EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000012850 (Gene tree)
Gene ID: -
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 233749 bases
Position: chrJH000097.1:690658-924406
Accession: 100769940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000017667	ResIII	PF04851.15	1.7e-07	1	1
ENSCGRP00000017665	ResIII	PF04851.15	1.6e-06	1	1
ENSCGRP00000017666	ResIII	PF04851.15	1.6e-06	1	1
ENSCGRP00000017665	BRK	PF07533.16	1.7e-30	1	2
ENSCGRP00000017665	BRK	PF07533.16	1.7e-30	2	2
ENSCGRP00000017666	BRK	PF07533.16	1.7e-30	1	2
ENSCGRP00000017666	BRK	PF07533.16	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000017925	-	14110	XM_007621005	ENSCGRP00000017665	2880 (aa)	XP_007619195	UPI000454402F
ENSCGRT00000017927	-	2953	-	ENSCGRP00000017667	874 (aa)	-	-
ENSCGRT00000017926	-	14419	XM_007620997	ENSCGRP00000017666	2880 (aa)	XP_007619187	UPI000454402F

Gene Model

Click here to download ENSCGRG00000012850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000012850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000012850	Chd9	95	73.068	ENSCGRG00000009710	Chd8	76	68.333
ENSCGRG00000012850	Chd9	57	30.370	ENSCGRG00000016752	Rad54b	59	30.370
ENSCGRG00000012850	Chd9	56	43.838	ENSCGRG00000001417	Smarca5	60	39.432
ENSCGRG00000012850	Chd9	89	70.897	ENSCGRG00000000481	Chd7	94	52.780
ENSCGRG00000012850	Chd9	54	31.213	ENSCGRG00000016038	Rad54l	66	31.412
ENSCGRG00000012850	Chd9	57	43.086	ENSCGRG00000015301	Smarca1	61	38.249
ENSCGRG00000012850	Chd9	54	42.767	ENSCGRG00000007554	Chd1l	53	42.767
ENSCGRG00000012850	Chd9	55	35.019	ENSCGRG00000014087	Smarcad1	50	34.888
ENSCGRG00000012850	Chd9	89	64.743	ENSCGRG00000006749	-	99	71.376

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000012850	Chd9	100	96.339	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSCGRG00000012850	Chd9	99	77.741	ENSAPOG00000023034	chd9	98	68.508	Acanthochromis_polyacanthus
ENSCGRG00000012850	Chd9	99	95.838	ENSAMEG00000016232	CHD9	99	92.294	Ailuropoda_melanoleuca
ENSCGRG00000012850	Chd9	94	75.362	ENSACIG00000004097	chd9	73	61.549	Amphilophus_citrinellus
ENSCGRG00000012850	Chd9	99	77.741	ENSAOCG00000005487	chd9	99	68.427	Amphiprion_ocellaris
ENSCGRG00000012850	Chd9	99	77.741	ENSAPEG00000009859	chd9	98	68.345	Amphiprion_percula
ENSCGRG00000012850	Chd9	95	81.971	ENSATEG00000002748	chd9	99	62.079	Anabas_testudineus
ENSCGRG00000012850	Chd9	99	90.679	ENSAPLG00000002826	CHD9	74	83.904	Anas_platyrhynchos
ENSCGRG00000012850	Chd9	99	89.643	ENSACAG00000016150	CHD9	98	79.494	Anolis_carolinensis
ENSCGRG00000012850	Chd9	99	96.647	ENSANAG00000015630	CHD9	98	95.971	Aotus_nancymaae
ENSCGRG00000012850	Chd9	94	80.024	ENSACLG00000016899	chd9	99	61.263	Astatotilapia_calliptera
ENSCGRG00000012850	Chd9	99	77.027	ENSAMXG00000005652	chd9	99	68.265	Astyanax_mexicanus
