EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000012416 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf2
Alias: 100kDa|2610024B04Rik|Cpsf
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 31594 bases
Position: chrJH001076.1:500364-531957
Accession: 100753441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000017068	Beta-Casp	PF10996.8	8.6e-21	1	1
ENSCGRP00000017069	Beta-Casp	PF10996.8	8.6e-21	1	1
ENSCGRP00000017068	Lactamase_B	PF00753.27	5.7e-06	1	1
ENSCGRP00000017069	Lactamase_B	PF00753.27	5.7e-06	1	1
ENSCGRP00000017068	RMMBL	PF07521.12	1.1e-15	1	1
ENSCGRP00000017069	RMMBL	PF07521.12	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000017318	-	6047	XM_007635597	ENSCGRP00000017068	782 (aa)	XP_007633787	UPI00022F5E54
ENSCGRT00000017319	-	6062	-	ENSCGRP00000017069	782 (aa)	-	UPI00022F5E54

Gene Model

Click here to download ENSCGRG00000012416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000012416's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000012416	Cpsf2	100	98.465	ENSG00000165934	CPSF2	100	98.750	Homo_sapiens
ENSCGRG00000012416	Cpsf2	100	85.551	ENSAPOG00000001242	cpsf2	100	85.551	Acanthochromis_polyacanthus
ENSCGRG00000012416	Cpsf2	100	85.696	ENSACIG00000009331	cpsf2	100	85.696	Amphilophus_citrinellus
ENSCGRG00000012416	Cpsf2	100	85.678	ENSAOCG00000014095	cpsf2	100	85.678	Amphiprion_ocellaris
ENSCGRG00000012416	Cpsf2	100	85.678	ENSAPEG00000009158	cpsf2	100	85.678	Amphiprion_percula
ENSCGRG00000012416	Cpsf2	96	85.789	ENSATEG00000017644	cpsf2	100	83.973	Anabas_testudineus
ENSCGRG00000012416	Cpsf2	100	95.924	ENSAPLG00000006330	CPSF2	100	95.924	Anas_platyrhynchos
ENSCGRG00000012416	Cpsf2	100	95.275	ENSACAG00000009245	CPSF2	100	95.275	Anolis_carolinensis
ENSCGRG00000012416	Cpsf2	100	98.465	ENSANAG00000022915	CPSF2	100	98.465	Aotus_nancymaae
ENSCGRG00000012416	Cpsf2	100	85.260	ENSAMXG00000018696	cpsf2	100	85.260	Astyanax_mexicanus
ENSCGRG00000012416	Cpsf2	100	98.721	ENSBTAG00000010227	CPSF2	100	98.721	Bos_taurus
ENSCGRG00000012416	Cpsf2	100	41.920	WBGene00017313	cpsf-2	100	41.726	Caenorhabditis_elegans
ENSCGRG00000012416	Cpsf2	100	98.465	ENSCJAG00000018069	CPSF2	100	98.465	Callithrix_jacchus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSCAFG00000010909	CPSF2	100	98.593	Canis_familiaris
ENSCGRG00000012416	Cpsf2	100	98.593	ENSCAFG00020020670	CPSF2	100	98.593	Canis_lupus_dingo
ENSCGRG00000012416	Cpsf2	100	98.721	ENSCHIG00000023848	CPSF2	100	98.721	Capra_hircus
ENSCGRG00000012416	Cpsf2	100	98.210	ENSTSYG00000009036	CPSF2	100	98.210	Carlito_syrichta
ENSCGRG00000012416	Cpsf2	100	98.721	ENSCPOG00000010899	CPSF2	100	98.721	Cavia_porcellus
