EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000013225 (Gene tree)
Gene ID: -
Gene Symbol: Polr1c
Alias: 40kDa|RPA40|Rpo1-1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 2286 bases
Position: chrJH000944.1:618342-620627
Accession: 100758205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000018177	RNA_pol_A_bac	PF01000.26	1.6e-30	1	1
ENSCGRP00000018177	RNA_pol_L	PF01193.24	5.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000018443	-	1280	XM_007648970	ENSCGRP00000018177	299 (aa)	XP_007647160	-

Gene Model

Click here to download ENSCGRG00000013225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000013225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000013225	Polr1c	100	95.318	ENSG00000171453	POLR1C	100	95.189	Homo_sapiens
ENSCGRG00000013225	Polr1c	99	72.517	ENSAPOG00000024356	polr1c	86	73.179	Acanthochromis_polyacanthus
ENSCGRG00000013225	Polr1c	100	94.314	ENSAMEG00000012205	POLR1C	86	94.314	Ailuropoda_melanoleuca
ENSCGRG00000013225	Polr1c	99	66.890	ENSACIG00000016268	polr1c	85	67.333	Amphilophus_citrinellus
ENSCGRG00000013225	Polr1c	99	70.530	ENSAOCG00000011687	polr1c	83	71.192	Amphiprion_ocellaris
ENSCGRG00000013225	Polr1c	99	70.530	ENSAPEG00000002433	polr1c	86	71.192	Amphiprion_percula
ENSCGRG00000013225	Polr1c	99	74.086	ENSATEG00000005985	polr1c	86	74.086	Anabas_testudineus
ENSCGRG00000013225	Polr1c	99	81.544	ENSAPLG00000002908	POLR1C	99	81.544	Anas_platyrhynchos
ENSCGRG00000013225	Polr1c	87	80.385	ENSACAG00000009764	POLR1C	74	80.385	Anolis_carolinensis
ENSCGRG00000013225	Polr1c	100	94.983	ENSANAG00000025805	POLR1C	85	94.983	Aotus_nancymaae
ENSCGRG00000013225	Polr1c	69	30.516	ENSACLG00000004854	polr2c	86	30.516	Astatotilapia_calliptera
ENSCGRG00000013225	Polr1c	100	71.947	ENSACLG00000006573	polr1c	86	72.607	Astatotilapia_calliptera
ENSCGRG00000013225	Polr1c	100	73.244	ENSAMXG00000012062	polr1c	86	73.244	Astyanax_mexicanus
ENSCGRG00000013225	Polr1c	100	93.311	ENSBTAG00000018969	POLR1C	86	93.311	Bos_taurus
ENSCGRG00000013225	Polr1c	96	50.825	WBGene00019275	rpac-40	82	50.825	Caenorhabditis_elegans
ENSCGRG00000013225	Polr1c	100	94.649	ENSCJAG00000005594	POLR1C	86	94.649	Callithrix_jacchus
ENSCGRG00000013225	Polr1c	100	93.980	ENSCAFG00000001872	POLR1C	86	93.980	Canis_familiaris
ENSCGRG00000013225	Polr1c	64	32.821	ENSCAFG00020007660	POLR2C	55	32.821	Canis_lupus_dingo
ENSCGRG00000013225	Polr1c	100	93.980	ENSCAFG00020012018	POLR1C	86	93.980	Canis_lupus_dingo
ENSCGRG00000013225	Polr1c	100	93.667	ENSCHIG00000004352	POLR1C	86	93.667	Capra_hircus