ENSCGRG00000012850	Chd9	99	95.838	ENSBTAG00000002287	CHD9	99	91.528	Bos_taurus
ENSCGRG00000012850	Chd9	99	96.416	ENSCJAG00000001573	CHD9	98	96.337	Callithrix_jacchus
ENSCGRG00000012850	Chd9	99	95.838	ENSCAFG00000009699	CHD9	99	92.465	Canis_familiaris
ENSCGRG00000012850	Chd9	99	95.838	ENSCAFG00020002879	CHD9	98	96.337	Canis_lupus_dingo
ENSCGRG00000012850	Chd9	99	95.954	ENSTSYG00000007693	CHD9	98	95.971	Carlito_syrichta
ENSCGRG00000012850	Chd9	91	94.545	ENSCAPG00000011604	CHD9	81	77.265	Cavia_aperea
ENSCGRG00000012850	Chd9	99	88.498	ENSCPOG00000036544	CHD9	99	89.055	Cavia_porcellus
ENSCGRG00000012850	Chd9	99	96.416	ENSCCAG00000036178	CHD9	98	95.604	Cebus_capucinus
ENSCGRG00000012850	Chd9	99	96.301	ENSCATG00000036753	CHD9	98	96.337	Cercocebus_atys
ENSCGRG00000012850	Chd9	100	96.110	ENSCLAG00000007137	CHD9	100	96.110	Chinchilla_lanigera
ENSCGRG00000012850	Chd9	99	96.301	ENSCSAG00000005311	CHD9	99	92.158	Chlorocebus_sabaeus
ENSCGRG00000012850	Chd9	76	96.615	ENSCHOG00000003935	CHD9	76	96.154	Choloepus_hoffmanni
ENSCGRG00000012850	Chd9	99	91.484	ENSCPBG00000012459	CHD9	99	90.968	Chrysemys_picta_bellii
ENSCGRG00000012850	Chd9	99	96.185	ENSCANG00000030349	CHD9	98	96.337	Colobus_angolensis_palliatus
ENSCGRG00000012850	Chd9	100	100.000	ENSCGRG00001016150	Chd9	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000012850	Chd9	94	79.373	ENSCSEG00000009209	chd9	96	67.131	Cynoglossus_semilaevis
ENSCGRG00000012850	Chd9	95	80.572	ENSCVAG00000016195	chd9	99	60.570	Cyprinodon_variegatus
ENSCGRG00000012850	Chd9	99	74.889	ENSDARG00000074498	chd9	66	74.923	Danio_rerio
ENSCGRG00000012850	Chd9	92	95.500	ENSDNOG00000006045	CHD9	99	92.232	Dasypus_novemcinctus
ENSCGRG00000012850	Chd9	69	90.421	ENSDORG00000008523	-	99	91.274	Dipodomys_ordii
ENSCGRG00000012850	Chd9	93	96.842	ENSETEG00000009565	CHD9	93	96.842	Echinops_telfairi
ENSCGRG00000012850	Chd9	99	95.954	ENSEASG00005014832	CHD9	99	94.319	Equus_asinus_asinus
ENSCGRG00000012850	Chd9	99	96.069	ENSECAG00000011505	CHD9	99	91.947	Equus_caballus
ENSCGRG00000012850	Chd9	83	97.238	ENSEEUG00000014515	CHD9	87	97.238	Erinaceus_europaeus
ENSCGRG00000012850	Chd9	97	79.511	ENSELUG00000006031	chd9	91	74.293	Esox_lucius
ENSCGRG00000012850	Chd9	99	95.607	ENSFCAG00000022534	CHD9	98	95.971	Felis_catus
ENSCGRG00000012850	Chd9	100	90.650	ENSFALG00000013276	CHD9	99	85.994	Ficedula_albicollis
ENSCGRG00000012850	Chd9	99	95.723	ENSFDAG00000021037	CHD9	99	92.110	Fukomys_damarensis
ENSCGRG00000012850	Chd9	99	77.567	ENSFHEG00000006068	chd9	94	70.885	Fundulus_heteroclitus
ENSCGRG00000012850	Chd9	95	76.128	ENSGMOG00000006040	chd9	83	76.323	Gadus_morhua
ENSCGRG00000012850	Chd9	99	90.449	ENSGALG00000039178	CHD9	99	83.138	Gallus_gallus
