EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000013311 (Gene tree)
Gene ID: -
Gene Symbol: Lsm2
Alias: D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP
Full Name: LSM2 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 1308 bases
Position: chrJH000969.1:373771-375078
Accession: 90676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000018295	LSM	PF01423.22	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000018562	-	1121	-	ENSCGRP00000018295	116 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000013311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000013311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000013311	Lsm2	57	31.818	ENSCGRG00000015514	-	52	31.818
ENSCGRG00000013311	Lsm2	57	31.818	ENSCGRG00000014935	-	52	31.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000013311	Lsm2	62	100.000	ENSG00000204392	LSM2	76	100.000	Homo_sapiens
ENSCGRG00000013311	Lsm2	62	98.611	ENSAPOG00000017967	si:ch73-14h10.2	76	98.611	Acanthochromis_polyacanthus
ENSCGRG00000013311	Lsm2	62	100.000	ENSAMEG00000006483	LSM2	77	100.000	Ailuropoda_melanoleuca
ENSCGRG00000013311	Lsm2	62	98.611	ENSAOCG00000006949	si:ch73-14h10.2	60	98.611	Amphiprion_ocellaris
ENSCGRG00000013311	Lsm2	62	98.611	ENSAPEG00000020375	si:ch73-14h10.2	67	98.611	Amphiprion_percula
ENSCGRG00000013311	Lsm2	62	98.611	ENSATEG00000011376	si:ch73-14h10.2	76	98.611	Anabas_testudineus
ENSCGRG00000013311	Lsm2	62	100.000	ENSACAG00000017281	LSM2	69	100.000	Anolis_carolinensis
ENSCGRG00000013311	Lsm2	62	94.444	ENSANAG00000028033	-	77	94.444	Aotus_nancymaae
ENSCGRG00000013311	Lsm2	62	100.000	ENSANAG00000028372	LSM2	99	97.297	Aotus_nancymaae
ENSCGRG00000013311	Lsm2	62	98.611	ENSACLG00000024717	smx5	76	98.611	Astatotilapia_calliptera
ENSCGRG00000013311	Lsm2	62	98.611	ENSAMXG00000036868	si:ch73-14h10.2	76	98.611	Astyanax_mexicanus
ENSCGRG00000013311	Lsm2	62	100.000	ENSBTAG00000005634	LSM2	76	100.000	Bos_taurus
ENSCGRG00000013311	Lsm2	61	80.282	WBGene00001808	gut-2	73	80.282	Caenorhabditis_elegans
ENSCGRG00000013311	Lsm2	62	100.000	ENSCJAG00000040899	LSM2	76	100.000	Callithrix_jacchus
ENSCGRG00000013311	Lsm2	67	93.590	ENSCAFG00020016978	-	93	93.590	Canis_lupus_dingo
ENSCGRG00000013311	Lsm2	62	100.000	ENSCHIG00000016153	LSM2	77	100.000	Capra_hircus
ENSCGRG00000013311	Lsm2	61	85.915	ENSTSYG00000030015	-	90	85.915	Carlito_syrichta
ENSCGRG00000013311	Lsm2	62	100.000	ENSTSYG00000034844	LSM2	76	100.000	Carlito_syrichta
ENSCGRG00000013311	Lsm2	66	97.403	ENSCAPG00000009970	LSM2	99	97.403	Cavia_aperea