ENSCGRG00000013225	Polr1c	100	94.983	ENSTSYG00000011921	POLR1C	86	94.983	Carlito_syrichta
ENSCGRG00000013225	Polr1c	100	94.314	ENSCAPG00000015364	POLR1C	88	94.314	Cavia_aperea
ENSCGRG00000013225	Polr1c	100	94.649	ENSCPOG00000038098	POLR1C	86	94.649	Cavia_porcellus
ENSCGRG00000013225	Polr1c	100	95.652	ENSCCAG00000020169	POLR1C	86	95.652	Cebus_capucinus
ENSCGRG00000013225	Polr1c	100	94.649	ENSCATG00000044045	POLR1C	86	94.649	Cercocebus_atys
ENSCGRG00000013225	Polr1c	100	95.318	ENSCLAG00000009266	POLR1C	86	95.318	Chinchilla_lanigera
ENSCGRG00000013225	Polr1c	100	93.645	ENSCSAG00000011913	POLR1C	86	93.645	Chlorocebus_sabaeus
ENSCGRG00000013225	Polr1c	71	92.453	ENSCHOG00000006601	POLR1C	100	92.453	Choloepus_hoffmanni
ENSCGRG00000013225	Polr1c	100	84.281	ENSCPBG00000025203	POLR1C	86	84.281	Chrysemys_picta_bellii
ENSCGRG00000013225	Polr1c	100	56.333	ENSCING00000003563	-	86	56.333	Ciona_intestinalis
ENSCGRG00000013225	Polr1c	64	30.653	ENSCSAVG00000002167	-	66	30.653	Ciona_savignyi
ENSCGRG00000013225	Polr1c	100	94.314	ENSCANG00000043167	POLR1C	86	94.314	Colobus_angolensis_palliatus
ENSCGRG00000013225	Polr1c	100	100.000	ENSCGRG00001017533	Polr1c	86	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000013225	Polr1c	100	73.913	ENSCSEG00000018097	polr1c	86	73.913	Cynoglossus_semilaevis
ENSCGRG00000013225	Polr1c	71	69.340	ENSCVAG00000005684	polr1c	88	68.950	Cyprinodon_variegatus
ENSCGRG00000013225	Polr1c	65	31.658	ENSCVAG00000017931	polr2c	76	31.658	Cyprinodon_variegatus
ENSCGRG00000013225	Polr1c	100	71.906	ENSDARG00000039400	polr1c	83	71.906	Danio_rerio
ENSCGRG00000013225	Polr1c	100	93.311	ENSDNOG00000042693	POLR1C	86	93.311	Dasypus_novemcinctus
ENSCGRG00000013225	Polr1c	100	94.649	ENSDORG00000000429	Polr1c	86	94.649	Dipodomys_ordii
ENSCGRG00000013225	Polr1c	98	56.314	FBgn0031657	CG3756	87	56.314	Drosophila_melanogaster
ENSCGRG00000013225	Polr1c	100	88.629	ENSETEG00000010807	POLR1C	86	88.629	Echinops_telfairi
ENSCGRG00000013225	Polr1c	99	73.559	ENSEBUG00000013725	polr1c	91	73.559	Eptatretus_burgeri
ENSCGRG00000013225	Polr1c	100	93.645	ENSEASG00005003338	POLR1C	86	93.645	Equus_asinus_asinus
ENSCGRG00000013225	Polr1c	100	93.311	ENSECAG00000023516	POLR1C	85	93.311	Equus_caballus
ENSCGRG00000013225	Polr1c	100	94.649	ENSEEUG00000005471	POLR1C	86	94.649	Erinaceus_europaeus
ENSCGRG00000013225	Polr1c	100	73.244	ENSELUG00000013027	polr1c	86	73.244	Esox_lucius
ENSCGRG00000013225	Polr1c	100	93.645	ENSFCAG00000009735	POLR1C	86	93.645	Felis_catus
ENSCGRG00000013225	Polr1c	64	31.795	ENSFALG00000006931	POLR2C	67	31.795	Ficedula_albicollis