ENSCGRG00000012850	Chd9	99	76.966	ENSGAFG00000010014	chd9	98	67.765	Gambusia_affinis
ENSCGRG00000012850	Chd9	94	80.217	ENSGACG00000016694	chd9	68	74.480	Gasterosteus_aculeatus
ENSCGRG00000012850	Chd9	99	96.301	ENSGGOG00000014816	CHD9	98	96.703	Gorilla_gorilla
ENSCGRG00000012850	Chd9	99	75.885	ENSHBUG00000023322	chd9	96	69.580	Haplochromis_burtoni
ENSCGRG00000012850	Chd9	100	96.224	ENSHGLG00000014938	CHD9	100	96.224	Heterocephalus_glaber_female
ENSCGRG00000012850	Chd9	100	96.224	ENSHGLG00100001011	-	100	96.224	Heterocephalus_glaber_male
ENSCGRG00000012850	Chd9	94	80.802	ENSHCOG00000000937	chd9	95	69.015	Hippocampus_comes
ENSCGRG00000012850	Chd9	95	81.513	ENSIPUG00000016448	chd9	97	72.628	Ictalurus_punctatus
ENSCGRG00000012850	Chd9	100	96.453	ENSSTOG00000022273	CHD9	100	96.453	Ictidomys_tridecemlineatus
ENSCGRG00000012850	Chd9	69	91.307	ENSJJAG00000015741	-	99	92.161	Jaculus_jaculus
ENSCGRG00000012850	Chd9	99	77.802	ENSKMAG00000016784	chd9	95	69.558	Kryptolebias_marmoratus
ENSCGRG00000012850	Chd9	99	76.269	ENSLBEG00000012077	chd9	95	68.778	Labrus_bergylta
ENSCGRG00000012850	Chd9	99	76.755	ENSLACG00000005557	CHD9	73	71.442	Latimeria_chalumnae
ENSCGRG00000012850	Chd9	100	80.808	ENSLOCG00000007225	chd9	68	78.969	Lepisosteus_oculatus
ENSCGRG00000012850	Chd9	99	94.913	ENSLAFG00000015374	CHD9	99	91.253	Loxodonta_africana
ENSCGRG00000012850	Chd9	99	96.301	ENSMFAG00000041354	CHD9	98	96.337	Macaca_fascicularis
ENSCGRG00000012850	Chd9	99	96.301	ENSMMUG00000016310	CHD9	98	96.337	Macaca_mulatta
ENSCGRG00000012850	Chd9	99	96.301	ENSMNEG00000031494	CHD9	100	92.772	Macaca_nemestrina
ENSCGRG00000012850	Chd9	99	96.301	ENSMLEG00000043219	CHD9	98	96.337	Mandrillus_leucophaeus
ENSCGRG00000012850	Chd9	94	82.126	ENSMAMG00000003909	chd9	99	60.575	Mastacembelus_armatus
ENSCGRG00000012850	Chd9	99	77.544	ENSMZEG00005006581	chd9	97	68.536	Maylandia_zebra
ENSCGRG00000012850	Chd9	99	79.818	ENSMGAG00000004642	CHD9	72	79.167	Meleagris_gallopavo
ENSCGRG00000012850	Chd9	100	98.856	ENSMAUG00000011087	-	100	98.856	Mesocricetus_auratus
ENSCGRG00000012850	Chd9	99	96.763	ENSMICG00000016679	CHD9	98	95.238	Microcebus_murinus
ENSCGRG00000012850	Chd9	100	98.284	ENSMOCG00000018583	-	100	98.284	Microtus_ochrogaster
ENSCGRG00000012850	Chd9	95	80.499	ENSMMOG00000016406	chd9	74	63.012	Mola_mola
ENSCGRG00000012850	Chd9	67	95.734	ENSMODG00000013142	-	99	91.147	Monodelphis_domestica
ENSCGRG00000012850	Chd9	95	82.134	ENSMALG00000013306	chd9	97	61.409	Monopterus_albus
ENSCGRG00000012850	Chd9	99	97.110	MGP_CAROLIEiJ_G0031364	Chd9	99	93.693	Mus_caroli
ENSCGRG00000012850	Chd9	100	97.140	ENSMUSG00000056608	Chd9	100	97.140	Mus_musculus
ENSCGRG00000012850	Chd9	99	96.763	MGP_PahariEiJ_G0022964	Chd9	100	91.877	Mus_pahari