ENSCGRG00000013311	Lsm2	62	100.000	ENSCPOG00000021053	LSM2	76	100.000	Cavia_porcellus
ENSCGRG00000013311	Lsm2	62	100.000	ENSCCAG00000024276	LSM2	76	100.000	Cebus_capucinus
ENSCGRG00000013311	Lsm2	62	100.000	ENSCATG00000013737	LSM2	76	100.000	Cercocebus_atys
ENSCGRG00000013311	Lsm2	62	100.000	ENSCLAG00000008081	LSM2	76	100.000	Chinchilla_lanigera
ENSCGRG00000013311	Lsm2	62	100.000	ENSCSAG00000008800	LSM2	76	100.000	Chlorocebus_sabaeus
ENSCGRG00000013311	Lsm2	62	100.000	ENSCHOG00000007702	LSM2	76	100.000	Choloepus_hoffmanni
ENSCGRG00000013311	Lsm2	62	94.444	ENSCING00000022677	-	76	94.444	Ciona_intestinalis
ENSCGRG00000013311	Lsm2	62	100.000	ENSCANG00000039576	LSM2	76	100.000	Colobus_angolensis_palliatus
ENSCGRG00000013311	Lsm2	62	100.000	ENSCGRG00001013932	Lsm2	76	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000013311	Lsm2	62	98.611	ENSCSEG00000002911	si:ch73-14h10.2	76	98.611	Cynoglossus_semilaevis
ENSCGRG00000013311	Lsm2	62	98.611	ENSCVAG00000015394	si:ch73-14h10.2	68	98.611	Cyprinodon_variegatus
ENSCGRG00000013311	Lsm2	62	98.611	ENSDARG00000070867	smx5	76	98.611	Danio_rerio
ENSCGRG00000013311	Lsm2	62	100.000	ENSDNOG00000002633	LSM2	77	100.000	Dasypus_novemcinctus
ENSCGRG00000013311	Lsm2	62	100.000	ENSDORG00000026571	Lsm2	76	100.000	Dipodomys_ordii
ENSCGRG00000013311	Lsm2	59	95.588	FBgn0036277	CG10418	72	95.588	Drosophila_melanogaster
ENSCGRG00000013311	Lsm2	62	100.000	ENSEASG00005015670	LSM2	61	100.000	Equus_asinus_asinus
ENSCGRG00000013311	Lsm2	62	100.000	ENSECAG00000018791	LSM2	61	100.000	Equus_caballus
ENSCGRG00000013311	Lsm2	62	100.000	ENSELUG00000008241	smx5	76	100.000	Esox_lucius
ENSCGRG00000013311	Lsm2	62	100.000	ENSFCAG00000045887	LSM2	76	100.000	Felis_catus
ENSCGRG00000013311	Lsm2	62	100.000	ENSFDAG00000000390	LSM2	76	100.000	Fukomys_damarensis
ENSCGRG00000013311	Lsm2	63	94.667	ENSFHEG00000009619	si:ch73-14h10.2	79	94.667	Fundulus_heteroclitus
ENSCGRG00000013311	Lsm2	62	98.611	ENSGMOG00000019208	si:ch73-14h10.2	77	98.611	Gadus_morhua
ENSCGRG00000013311	Lsm2	62	98.611	ENSGAFG00000017286	si:ch73-14h10.2	76	98.611	Gambusia_affinis
ENSCGRG00000013311	Lsm2	62	98.611	ENSGACG00000003827	si:ch73-14h10.2	76	98.611	Gasterosteus_aculeatus
ENSCGRG00000013311	Lsm2	62	100.000	ENSGAGG00000012458	LSM2	76	100.000	Gopherus_agassizii
ENSCGRG00000013311	Lsm2	62	100.000	ENSGGOG00000011383	LSM2	76	100.000	Gorilla_gorilla
ENSCGRG00000013311	Lsm2	62	100.000	ENSHGLG00000011299	LSM2	76	100.000	Heterocephalus_glaber_female