ENSCGRG00000012416	Cpsf2	100	98.465	ENSCCAG00000028088	CPSF2	100	98.465	Cebus_capucinus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSCATG00000030132	CPSF2	100	98.593	Cercocebus_atys
ENSCGRG00000012416	Cpsf2	100	98.593	ENSCLAG00000012404	CPSF2	100	98.593	Chinchilla_lanigera
ENSCGRG00000012416	Cpsf2	100	98.593	ENSCSAG00000011300	CPSF2	100	98.593	Chlorocebus_sabaeus
ENSCGRG00000012416	Cpsf2	100	92.072	ENSCHOG00000012904	CPSF2	100	92.072	Choloepus_hoffmanni
ENSCGRG00000012416	Cpsf2	100	96.296	ENSCPBG00000008766	CPSF2	97	96.296	Chrysemys_picta_bellii
ENSCGRG00000012416	Cpsf2	100	54.919	ENSCING00000007881	-	100	54.795	Ciona_intestinalis
ENSCGRG00000012416	Cpsf2	94	98.497	ENSCANG00000041651	CPSF2	100	98.497	Colobus_angolensis_palliatus
ENSCGRG00000012416	Cpsf2	100	100.000	ENSCGRG00001006901	Cpsf2	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000012416	Cpsf2	100	83.397	ENSCSEG00000004116	cpsf2	100	83.397	Cynoglossus_semilaevis
ENSCGRG00000012416	Cpsf2	100	84.791	ENSCVAG00000000095	cpsf2	100	84.918	Cyprinodon_variegatus
ENSCGRG00000012416	Cpsf2	100	85.316	ENSDARG00000028971	cpsf2	100	85.316	Danio_rerio
ENSCGRG00000012416	Cpsf2	100	98.593	ENSDNOG00000042757	CPSF2	100	98.593	Dasypus_novemcinctus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSDORG00000013709	Cpsf2	100	98.593	Dipodomys_ordii
ENSCGRG00000012416	Cpsf2	100	53.300	FBgn0027873	Cpsf100	100	53.059	Drosophila_melanogaster
ENSCGRG00000012416	Cpsf2	100	89.655	ENSETEG00000012123	CPSF2	100	89.655	Echinops_telfairi
ENSCGRG00000012416	Cpsf2	52	75.980	ENSEBUG00000012098	cpsf2	93	75.980	Eptatretus_burgeri
ENSCGRG00000012416	Cpsf2	91	97.270	ENSEASG00005021193	CPSF2	100	97.270	Equus_asinus_asinus
ENSCGRG00000012416	Cpsf2	100	98.465	ENSECAG00000023935	CPSF2	100	98.465	Equus_caballus
ENSCGRG00000012416	Cpsf2	100	84.191	ENSELUG00000008442	cpsf2	100	84.191	Esox_lucius
ENSCGRG00000012416	Cpsf2	100	98.593	ENSFCAG00000007886	CPSF2	100	98.593	Felis_catus
ENSCGRG00000012416	Cpsf2	100	96.169	ENSFALG00000002412	CPSF2	100	96.169	Ficedula_albicollis
ENSCGRG00000012416	Cpsf2	100	98.593	ENSFDAG00000006327	CPSF2	100	98.593	Fukomys_damarensis
ENSCGRG00000012416	Cpsf2	96	84.314	ENSFHEG00000015465	cpsf2	98	84.706	Fundulus_heteroclitus
ENSCGRG00000012416	Cpsf2	100	83.207	ENSGMOG00000008761	cpsf2	100	83.207	Gadus_morhua
ENSCGRG00000012416	Cpsf2	100	95.402	ENSGALG00000010783	CPSF2	100	95.913	Gallus_gallus
ENSCGRG00000012416	Cpsf2	100	85.298	ENSGAFG00000001407	cpsf2	100	85.298	Gambusia_affinis
ENSCGRG00000012416	Cpsf2	100	84.157	ENSGACG00000008418	cpsf2	100	84.157	Gasterosteus_aculeatus
ENSCGRG00000012416	Cpsf2	100	96.424	ENSGAGG00000008287	CPSF2	100	96.424	Gopherus_agassizii
ENSCGRG00000012416	Cpsf2	100	98.465	ENSGGOG00000011799	CPSF2	100	98.465	Gorilla_gorilla
ENSCGRG00000012416	Cpsf2	100	84.791	ENSHBUG00000023466	cpsf2	100	84.791	Haplochromis_burtoni