ENSCGRG00000012850	Chd9	99	96.994	MGP_SPRETEiJ_G0032483	Chd9	99	93.547	Mus_spretus
ENSCGRG00000012850	Chd9	99	96.069	ENSMPUG00000003285	CHD9	99	92.185	Mustela_putorius_furo
ENSCGRG00000012850	Chd9	99	95.029	ENSMLUG00000004456	CHD9	99	90.757	Myotis_lucifugus
ENSCGRG00000012850	Chd9	100	96.796	ENSNGAG00000019957	-	100	96.796	Nannospalax_galili
ENSCGRG00000012850	Chd9	99	77.544	ENSNBRG00000009423	chd9	97	68.200	Neolamprologus_brichardi
ENSCGRG00000012850	Chd9	99	96.301	ENSNLEG00000001026	CHD9	100	92.986	Nomascus_leucogenys
ENSCGRG00000012850	Chd9	83	91.803	ENSMEUG00000008222	-	84	95.425	Notamacropus_eugenii
ENSCGRG00000012850	Chd9	85	96.286	ENSOPRG00000011168	CHD9	85	96.286	Ochotona_princeps
ENSCGRG00000012850	Chd9	99	95.607	ENSODEG00000004466	CHD9	99	91.768	Octodon_degus
ENSCGRG00000012850	Chd9	94	82.126	ENSONIG00000002816	chd9	99	69.668	Oreochromis_niloticus
ENSCGRG00000012850	Chd9	99	92.042	ENSOANG00000013401	CHD9	99	84.535	Ornithorhynchus_anatinus
ENSCGRG00000012850	Chd9	100	96.682	ENSOCUG00000001016	CHD9	98	93.860	Oryctolagus_cuniculus
ENSCGRG00000012850	Chd9	99	77.989	ENSORLG00000013810	chd9	97	61.066	Oryzias_latipes
ENSCGRG00000012850	Chd9	93	80.755	ENSORLG00020020665	chd9	96	61.898	Oryzias_latipes_hni
ENSCGRG00000012850	Chd9	99	77.642	ENSORLG00015019126	chd9	94	69.043	Oryzias_latipes_hsok
ENSCGRG00000012850	Chd9	95	79.376	ENSOMEG00000015978	chd9	99	62.187	Oryzias_melastigma
ENSCGRG00000012850	Chd9	99	96.301	ENSOGAG00000002110	CHD9	99	92.358	Otolemur_garnettii
ENSCGRG00000012850	Chd9	99	95.838	ENSOARG00000017664	CHD9	99	91.294	Ovis_aries
ENSCGRG00000012850	Chd9	98	93.714	ENSPPAG00000039388	-	99	92.462	Pan_paniscus
ENSCGRG00000012850	Chd9	99	95.607	ENSPPRG00000004801	CHD9	98	95.604	Panthera_pardus
ENSCGRG00000012850	Chd9	99	95.491	ENSPTIG00000021854	CHD9	99	91.108	Panthera_tigris_altaica
ENSCGRG00000012850	Chd9	99	96.185	ENSPTRG00000008113	CHD9	98	96.703	Pan_troglodytes
ENSCGRG00000012850	Chd9	100	96.453	ENSPANG00000019307	CHD9	98	96.337	Papio_anubis
ENSCGRG00000012850	Chd9	95	76.960	ENSPKIG00000025401	-	71	62.318	Paramormyrops_kingsleyae
ENSCGRG00000012850	Chd9	99	80.694	ENSPKIG00000021876	chd9	98	69.935	Paramormyrops_kingsleyae
ENSCGRG00000012850	Chd9	99	87.788	ENSPSIG00000008099	CHD9	99	82.541	Pelodiscus_sinensis
ENSCGRG00000012850	Chd9	53	76.824	ENSPMAG00000006035	-	72	67.742	Petromyzon_marinus
ENSCGRG00000012850	Chd9	100	92.694	ENSPCIG00000017215	CHD9	99	88.343	Phascolarctos_cinereus
ENSCGRG00000012850	Chd9	94	81.697	ENSPFOG00000015839	chd9	99	59.620	Poecilia_formosa
ENSCGRG00000012850	Chd9	100	77.158	ENSPLAG00000011118	chd9	98	68.616	Poecilia_latipinna
ENSCGRG00000012850	Chd9	94	80.024	ENSPMEG00000015106	chd9	99	60.366	Poecilia_mexicana
ENSCGRG00000012850	Chd9	99	77.434	ENSPREG00000006473	chd9	98	67.900	Poecilia_reticulata