ENSCGRG00000013225	Polr1c	99	81.208	ENSFALG00000012111	POLR1C	92	81.208	Ficedula_albicollis
ENSCGRG00000013225	Polr1c	100	93.980	ENSFDAG00000008428	POLR1C	86	93.980	Fukomys_damarensis
ENSCGRG00000013225	Polr1c	100	59.532	ENSFHEG00000000262	polr1c	84	59.532	Fundulus_heteroclitus
ENSCGRG00000013225	Polr1c	100	72.000	ENSGMOG00000013878	polr1c	93	72.000	Gadus_morhua
ENSCGRG00000013225	Polr1c	99	81.879	ENSGALG00000010349	POLR1C	86	81.879	Gallus_gallus
ENSCGRG00000013225	Polr1c	100	71.617	ENSGAFG00000010153	polr1c	86	71.947	Gambusia_affinis
ENSCGRG00000013225	Polr1c	100	71.947	ENSGACG00000002453	polr1c	86	72.937	Gasterosteus_aculeatus
ENSCGRG00000013225	Polr1c	100	83.946	ENSGAGG00000010640	POLR1C	93	83.946	Gopherus_agassizii
ENSCGRG00000013225	Polr1c	100	95.318	ENSGGOG00000010903	POLR1C	86	95.318	Gorilla_gorilla
ENSCGRG00000013225	Polr1c	69	30.516	ENSHBUG00000023040	polr2c	86	30.516	Haplochromis_burtoni
ENSCGRG00000013225	Polr1c	88	71.103	ENSHBUG00000017816	polr1c	80	71.103	Haplochromis_burtoni
ENSCGRG00000013225	Polr1c	100	93.645	ENSHGLG00000019441	POLR1C	100	93.077	Heterocephalus_glaber_female
ENSCGRG00000013225	Polr1c	100	93.311	ENSHGLG00100005970	POLR1C	100	92.692	Heterocephalus_glaber_male
ENSCGRG00000013225	Polr1c	99	69.900	ENSHCOG00000002179	polr1c	85	69.900	Hippocampus_comes
ENSCGRG00000013225	Polr1c	99	74.411	ENSIPUG00000024464	polr1c	85	74.411	Ictalurus_punctatus
ENSCGRG00000013225	Polr1c	100	95.987	ENSSTOG00000010631	POLR1C	86	95.987	Ictidomys_tridecemlineatus
ENSCGRG00000013225	Polr1c	100	93.980	ENSJJAG00000023110	Polr1c	86	93.980	Jaculus_jaculus
ENSCGRG00000013225	Polr1c	100	70.957	ENSKMAG00000014305	polr1c	84	71.617	Kryptolebias_marmoratus
ENSCGRG00000013225	Polr1c	100	70.957	ENSLBEG00000014925	polr1c	86	71.617	Labrus_bergylta
ENSCGRG00000013225	Polr1c	96	62.887	ENSLACG00000012567	POLR1C	86	62.887	Latimeria_chalumnae
ENSCGRG00000013225	Polr1c	99	75.168	ENSLOCG00000016710	polr1c	82	75.168	Lepisosteus_oculatus
ENSCGRG00000013225	Polr1c	100	93.667	ENSLAFG00000026248	POLR1C	99	93.667	Loxodonta_africana
ENSCGRG00000013225	Polr1c	64	32.821	ENSLAFG00000027230	POLR2C	68	32.821	Loxodonta_africana
ENSCGRG00000013225	Polr1c	100	94.314	ENSMFAG00000046295	POLR1C	86	94.314	Macaca_fascicularis
ENSCGRG00000013225	Polr1c	100	94.314	ENSMMUG00000015192	POLR1C	86	94.314	Macaca_mulatta
ENSCGRG00000013225	Polr1c	100	94.314	ENSMNEG00000028073	POLR1C	86	94.314	Macaca_nemestrina
ENSCGRG00000013225	Polr1c	100	94.649	ENSMLEG00000034818	POLR1C	86	94.649	Mandrillus_leucophaeus
ENSCGRG00000013225	Polr1c	100	72.937	ENSMAMG00000008700	polr1c	86	72.937	Mastacembelus_armatus