ENSCGRG00000012416	Cpsf2	100	98.465	ENSHGLG00000018311	CPSF2	100	98.465	Heterocephalus_glaber_female
ENSCGRG00000012416	Cpsf2	100	98.465	ENSHGLG00100016460	CPSF2	100	98.465	Heterocephalus_glaber_male
ENSCGRG00000012416	Cpsf2	100	84.284	ENSHCOG00000019527	cpsf2	98	84.284	Hippocampus_comes
ENSCGRG00000012416	Cpsf2	100	85.133	ENSIPUG00000020857	cpsf2	100	85.133	Ictalurus_punctatus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSSTOG00000009528	CPSF2	100	98.593	Ictidomys_tridecemlineatus
ENSCGRG00000012416	Cpsf2	100	98.721	ENSJJAG00000017925	Cpsf2	100	98.721	Jaculus_jaculus
ENSCGRG00000012416	Cpsf2	100	84.537	ENSKMAG00000019429	cpsf2	100	84.537	Kryptolebias_marmoratus
ENSCGRG00000012416	Cpsf2	95	84.203	ENSLBEG00000011585	cpsf2	100	84.091	Labrus_bergylta
ENSCGRG00000012416	Cpsf2	100	89.655	ENSLACG00000019024	CPSF2	100	89.911	Latimeria_chalumnae
ENSCGRG00000012416	Cpsf2	100	87.326	ENSLOCG00000014102	cpsf2	100	87.326	Lepisosteus_oculatus
ENSCGRG00000012416	Cpsf2	100	98.214	ENSLAFG00000004891	CPSF2	100	98.214	Loxodonta_africana
ENSCGRG00000012416	Cpsf2	100	98.593	ENSMFAG00000041212	CPSF2	100	98.593	Macaca_fascicularis
ENSCGRG00000012416	Cpsf2	100	98.593	ENSMMUG00000000699	CPSF2	100	98.593	Macaca_mulatta
ENSCGRG00000012416	Cpsf2	100	98.593	ENSMNEG00000031584	CPSF2	100	98.593	Macaca_nemestrina
ENSCGRG00000012416	Cpsf2	100	98.593	ENSMLEG00000029394	CPSF2	100	98.593	Mandrillus_leucophaeus
ENSCGRG00000012416	Cpsf2	100	85.425	ENSMAMG00000004235	cpsf2	100	85.425	Mastacembelus_armatus
ENSCGRG00000012416	Cpsf2	100	84.918	ENSMZEG00005001769	cpsf2	100	84.918	Maylandia_zebra
ENSCGRG00000012416	Cpsf2	100	95.408	ENSMGAG00000013122	CPSF2	100	95.918	Meleagris_gallopavo
ENSCGRG00000012416	Cpsf2	100	99.872	ENSMAUG00000015160	Cpsf2	100	99.872	Mesocricetus_auratus
ENSCGRG00000012416	Cpsf2	100	98.721	ENSMICG00000016441	CPSF2	100	98.721	Microcebus_murinus
ENSCGRG00000012416	Cpsf2	100	99.744	ENSMOCG00000015372	Cpsf2	100	99.744	Microtus_ochrogaster
ENSCGRG00000012416	Cpsf2	100	80.608	ENSMMOG00000015590	cpsf2	100	80.608	Mola_mola
ENSCGRG00000012416	Cpsf2	100	98.465	ENSMODG00000002042	CPSF2	100	98.465	Monodelphis_domestica
ENSCGRG00000012416	Cpsf2	100	82.256	ENSMALG00000022275	cpsf2	100	82.256	Monopterus_albus
ENSCGRG00000012416	Cpsf2	100	98.721	ENSMUSG00000041781	Cpsf2	100	98.721	Mus_musculus
ENSCGRG00000012416	Cpsf2	100	98.977	MGP_PahariEiJ_G0029791	Cpsf2	100	98.977	Mus_pahari
ENSCGRG00000012416	Cpsf2	100	98.721	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.721	Mus_spretus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSMPUG00000007617	CPSF2	98	98.593	Mustela_putorius_furo
ENSCGRG00000012416	Cpsf2	100	98.338	ENSMLUG00000005570	CPSF2	100	98.338	Myotis_lucifugus