ENSCGRG00000012850	Chd9	99	96.301	ENSPPYG00000007348	CHD9	99	92.463	Pongo_abelii
ENSCGRG00000012850	Chd9	99	93.519	ENSPCAG00000007564	CHD9	86	94.485	Procavia_capensis
ENSCGRG00000012850	Chd9	99	96.763	ENSPCOG00000028433	CHD9	98	96.337	Propithecus_coquereli
ENSCGRG00000012850	Chd9	99	86.705	ENSPVAG00000015617	CHD9	97	88.739	Pteropus_vampyrus
ENSCGRG00000012850	Chd9	99	77.544	ENSPNYG00000010947	chd9	97	68.483	Pundamilia_nyererei
ENSCGRG00000012850	Chd9	99	78.041	ENSPNAG00000024141	chd9	99	68.913	Pygocentrus_nattereri
ENSCGRG00000012850	Chd9	99	94.913	ENSRNOG00000049302	Chd9	100	92.821	Rattus_norvegicus
ENSCGRG00000012850	Chd9	99	96.296	ENSRBIG00000035553	CHD9	98	96.337	Rhinopithecus_bieti
ENSCGRG00000012850	Chd9	96	96.314	ENSRROG00000033278	CHD9	98	96.337	Rhinopithecus_roxellana
ENSCGRG00000012850	Chd9	99	96.416	ENSSBOG00000030240	CHD9	98	95.971	Saimiri_boliviensis_boliviensis
ENSCGRG00000012850	Chd9	99	92.272	ENSSHAG00000002719	CHD9	99	85.546	Sarcophilus_harrisii
ENSCGRG00000012850	Chd9	99	77.815	ENSSFOG00015001327	chd9	67	76.044	Scleropages_formosus
ENSCGRG00000012850	Chd9	99	80.231	ENSSFOG00015020209	chd9	99	69.803	Scleropages_formosus
ENSCGRG00000012850	Chd9	99	77.009	ENSSMAG00000008953	chd9	98	67.324	Scophthalmus_maximus
ENSCGRG00000012850	Chd9	99	77.679	ENSSDUG00000006139	chd9	98	67.646	Seriola_dumerili
ENSCGRG00000012850	Chd9	99	77.679	ENSSLDG00000017818	chd9	98	68.074	Seriola_lalandi_dorsalis
ENSCGRG00000012850	Chd9	90	98.715	ENSSARG00000010632	CHD9	71	96.062	Sorex_araneus
ENSCGRG00000012850	Chd9	99	77.962	ENSSPAG00000021649	chd9	98	68.237	Stegastes_partitus
ENSCGRG00000012850	Chd9	99	95.607	ENSSSCG00000033591	CHD9	75	92.743	Sus_scrofa
ENSCGRG00000012850	Chd9	99	90.471	ENSTGUG00000007476	CHD9	100	83.136	Taeniopygia_guttata
ENSCGRG00000012850	Chd9	95	80.958	ENSTRUG00000009125	chd9	99	60.694	Takifugu_rubripes
ENSCGRG00000012850	Chd9	68	94.737	ENSTNIG00000003825	chd9	97	62.850	Tetraodon_nigroviridis
ENSCGRG00000012850	Chd9	92	82.814	ENSTBEG00000016052	-	81	90.991	Tupaia_belangeri
ENSCGRG00000012850	Chd9	99	96.069	ENSTTRG00000012674	CHD9	90	91.529	Tursiops_truncatus
ENSCGRG00000012850	Chd9	63	89.919	ENSUAMG00000022706	CHD9	98	96.337	Ursus_americanus
ENSCGRG00000012850	Chd9	99	95.838	ENSUMAG00000004043	CHD9	98	97.228	Ursus_maritimus
ENSCGRG00000012850	Chd9	90	98.826	ENSVPAG00000001374	CHD9	97	91.078	Vicugna_pacos
ENSCGRG00000012850	Chd9	99	95.838	ENSVVUG00000019435	CHD9	99	92.465	Vulpes_vulpes
ENSCGRG00000012850	Chd9	99	85.731	ENSXETG00000000349	chd9	96	75.520	Xenopus_tropicalis
ENSCGRG00000012850	Chd9	95	80.981	ENSXCOG00000012997	chd9	98	68.643	Xiphophorus_couchianus
ENSCGRG00000012850	Chd9	99	77.323	ENSXMAG00000016192	chd9	99	68.942	Xiphophorus_maculatus