ENSCGRG00000013225	Polr1c	100	71.617	ENSMZEG00005018545	polr1c	86	72.277	Maylandia_zebra
ENSCGRG00000013225	Polr1c	97	76.976	ENSMGAG00000011020	POLR1C	100	76.976	Meleagris_gallopavo
ENSCGRG00000013225	Polr1c	64	31.633	ENSMAUG00000019031	-	72	31.633	Mesocricetus_auratus
ENSCGRG00000013225	Polr1c	100	98.662	ENSMAUG00000014329	Polr1c	86	98.662	Mesocricetus_auratus
ENSCGRG00000013225	Polr1c	100	93.645	ENSMICG00000005027	POLR1C	86	93.645	Microcebus_murinus
ENSCGRG00000013225	Polr1c	63	32.836	ENSMOCG00000013652	Polr2c	66	32.836	Microtus_ochrogaster
ENSCGRG00000013225	Polr1c	100	98.328	ENSMOCG00000017549	Polr1c	86	98.328	Microtus_ochrogaster
ENSCGRG00000013225	Polr1c	99	57.047	ENSMMOG00000005380	polr1c	83	57.047	Mola_mola
ENSCGRG00000013225	Polr1c	97	88.316	ENSMODG00000018964	POLR1C	100	88.316	Monodelphis_domestica
ENSCGRG00000013225	Polr1c	100	60.870	ENSMALG00000011711	polr1c	84	60.870	Monopterus_albus
ENSCGRG00000013225	Polr1c	96	90.278	MGP_CAROLIEiJ_G0021662	Polr1c	100	96.923	Mus_caroli
ENSCGRG00000013225	Polr1c	100	95.987	ENSMUSG00000067148	Polr1c	100	96.154	Mus_musculus
ENSCGRG00000013225	Polr1c	100	95.652	MGP_PahariEiJ_G0020654	Polr1c	100	95.385	Mus_pahari
ENSCGRG00000013225	Polr1c	100	96.321	MGP_SPRETEiJ_G0022574	Polr1c	100	96.538	Mus_spretus
ENSCGRG00000013225	Polr1c	100	94.649	ENSMPUG00000012916	POLR1C	79	94.649	Mustela_putorius_furo
ENSCGRG00000013225	Polr1c	100	95.318	ENSMLUG00000017751	POLR1C	86	95.318	Myotis_lucifugus
ENSCGRG00000013225	Polr1c	100	93.980	ENSNGAG00000023487	Polr1c	100	93.814	Nannospalax_galili
ENSCGRG00000013225	Polr1c	100	71.947	ENSNBRG00000018742	polr1c	86	72.607	Neolamprologus_brichardi
ENSCGRG00000013225	Polr1c	58	32.386	ENSNLEG00000003034	POLR2C	63	32.386	Nomascus_leucogenys
ENSCGRG00000013225	Polr1c	100	95.318	ENSNLEG00000004035	POLR1C	86	95.318	Nomascus_leucogenys
ENSCGRG00000013225	Polr1c	99	73.490	ENSMEUG00000006778	POLR1C	86	73.490	Notamacropus_eugenii
ENSCGRG00000013225	Polr1c	74	93.213	ENSOPRG00000000145	POLR1C	82	93.213	Ochotona_princeps
ENSCGRG00000013225	Polr1c	100	93.311	ENSODEG00000015831	-	86	93.311	Octodon_degus
ENSCGRG00000013225	Polr1c	73	91.324	ENSODEG00000017109	-	100	91.324	Octodon_degus
ENSCGRG00000013225	Polr1c	100	72.277	ENSONIG00000013133	polr1c	85	72.937	Oreochromis_niloticus
ENSCGRG00000013225	Polr1c	100	83.612	ENSOANG00000003043	POLR1C	86	83.612	Ornithorhynchus_anatinus
ENSCGRG00000013225	Polr1c	100	94.314	ENSOCUG00000005504	POLR1C	86	94.314	Oryctolagus_cuniculus
ENSCGRG00000013225	Polr1c	99	71.186	ENSORLG00000019743	polr1c	86	71.186	Oryzias_latipes