ENSCGRG00000013311	Lsm2	62	100.000	ENSHGLG00100017194	LSM2	76	100.000	Heterocephalus_glaber_male
ENSCGRG00000013311	Lsm2	62	98.611	ENSHCOG00000014057	si:ch73-14h10.2	76	98.611	Hippocampus_comes
ENSCGRG00000013311	Lsm2	62	98.611	ENSIPUG00000010539	lsm2	76	98.611	Ictalurus_punctatus
ENSCGRG00000013311	Lsm2	62	100.000	ENSSTOG00000013144	LSM2	76	100.000	Ictidomys_tridecemlineatus
ENSCGRG00000013311	Lsm2	62	72.222	ENSJJAG00000019477	-	75	72.222	Jaculus_jaculus
ENSCGRG00000013311	Lsm2	62	98.611	ENSKMAG00000014909	si:ch73-14h10.2	76	98.611	Kryptolebias_marmoratus
ENSCGRG00000013311	Lsm2	63	97.260	ENSLBEG00000025781	si:ch73-14h10.2	77	97.260	Labrus_bergylta
ENSCGRG00000013311	Lsm2	62	98.611	ENSLACG00000015064	LSM2	76	98.611	Latimeria_chalumnae
ENSCGRG00000013311	Lsm2	62	98.611	ENSLOCG00000005228	si:ch73-14h10.2	76	98.611	Lepisosteus_oculatus
ENSCGRG00000013311	Lsm2	62	100.000	ENSLAFG00000016139	LSM2	77	100.000	Loxodonta_africana
ENSCGRG00000013311	Lsm2	62	100.000	ENSMFAG00000001016	LSM2	76	100.000	Macaca_fascicularis
ENSCGRG00000013311	Lsm2	62	100.000	ENSMMUG00000006832	LSM2	76	100.000	Macaca_mulatta
ENSCGRG00000013311	Lsm2	62	84.722	ENSMMUG00000045473	-	79	84.722	Macaca_mulatta
ENSCGRG00000013311	Lsm2	69	80.000	ENSMNEG00000040973	-	98	80.000	Macaca_nemestrina
ENSCGRG00000013311	Lsm2	62	100.000	ENSMNEG00000045355	LSM2	76	100.000	Macaca_nemestrina
ENSCGRG00000013311	Lsm2	62	100.000	ENSMLEG00000037369	-	76	100.000	Mandrillus_leucophaeus
ENSCGRG00000013311	Lsm2	69	78.750	ENSMLEG00000031181	-	98	78.750	Mandrillus_leucophaeus
ENSCGRG00000013311	Lsm2	62	98.611	ENSMAMG00000010053	si:ch73-14h10.2	55	98.611	Mastacembelus_armatus
ENSCGRG00000013311	Lsm2	62	95.946	ENSMZEG00005008688	si:ch73-14h10.2	77	95.946	Maylandia_zebra
ENSCGRG00000013311	Lsm2	62	100.000	ENSMAUG00000021966	Lsm2	76	100.000	Mesocricetus_auratus
ENSCGRG00000013311	Lsm2	66	80.263	ENSMICG00000046764	-	97	80.263	Microcebus_murinus
ENSCGRG00000013311	Lsm2	62	100.000	ENSMOCG00000015306	Lsm2	76	100.000	Microtus_ochrogaster
ENSCGRG00000013311	Lsm2	63	97.260	ENSMMOG00000005603	si:ch73-14h10.2	78	97.260	Mola_mola
ENSCGRG00000013311	Lsm2	62	98.611	ENSMODG00000015177	LSM2	76	98.611	Monodelphis_domestica
ENSCGRG00000013311	Lsm2	62	98.611	ENSMALG00000016490	si:ch73-14h10.2	76	98.611	Monopterus_albus
ENSCGRG00000013311	Lsm2	62	100.000	MGP_CAROLIEiJ_G0021490	Lsm2	76	100.000	Mus_caroli
ENSCGRG00000013311	Lsm2	62	100.000	ENSMUSG00000007050	Lsm2	76	100.000	Mus_musculus
ENSCGRG00000013311	Lsm2	62	100.000	MGP_PahariEiJ_G0020485	Lsm2	76	100.000	Mus_pahari
