EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000012479 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 3901 bases
Position: chrJH000969.1:625234-629134
Accession: 100773161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000017158	ResIII	PF04851.15	7.7e-08	1	1
ENSCGRP00000017158	DEAD	PF00270.29	4.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000017409	-	966	XM_007649102	ENSCGRP00000017158	321 (aa)	XP_007647292	-

Gene Model

Click here to download ENSCGRG00000012479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000012479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000012479	-	69	37.668	ENSCGRG00000007204	Eif4a1	54	37.668
ENSCGRG00000012479	-	62	36.500	ENSCGRG00000017848	-	52	36.683
ENSCGRG00000012479	-	61	36.041	ENSCGRG00000003437	-	51	36.041
ENSCGRG00000012479	-	76	88.571	ENSCGRG00000014915	Ddx39	57	88.571
ENSCGRG00000012479	-	56	39.227	ENSCGRG00000017119	-	50	39.227
ENSCGRG00000012479	-	62	41.500	ENSCGRG00000004555	Eif4a2	55	41.000
ENSCGRG00000012479	-	64	33.824	ENSCGRG00000001983	-	73	30.500
ENSCGRG00000012479	-	64	99.512	ENSCGRG00000000078	-	90	99.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000012479	-	76	99.184	ENSG00000198563	DDX39B	100	99.160	Homo_sapiens
ENSCGRG00000012479	-	76	98.776	ENSAMEG00000009508	DDX39B	57	98.776	Ailuropoda_melanoleuca
ENSCGRG00000012479	-	76	91.165	ENSACIG00000004534	ddx39b	57	91.165	Amphilophus_citrinellus
ENSCGRG00000012479	-	76	90.361	ENSATEG00000012366	ddx39b	58	90.361	Anabas_testudineus
ENSCGRG00000012479	-	76	95.510	ENSACAG00000012240	DDX39B	57	95.510	Anolis_carolinensis
ENSCGRG00000012479	-	76	99.184	ENSANAG00000030372	DDX39B	57	99.184	Aotus_nancymaae
ENSCGRG00000012479	-	76	89.286	ENSACLG00000018759	ddx39b	58	89.286	Astatotilapia_calliptera
ENSCGRG00000012479	-	76	89.328	ENSAMXG00000017837	ddx39b	58	89.328	Astyanax_mexicanus
ENSCGRG00000012479	-	76	98.776	ENSBTAG00000014490	DDX39B	57	98.776	Bos_taurus
ENSCGRG00000012479	-	76	99.184	ENSCJAG00000003152	DDX39B	57	99.184	Callithrix_jacchus
ENSCGRG00000012479	-	76	98.776	ENSCAFG00000000509	DDX39B	57	98.776	Canis_familiaris
ENSCGRG00000012479	-	76	98.776	ENSCAFG00020020530	DDX39B	57	98.776	Canis_lupus_dingo
ENSCGRG00000012479	-	76	98.776	ENSCHIG00000004579	DDX39B	57	98.776	Capra_hircus
ENSCGRG00000012479	-	74	88.608	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSCGRG00000012479	-	76	99.184	ENSTSYG00000010226	-	57	99.184	Carlito_syrichta
ENSCGRG00000012479	-	76	98.776	ENSCAPG00000010066	DDX39B	57	98.776	Cavia_aperea
ENSCGRG00000012479	-	76	98.776	ENSCPOG00000002335	DDX39B	57	98.776	Cavia_porcellus
ENSCGRG00000012479	-	76	99.184	ENSCCAG00000027897	DDX39B	58	99.184	Cebus_capucinus
ENSCGRG00000012479	-	76	92.245	ENSCATG00000043709	DDX39B	58	92.245	Cercocebus_atys
ENSCGRG00000012479	-	76	98.776	ENSCLAG00000014555	DDX39B	57	98.776	Chinchilla_lanigera
ENSCGRG00000012479	-	76	99.184	ENSCSAG00000008517	DDX39B	58	99.184	Chlorocebus_sabaeus
ENSCGRG00000012479	-	100	91.589	ENSCANG00000041217	DDX39B	97	91.277	Colobus_angolensis_palliatus