ENSCGRG00000012416	Cpsf2	100	98.977	ENSNGAG00000020312	Cpsf2	100	98.977	Nannospalax_galili
ENSCGRG00000012416	Cpsf2	100	85.298	ENSNBRG00000022402	cpsf2	100	85.298	Neolamprologus_brichardi
ENSCGRG00000012416	Cpsf2	100	97.826	ENSNLEG00000017132	CPSF2	100	97.826	Nomascus_leucogenys
ENSCGRG00000012416	Cpsf2	91	99.353	ENSMEUG00000008138	CPSF2	91	99.353	Notamacropus_eugenii
ENSCGRG00000012416	Cpsf2	94	90.984	ENSOPRG00000008484	-	100	90.984	Ochotona_princeps
ENSCGRG00000012416	Cpsf2	100	98.593	ENSODEG00000008682	CPSF2	100	98.593	Octodon_degus
ENSCGRG00000012416	Cpsf2	100	85.678	ENSONIG00000005901	cpsf2	100	85.678	Oreochromis_niloticus
ENSCGRG00000012416	Cpsf2	100	97.954	ENSOANG00000003822	CPSF2	100	97.954	Ornithorhynchus_anatinus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSOCUG00000005713	CPSF2	100	98.593	Oryctolagus_cuniculus
ENSCGRG00000012416	Cpsf2	100	79.721	ENSORLG00000011628	cpsf2	100	79.721	Oryzias_latipes
ENSCGRG00000012416	Cpsf2	100	84.411	ENSORLG00020016980	cpsf2	100	84.411	Oryzias_latipes_hni
ENSCGRG00000012416	Cpsf2	100	84.411	ENSORLG00015011910	cpsf2	100	84.411	Oryzias_latipes_hsok
ENSCGRG00000012416	Cpsf2	100	83.650	ENSOMEG00000022876	cpsf2	100	83.650	Oryzias_melastigma
ENSCGRG00000012416	Cpsf2	100	95.663	ENSOARG00000012889	CPSF2	100	95.663	Ovis_aries
ENSCGRG00000012416	Cpsf2	100	98.465	ENSPPAG00000039666	CPSF2	100	98.465	Pan_paniscus
ENSCGRG00000012416	Cpsf2	99	98.592	ENSPPRG00000010869	CPSF2	100	98.592	Panthera_pardus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSPTIG00000021202	CPSF2	100	98.593	Panthera_tigris_altaica
ENSCGRG00000012416	Cpsf2	100	98.465	ENSPTRG00000006651	CPSF2	100	98.465	Pan_troglodytes
ENSCGRG00000012416	Cpsf2	100	98.593	ENSPANG00000017417	CPSF2	100	98.593	Papio_anubis
ENSCGRG00000012416	Cpsf2	100	81.830	ENSPKIG00000021453	cpsf2	100	81.830	Paramormyrops_kingsleyae
ENSCGRG00000012416	Cpsf2	100	95.785	ENSPSIG00000006289	CPSF2	100	95.785	Pelodiscus_sinensis
ENSCGRG00000012416	Cpsf2	76	79.402	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSCGRG00000012416	Cpsf2	100	99.744	ENSPEMG00000007917	Cpsf2	100	99.744	Peromyscus_maniculatus_bairdii
ENSCGRG00000012416	Cpsf2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSCGRG00000012416	Cpsf2	100	98.465	ENSPCIG00000011393	CPSF2	100	98.465	Phascolarctos_cinereus
ENSCGRG00000012416	Cpsf2	100	85.171	ENSPFOG00000018648	cpsf2	100	85.171	Poecilia_formosa
ENSCGRG00000012416	Cpsf2	100	85.171	ENSPLAG00000019199	cpsf2	99	85.171	Poecilia_latipinna
ENSCGRG00000012416	Cpsf2	96	85.526	ENSPMEG00000012100	cpsf2	100	84.893	Poecilia_mexicana
ENSCGRG00000012416	Cpsf2	100	85.551	ENSPREG00000008960	cpsf2	100	85.551	Poecilia_reticulata
ENSCGRG00000012416	Cpsf2	63	97.782	ENSPPYG00000029685	-	100	97.782	Pongo_abelii