ENSCGRG00000013225	Polr1c	99	71.525	ENSORLG00020006489	POLR1C	87	71.525	Oryzias_latipes_hni
ENSCGRG00000013225	Polr1c	75	58.952	ENSORLG00020005555	polr1c	68	58.952	Oryzias_latipes_hni
ENSCGRG00000013225	Polr1c	99	70.234	ENSORLG00015013322	polr1c	85	70.234	Oryzias_latipes_hsok
ENSCGRG00000013225	Polr1c	99	71.237	ENSOMEG00000016527	polr1c	85	71.237	Oryzias_melastigma
ENSCGRG00000013225	Polr1c	100	93.023	ENSOGAG00000016318	POLR1C	86	93.023	Otolemur_garnettii
ENSCGRG00000013225	Polr1c	100	93.645	ENSOARG00000007503	POLR1C	86	93.645	Ovis_aries
ENSCGRG00000013225	Polr1c	100	95.318	ENSPPAG00000043678	POLR1C	86	95.318	Pan_paniscus
ENSCGRG00000013225	Polr1c	65	31.313	ENSPPAG00000042822	POLR2C	69	31.313	Pan_paniscus
ENSCGRG00000013225	Polr1c	100	93.645	ENSPPRG00000009760	POLR1C	86	93.645	Panthera_pardus
ENSCGRG00000013225	Polr1c	100	93.645	ENSPTIG00000014813	POLR1C	86	93.645	Panthera_tigris_altaica
ENSCGRG00000013225	Polr1c	100	95.318	ENSPTRG00000018202	POLR1C	86	95.318	Pan_troglodytes
ENSCGRG00000013225	Polr1c	100	94.649	ENSPANG00000009025	POLR1C	85	94.649	Papio_anubis
ENSCGRG00000013225	Polr1c	99	75.503	ENSPKIG00000009858	polr1c	86	75.503	Paramormyrops_kingsleyae
ENSCGRG00000013225	Polr1c	100	82.609	ENSPSIG00000012580	POLR1C	81	82.609	Pelodiscus_sinensis
ENSCGRG00000013225	Polr1c	100	59.197	ENSPMGG00000012121	polr1c	84	59.197	Periophthalmus_magnuspinnatus
ENSCGRG00000013225	Polr1c	65	32.161	ENSPMGG00000021249	polr2c	77	32.161	Periophthalmus_magnuspinnatus
ENSCGRG00000013225	Polr1c	100	98.328	ENSPEMG00000006970	Polr1c	86	98.328	Peromyscus_maniculatus_bairdii
ENSCGRG00000013225	Polr1c	64	31.472	ENSPMAG00000004827	polr2c	81	31.472	Petromyzon_marinus
ENSCGRG00000013225	Polr1c	100	72.517	ENSPMAG00000005560	polr1c	86	72.517	Petromyzon_marinus
ENSCGRG00000013225	Polr1c	99	88.926	ENSPCIG00000028137	POLR1C	85	88.926	Phascolarctos_cinereus
ENSCGRG00000013225	Polr1c	100	71.947	ENSPFOG00000014357	polr1c	85	72.277	Poecilia_formosa
ENSCGRG00000013225	Polr1c	100	71.947	ENSPFOG00000014342	POLR1C	86	72.277	Poecilia_formosa
ENSCGRG00000013225	Polr1c	80	65.272	ENSPLAG00000004111	polr1c	99	65.272	Poecilia_latipinna
ENSCGRG00000013225	Polr1c	100	71.947	ENSPMEG00000011877	-	86	72.277	Poecilia_mexicana
ENSCGRG00000013225	Polr1c	100	71.947	ENSPMEG00000008420	polr1c	86	72.277	Poecilia_mexicana
ENSCGRG00000013225	Polr1c	100	72.910	ENSPREG00000007985	polr1c	86	72.910	Poecilia_reticulata
ENSCGRG00000013225	Polr1c	100	94.983	ENSPPYG00000016645	POLR1C	88	94.983	Pongo_abelii
ENSCGRG00000013225	Polr1c	100	94.314	ENSPCOG00000024628	POLR1C	86	94.314	Propithecus_coquereli