ENSCGRG00000012479	-	83	100.000	ENSCGRG00001017315	-	95	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000012479	-	76	88.492	ENSDARG00000036069	ddx39b	58	88.889	Danio_rerio
ENSCGRG00000012479	-	76	99.184	ENSDNOG00000010215	DDX39B	57	99.184	Dasypus_novemcinctus
ENSCGRG00000012479	-	76	98.776	ENSDORG00000004985	Ddx39b	66	98.776	Dipodomys_ordii
ENSCGRG00000012479	-	76	97.143	ENSETEG00000009649	DDX39B	57	97.143	Echinops_telfairi
ENSCGRG00000012479	-	76	99.184	ENSEASG00005017156	DDX39B	57	99.184	Equus_asinus_asinus
ENSCGRG00000012479	-	76	99.184	ENSECAG00000007750	DDX39B	58	99.184	Equus_caballus
ENSCGRG00000012479	-	76	88.306	ENSELUG00000017904	ddx39b	57	88.306	Esox_lucius
ENSCGRG00000012479	-	76	98.776	ENSFCAG00000004497	DDX39B	57	98.776	Felis_catus
ENSCGRG00000012479	-	76	98.776	ENSFDAG00000011074	DDX39B	57	98.776	Fukomys_damarensis
ENSCGRG00000012479	-	100	91.589	ENSGGOG00000005989	DDX39B	97	91.277	Gorilla_gorilla
ENSCGRG00000012479	-	64	88.517	ENSHBUG00000022054	-	77	88.517	Haplochromis_burtoni
ENSCGRG00000012479	-	76	97.959	ENSHGLG00000019248	DDX39B	57	97.959	Heterocephalus_glaber_female
ENSCGRG00000012479	-	76	97.959	ENSHGLG00100011850	DDX39B	57	97.959	Heterocephalus_glaber_male
ENSCGRG00000012479	-	81	83.643	ENSIPUG00000015733	DDX39B	61	87.795	Ictalurus_punctatus
ENSCGRG00000012479	-	76	98.367	ENSSTOG00000012838	DDX39B	57	98.367	Ictidomys_tridecemlineatus
ENSCGRG00000012479	-	76	98.776	ENSJJAG00000005660	-	57	98.776	Jaculus_jaculus
ENSCGRG00000012479	-	78	72.800	ENSLBEG00000012254	ddx39b	57	73.896	Labrus_bergylta
ENSCGRG00000012479	-	77	74.597	ENSLBEG00000017177	-	99	69.258	Labrus_bergylta
ENSCGRG00000012479	-	76	82.470	ENSLACG00000002110	DDX39B	58	82.470	Latimeria_chalumnae
ENSCGRG00000012479	-	82	95.420	ENSLAFG00000014202	DDX39B	95	98.790	Loxodonta_africana
ENSCGRG00000012479	-	100	91.589	ENSMFAG00000034233	DDX39B	97	91.277	Macaca_fascicularis
ENSCGRG00000012479	-	100	91.589	ENSMMUG00000008839	DDX39B	97	91.277	Macaca_mulatta
ENSCGRG00000012479	-	100	91.589	ENSMNEG00000041059	DDX39B	97	91.277	Macaca_nemestrina
ENSCGRG00000012479	-	100	91.589	ENSMLEG00000043791	DDX39B	97	91.277	Mandrillus_leucophaeus
ENSCGRG00000012479	-	76	89.286	ENSMZEG00005017654	ddx39b	58	89.286	Maylandia_zebra
ENSCGRG00000012479	-	76	100.000	ENSMAUG00000008059	Ddx39b	57	100.000	Mesocricetus_auratus
ENSCGRG00000012479	-	76	99.184	ENSMICG00000017349	DDX39B	57	99.184	Microcebus_murinus
ENSCGRG00000012479	-	76	100.000	ENSMOCG00000011169	Ddx39b	57	100.000	Microtus_ochrogaster
ENSCGRG00000012479	-	76	99.184	ENSMODG00000015791	DDX39B	58	99.184	Monodelphis_domestica
ENSCGRG00000012479	-	56	97.765	MGP_CAROLIEiJ_G0021519	-	97	97.765	Mus_caroli
ENSCGRG00000012479	-	76	99.184	ENSMUSG00000019432	Ddx39b	100	99.324	Mus_musculus
ENSCGRG00000012479	-	76	99.184	MGP_PahariEiJ_G0020513	Ddx39b	100	99.324	Mus_pahari
ENSCGRG00000012479	-	100	96.296	MGP_SPRETEiJ_G0022424	Ddx39b	100	96.296	Mus_spretus
ENSCGRG00000012479	-	76	98.776	ENSMPUG00000011407	DDX39B	57	98.776	Mustela_putorius_furo
ENSCGRG00000012479	-	76	99.184	ENSNGAG00000022948	Ddx39b	57	99.184	Nannospalax_galili