ENSCGRG00000012416	Cpsf2	100	98.338	ENSPCAG00000012477	CPSF2	100	98.338	Procavia_capensis
ENSCGRG00000012416	Cpsf2	100	98.465	ENSPCOG00000026387	CPSF2	100	98.465	Propithecus_coquereli
ENSCGRG00000012416	Cpsf2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSCGRG00000012416	Cpsf2	100	84.937	ENSPNYG00000023356	cpsf2	100	84.937	Pundamilia_nyererei
ENSCGRG00000012416	Cpsf2	100	86.277	ENSPNAG00000001849	cpsf2	100	86.277	Pygocentrus_nattereri
ENSCGRG00000012416	Cpsf2	100	98.849	ENSRNOG00000005733	Cpsf2	100	98.849	Rattus_norvegicus
ENSCGRG00000012416	Cpsf2	100	98.593	ENSRBIG00000044792	CPSF2	100	98.593	Rhinopithecus_bieti
ENSCGRG00000012416	Cpsf2	100	98.593	ENSRROG00000034875	CPSF2	100	98.593	Rhinopithecus_roxellana
ENSCGRG00000012416	Cpsf2	100	98.465	ENSSBOG00000024571	CPSF2	100	98.465	Saimiri_boliviensis_boliviensis
ENSCGRG00000012416	Cpsf2	100	98.465	ENSSHAG00000010458	CPSF2	100	98.465	Sarcophilus_harrisii
ENSCGRG00000012416	Cpsf2	100	86.785	ENSSFOG00015002117	cpsf2	100	86.785	Scleropages_formosus
ENSCGRG00000012416	Cpsf2	100	83.650	ENSSMAG00000002001	cpsf2	100	83.650	Scophthalmus_maximus
ENSCGRG00000012416	Cpsf2	100	85.805	ENSSDUG00000004084	cpsf2	100	85.805	Seriola_dumerili
ENSCGRG00000012416	Cpsf2	100	85.298	ENSSLDG00000024330	cpsf2	100	85.298	Seriola_lalandi_dorsalis
ENSCGRG00000012416	Cpsf2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSCGRG00000012416	Cpsf2	100	95.658	ENSSPUG00000013485	CPSF2	100	95.658	Sphenodon_punctatus
ENSCGRG00000012416	Cpsf2	100	84.791	ENSSPAG00000013284	cpsf2	100	84.791	Stegastes_partitus
ENSCGRG00000012416	Cpsf2	100	98.465	ENSSSCG00000002447	CPSF2	100	98.465	Sus_scrofa
ENSCGRG00000012416	Cpsf2	100	96.296	ENSTGUG00000012571	-	100	96.296	Taeniopygia_guttata
ENSCGRG00000012416	Cpsf2	100	84.284	ENSTRUG00000003742	cpsf2	100	84.284	Takifugu_rubripes
ENSCGRG00000012416	Cpsf2	100	83.059	ENSTNIG00000012228	cpsf2	100	83.818	Tetraodon_nigroviridis
ENSCGRG00000012416	Cpsf2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSCGRG00000012416	Cpsf2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSCGRG00000012416	Cpsf2	100	98.721	ENSUAMG00000028071	CPSF2	100	98.721	Ursus_americanus
ENSCGRG00000012416	Cpsf2	100	98.721	ENSUMAG00000005029	CPSF2	100	98.798	Ursus_maritimus
ENSCGRG00000012416	Cpsf2	99	98.592	ENSVPAG00000003503	CPSF2	100	98.592	Vicugna_pacos
ENSCGRG00000012416	Cpsf2	100	98.593	ENSVVUG00000024642	CPSF2	100	98.593	Vulpes_vulpes
ENSCGRG00000012416	Cpsf2	100	91.954	ENSXETG00000010289	cpsf2	100	91.954	Xenopus_tropicalis
ENSCGRG00000012416	Cpsf2	100	85.171	ENSXCOG00000001764	cpsf2	100	85.171	Xiphophorus_couchianus
ENSCGRG00000012416	Cpsf2	100	85.298	ENSXMAG00000017048	cpsf2	100	85.298	Xiphophorus_maculatus