ENSCGRG00000013311	Lsm2	62	100.000	MGP_SPRETEiJ_G0022395	Lsm2	76	100.000	Mus_spretus
ENSCGRG00000013311	Lsm2	62	100.000	ENSNGAG00000003997	Lsm2	76	100.000	Nannospalax_galili
ENSCGRG00000013311	Lsm2	62	98.611	ENSNBRG00000012904	si:ch73-14h10.2	83	98.611	Neolamprologus_brichardi
ENSCGRG00000013311	Lsm2	62	100.000	ENSNLEG00000035542	LSM2	76	100.000	Nomascus_leucogenys
ENSCGRG00000013311	Lsm2	61	98.592	ENSMEUG00000003419	LSM2	100	98.592	Notamacropus_eugenii
ENSCGRG00000013311	Lsm2	62	100.000	ENSOPRG00000003668	LSM2	76	100.000	Ochotona_princeps
ENSCGRG00000013311	Lsm2	62	100.000	ENSODEG00000017583	LSM2	76	100.000	Octodon_degus
ENSCGRG00000013311	Lsm2	62	98.611	ENSONIG00000019321	si:ch73-14h10.2	76	98.611	Oreochromis_niloticus
ENSCGRG00000013311	Lsm2	62	100.000	ENSOANG00000005398	LSM2	77	100.000	Ornithorhynchus_anatinus
ENSCGRG00000013311	Lsm2	62	100.000	ENSOCUG00000002583	LSM2	76	100.000	Oryctolagus_cuniculus
ENSCGRG00000013311	Lsm2	62	98.611	ENSORLG00000029858	si:ch73-14h10.2	76	98.611	Oryzias_latipes
ENSCGRG00000013311	Lsm2	62	70.297	ENSORLG00015000465	si:ch73-14h10.2	81	70.297	Oryzias_latipes_hsok
ENSCGRG00000013311	Lsm2	62	98.611	ENSOMEG00000002892	si:ch73-14h10.2	76	98.611	Oryzias_melastigma
ENSCGRG00000013311	Lsm2	62	100.000	ENSOARG00000004575	LSM2	77	100.000	Ovis_aries
ENSCGRG00000013311	Lsm2	62	86.111	ENSPPAG00000043941	-	89	86.111	Pan_paniscus
ENSCGRG00000013311	Lsm2	62	100.000	ENSPPAG00000032431	LSM2	76	100.000	Pan_paniscus
ENSCGRG00000013311	Lsm2	62	100.000	ENSPPRG00000015353	LSM2	76	100.000	Panthera_pardus
ENSCGRG00000013311	Lsm2	62	100.000	ENSPTIG00000010303	LSM2	76	100.000	Panthera_tigris_altaica
ENSCGRG00000013311	Lsm2	62	100.000	ENSPTRG00000017986	LSM2	76	100.000	Pan_troglodytes
ENSCGRG00000013311	Lsm2	62	100.000	ENSPANG00000024577	LSM2	76	100.000	Papio_anubis
ENSCGRG00000013311	Lsm2	62	98.611	ENSPKIG00000007028	si:ch73-14h10.2	76	98.611	Paramormyrops_kingsleyae
ENSCGRG00000013311	Lsm2	62	100.000	ENSPSIG00000004458	LSM2	60	100.000	Pelodiscus_sinensis
ENSCGRG00000013311	Lsm2	63	95.890	ENSPMGG00000018511	si:ch73-14h10.2	78	95.890	Periophthalmus_magnuspinnatus
ENSCGRG00000013311	Lsm2	62	98.611	ENSPCIG00000018560	-	73	98.611	Phascolarctos_cinereus
ENSCGRG00000013311	Lsm2	62	98.611	ENSPFOG00000001621	si:ch73-14h10.2	76	98.611	Poecilia_formosa
ENSCGRG00000013311	Lsm2	62	98.611	ENSPLAG00000017165	si:ch73-14h10.2	76	98.611	Poecilia_latipinna
ENSCGRG00000013311	Lsm2	62	98.611	ENSPMEG00000019574	si:ch73-14h10.2	76	98.611	Poecilia_mexicana
