277	Snd1	99	84.537	ENSPMEG00000006803	snd1	97	84.537	Poecilia_mexicana
ENSCGRG00000012277	Snd1	99	84.424	ENSPREG00000002189	snd1	97	84.424	Poecilia_reticulata
ENSCGRG00000012277	Snd1	93	97.179	ENSPPYG00000017972	SND1	97	97.179	Pongo_abelii
ENSCGRG00000012277	Snd1	99	85.068	ENSPCAG00000011305	SND1	97	85.068	Procavia_capensis
ENSCGRG00000012277	Snd1	100	96.731	ENSPCOG00000026791	SND1	99	97.059	Propithecus_coquereli
ENSCGRG00000012277	Snd1	99	95.362	ENSPVAG00000013945	SND1	97	95.362	Pteropus_vampyrus
ENSCGRG00000012277	Snd1	99	84.086	ENSPNYG00000000932	snd1	97	84.086	Pundamilia_nyererei
ENSCGRG00000012277	Snd1	99	84.234	ENSPNAG00000001206	snd1	97	84.234	Pygocentrus_nattereri
ENSCGRG00000012277	Snd1	99	98.077	ENSRNOG00000031173	Snd1	99	96.719	Rattus_norvegicus
ENSCGRG00000012277	Snd1	75	97.928	ENSRBIG00000027782	-	93	97.909	Rhinopithecus_bieti
ENSCGRG00000012277	Snd1	99	97.285	ENSRROG00000033020	SND1	97	97.285	Rhinopithecus_roxellana
ENSCGRG00000012277	Snd1	99	97.398	ENSSBOG00000032461	SND1	99	97.398	Saimiri_boliviensis_boliviensis
ENSCGRG00000012277	Snd1	100	91.545	ENSSHAG00000015359	SND1	99	91.545	Sarcophilus_harrisii
ENSCGRG00000012277	Snd1	99	82.979	ENSSFOG00015001103	snd1	97	82.979	Scleropages_formosus
ENSCGRG00000012277	Snd1	99	83.634	ENSSMAG00000001932	snd1	92	83.634	Scophthalmus_maximus
ENSCGRG00000012277	Snd1	99	84.312	ENSSDUG00000002699	snd1	91	84.312	Seriola_dumerili
ENSCGRG00000012277	Snd1	99	76.862	ENSSLDG00000001950	snd1	97	76.862	Seriola_lalandi_dorsalis
ENSCGRG00000012277	Snd1	88	98.113	ENSSARG00000004877	SND1	92	98.113	Sorex_araneus
ENSCGRG00000012277	Snd1	75	86.087	ENSSPUG00000017586	SND1	96	86.087	Sphenodon_punctatus
ENSCGRG00000012277	Snd1	72	86.195	ENSSPAG00000021398	snd1	94	86.195	Stegastes_partitus
ENSCGRG00000012277	Snd1	99	96.946	ENSSSCG00000016590	SND1	97	96.946	Sus_scrofa
ENSCGRG00000012277	Snd1	99	85.098	ENSTRUG00000014067	snd1	97	83.296	Takifugu_rubripes
ENSCGRG00000012277	Snd1	99	83.973	ENSTNIG00000011019	snd1	94	87.040	Tetraodon_nigroviridis
ENSCGRG00000012277	Snd1	96	91.745	ENSTBEG00000003999	SND1	100	91.745	Tupaia_belangeri
ENSCGRG00000012277	Snd1	99	92.534	ENSTTRG00000006059	SND1	97	92.534	Tursiops_truncatus
ENSCGRG00000012277	Snd1	88	97.148	ENSUAMG00000005604	-	93	97.148	Ursus_americanus
ENSCGRG00000012277	Snd1	69	88.022	ENSUAMG00000002820	-	83	88.022	Ursus_americanus
ENSCGRG00000012277	Snd1	99	97.398	ENSUMAG00000005960	SND1	97	97.398	Ursus_maritimus
ENSCGRG00000012277	Snd1	79	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSCGRG00000012277	Snd1	99	97.172	ENSVVUG00000007226	SND1	97	97.172	Vulpes_vulpes
ENSCGRG00000012277	Snd1	99	83.973	ENSXETG00000023043	snd1	100	83.982	Xenopus_tropicalis
ENSCGRG00000012277	Snd1	95	80.879	ENSXCOG00000013629	snd1	99	80.879	Xiphophorus_couchianus
ENSCGRG00000012277	Snd1	99	84.650	ENSXMAG00000011469	snd1	97	84.650	Xiphophorus_maculatus