ENSCGRG00000013225	Polr1c	100	84.615	ENSPVAG00000005689	POLR1C	86	84.615	Pteropus_vampyrus
ENSCGRG00000013225	Polr1c	100	71.947	ENSPNYG00000003620	polr1c	86	72.607	Pundamilia_nyererei
ENSCGRG00000013225	Polr1c	100	73.913	ENSPNAG00000008443	polr1c	93	73.913	Pygocentrus_nattereri
ENSCGRG00000013225	Polr1c	100	96.321	ENSRNOG00000019079	Polr1c	100	95.769	Rattus_norvegicus
ENSCGRG00000013225	Polr1c	100	94.649	ENSRBIG00000007155	POLR1C	86	94.649	Rhinopithecus_bieti
ENSCGRG00000013225	Polr1c	100	94.649	ENSRROG00000000257	POLR1C	86	94.649	Rhinopithecus_roxellana
ENSCGRG00000013225	Polr1c	63	31.053	YIL021W	RPB3	55	31.053	Saccharomyces_cerevisiae
ENSCGRG00000013225	Polr1c	96	47.751	YPR110C	RPC40	86	47.751	Saccharomyces_cerevisiae
ENSCGRG00000013225	Polr1c	100	95.318	ENSSBOG00000025735	POLR1C	84	95.000	Saimiri_boliviensis_boliviensis
ENSCGRG00000013225	Polr1c	89	87.970	ENSSHAG00000014456	POLR1C	78	87.970	Sarcophilus_harrisii
ENSCGRG00000013225	Polr1c	100	75.251	ENSSFOG00015019860	polr1c	86	75.251	Scleropages_formosus
ENSCGRG00000013225	Polr1c	100	72.575	ENSSMAG00000018865	polr1c	86	72.575	Scophthalmus_maximus
ENSCGRG00000013225	Polr1c	100	72.607	ENSSDUG00000015745	polr1c	79	73.267	Seriola_dumerili
ENSCGRG00000013225	Polr1c	100	72.607	ENSSLDG00000018285	polr1c	79	73.267	Seriola_lalandi_dorsalis
ENSCGRG00000013225	Polr1c	99	79.798	ENSSPUG00000011822	POLR1C	86	79.798	Sphenodon_punctatus
ENSCGRG00000013225	Polr1c	99	71.854	ENSSPAG00000022369	polr1c	86	72.517	Stegastes_partitus
ENSCGRG00000013225	Polr1c	100	93.645	ENSSSCG00000028007	POLR1C	96	93.645	Sus_scrofa
ENSCGRG00000013225	Polr1c	64	31.795	ENSTGUG00000004996	POLR2C	67	31.795	Taeniopygia_guttata
ENSCGRG00000013225	Polr1c	99	81.544	ENSTGUG00000009159	POLR1C	88	81.544	Taeniopygia_guttata
ENSCGRG00000013225	Polr1c	99	69.205	ENSTRUG00000006264	polr1c	86	69.205	Takifugu_rubripes
ENSCGRG00000013225	Polr1c	60	95.506	ENSTBEG00000002254	POLR1C	100	95.506	Tupaia_belangeri
ENSCGRG00000013225	Polr1c	88	91.255	ENSTTRG00000006344	POLR1C	76	91.255	Tursiops_truncatus
ENSCGRG00000013225	Polr1c	100	94.314	ENSUAMG00000025602	POLR1C	86	94.314	Ursus_americanus
ENSCGRG00000013225	Polr1c	100	94.314	ENSUMAG00000005938	POLR1C	86	94.314	Ursus_maritimus
ENSCGRG00000013225	Polr1c	100	90.635	ENSVVUG00000028922	POLR1C	86	90.635	Vulpes_vulpes
ENSCGRG00000013225	Polr1c	100	78.000	ENSXETG00000010882	polr1c	86	78.000	Xenopus_tropicalis
ENSCGRG00000013225	Polr1c	100	73.000	ENSXCOG00000014185	polr1c	86	73.000	Xiphophorus_couchianus
ENSCGRG00000013225	Polr1c	100	71.617	ENSXMAG00000015076	polr1c	86	72.277	Xiphophorus_maculatus