ENSCGRG00000013311	Lsm2	63	97.260	ENSPREG00000016534	si:ch73-14h10.2	78	97.260	Poecilia_reticulata
ENSCGRG00000013311	Lsm2	62	100.000	ENSPCAG00000013737	LSM2	76	100.000	Procavia_capensis
ENSCGRG00000013311	Lsm2	62	100.000	ENSPCOG00000020134	LSM2	76	100.000	Propithecus_coquereli
ENSCGRG00000013311	Lsm2	62	100.000	ENSPVAG00000012405	LSM2	76	100.000	Pteropus_vampyrus
ENSCGRG00000013311	Lsm2	62	98.611	ENSPNYG00000019298	smx5	76	98.611	Pundamilia_nyererei
ENSCGRG00000013311	Lsm2	62	98.611	ENSPNAG00000027769	si:ch73-14h10.2	76	98.611	Pygocentrus_nattereri
ENSCGRG00000013311	Lsm2	62	100.000	ENSRNOG00000048725	Lsm2	76	100.000	Rattus_norvegicus
ENSCGRG00000013311	Lsm2	62	100.000	ENSRBIG00000010172	LSM2	76	100.000	Rhinopithecus_bieti
ENSCGRG00000013311	Lsm2	69	81.250	ENSRBIG00000011356	-	98	81.250	Rhinopithecus_bieti
ENSCGRG00000013311	Lsm2	69	81.250	ENSRROG00000030708	-	98	81.250	Rhinopithecus_roxellana
ENSCGRG00000013311	Lsm2	62	100.000	ENSRROG00000030345	LSM2	76	100.000	Rhinopithecus_roxellana
ENSCGRG00000013311	Lsm2	62	59.722	YBL026W	LSM2	76	59.722	Saccharomyces_cerevisiae
ENSCGRG00000013311	Lsm2	62	100.000	ENSSBOG00000018943	LSM2	97	94.805	Saimiri_boliviensis_boliviensis
ENSCGRG00000013311	Lsm2	62	98.611	ENSSFOG00015006734	lsm2	76	98.611	Scleropages_formosus
ENSCGRG00000013311	Lsm2	62	98.611	ENSSMAG00000001122	si:ch73-14h10.2	76	98.611	Scophthalmus_maximus
ENSCGRG00000013311	Lsm2	62	98.611	ENSSDUG00000021605	smx5	76	98.611	Seriola_dumerili
ENSCGRG00000013311	Lsm2	62	98.611	ENSSLDG00000002765	si:ch73-14h10.2	76	98.611	Seriola_lalandi_dorsalis
ENSCGRG00000013311	Lsm2	62	98.611	ENSSPUG00000009631	LSM2	76	98.611	Sphenodon_punctatus
ENSCGRG00000013311	Lsm2	62	98.611	ENSSPAG00000016904	si:ch73-14h10.2	76	98.611	Stegastes_partitus
ENSCGRG00000013311	Lsm2	62	100.000	ENSSSCG00000039021	LSM2	76	100.000	Sus_scrofa
ENSCGRG00000013311	Lsm2	63	97.260	ENSTRUG00000002093	si:ch73-14h10.2	78	97.260	Takifugu_rubripes
ENSCGRG00000013311	Lsm2	62	100.000	ENSTTRG00000014131	LSM2	76	100.000	Tursiops_truncatus
ENSCGRG00000013311	Lsm2	62	100.000	ENSUMAG00000013425	LSM2	50	100.000	Ursus_maritimus
ENSCGRG00000013311	Lsm2	62	100.000	ENSVPAG00000001761	LSM2	77	100.000	Vicugna_pacos
ENSCGRG00000013311	Lsm2	62	98.611	ENSVVUG00000016264	-	89	98.611	Vulpes_vulpes
ENSCGRG00000013311	Lsm2	62	98.611	ENSXETG00000024077	lsm2	76	98.611	Xenopus_tropicalis
ENSCGRG00000013311	Lsm2	63	97.260	ENSXCOG00000006078	si:ch73-14h10.2	78	97.260	Xiphophorus_couchianus
ENSCGRG00000013311	Lsm2	63	97.260	ENSXMAG00000028018	si:ch73-14h10.2	78	97.260	Xiphophorus_maculatus