ENSCGRG00000012479	-	76	98.776	ENSOPRG00000011923	DDX39B	57	98.776	Ochotona_princeps
ENSCGRG00000012479	-	76	98.367	ENSODEG00000018083	DDX39B	57	98.367	Octodon_degus
ENSCGRG00000012479	-	76	89.960	ENSONIG00000004740	ddx39b	58	89.960	Oreochromis_niloticus
ENSCGRG00000012479	-	74	98.312	ENSOANG00000008361	DDX39B	95	98.312	Ornithorhynchus_anatinus
ENSCGRG00000012479	-	76	92.692	ENSOCUG00000024126	DDX39B	59	92.692	Oryctolagus_cuniculus
ENSCGRG00000012479	-	76	97.561	ENSOGAG00000028850	-	57	97.561	Otolemur_garnettii
ENSCGRG00000012479	-	76	98.776	ENSOARG00000008787	DDX39B	56	98.776	Ovis_aries
ENSCGRG00000012479	-	76	99.184	ENSPPAG00000043072	DDX39B	57	99.184	Pan_paniscus
ENSCGRG00000012479	-	76	98.776	ENSPPRG00000001913	DDX39B	57	98.776	Panthera_pardus
ENSCGRG00000012479	-	76	97.143	ENSPTIG00000017669	DDX39B	57	97.143	Panthera_tigris_altaica
ENSCGRG00000012479	-	76	99.184	ENSPTRG00000032509	DDX39B	57	99.184	Pan_troglodytes
ENSCGRG00000012479	-	100	91.589	ENSPANG00000018609	DDX39B	97	91.277	Papio_anubis
ENSCGRG00000012479	-	76	85.827	ENSPKIG00000011324	ddx39b	58	87.008	Paramormyrops_kingsleyae
ENSCGRG00000012479	-	76	99.592	ENSPEMG00000016905	Ddx39b	57	99.592	Peromyscus_maniculatus_bairdii
ENSCGRG00000012479	-	76	99.184	ENSPCIG00000017572	DDX39B	57	99.184	Phascolarctos_cinereus
ENSCGRG00000012479	-	76	99.184	ENSPPYG00000016433	DDX39B	57	99.184	Pongo_abelii
ENSCGRG00000012479	-	76	99.184	ENSPCOG00000018656	DDX39B	60	99.184	Propithecus_coquereli
ENSCGRG00000012479	-	76	99.184	ENSPVAG00000004653	DDX39B	57	99.184	Pteropus_vampyrus
ENSCGRG00000012479	-	76	74.297	ENSPNYG00000010382	ddx39b	55	74.297	Pundamilia_nyererei
ENSCGRG00000012479	-	76	88.142	ENSPNAG00000026926	ddx39b	58	88.142	Pygocentrus_nattereri
ENSCGRG00000012479	-	76	99.184	ENSRNOG00000000841	Ddx39b	61	99.184	Rattus_norvegicus
ENSCGRG00000012479	-	100	91.589	ENSRBIG00000031309	DDX39B	97	91.277	Rhinopithecus_bieti
ENSCGRG00000012479	-	100	91.589	ENSRROG00000039517	DDX39B	97	91.277	Rhinopithecus_roxellana
ENSCGRG00000012479	-	95	95.752	ENSSBOG00000035513	-	96	95.752	Saimiri_boliviensis_boliviensis
ENSCGRG00000012479	-	76	99.184	ENSSHAG00000003209	DDX39B	57	99.184	Sarcophilus_harrisii
ENSCGRG00000012479	-	76	86.614	ENSSFOG00015016107	ddx39b	58	87.795	Scleropages_formosus
ENSCGRG00000012479	-	76	90.763	ENSSDUG00000011557	ddx39b	58	91.165	Seriola_dumerili
ENSCGRG00000012479	-	76	90.361	ENSSLDG00000015763	ddx39b	58	90.763	Seriola_lalandi_dorsalis
ENSCGRG00000012479	-	76	99.184	ENSSARG00000005245	DDX39B	66	99.184	Sorex_araneus
ENSCGRG00000012479	-	76	96.327	ENSSPUG00000012805	DDX39B	57	96.327	Sphenodon_punctatus
ENSCGRG00000012479	-	76	99.184	ENSSSCG00000001400	DDX39B	52	99.184	Sus_scrofa
ENSCGRG00000012479	-	76	84.400	ENSTTRG00000014074	DDX39B	58	84.400	Tursiops_truncatus
ENSCGRG00000012479	-	100	83.591	ENSUAMG00000027335	DDX39B	79	83.591	Ursus_americanus
ENSCGRG00000012479	-	100	85.358	ENSUMAG00000015124	DDX39B	96	85.358	Ursus_maritimus
ENSCGRG00000012479	-	100	92.212	ENSVVUG00000019518	DDX39B	72	92.212	Vulpes_vulpes
ENSCGRG00000012479	-	76	73.279	ENSXETG00000002498	ddx39b	57	73.279	Xenopus_tropicalis