EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000013351 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|CAGH26|D130023A07Rik|Tnrc6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 78581 bases
Position: chrJH001689.1:51425-130005
Accession: 100758607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000018346	Ago_hook	PF10427.9	9.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000018614	-	5682	XM_007652400	ENSCGRP00000018346	1893 (aa)	XP_007650590	-
ENSCGRT00000018615	-	201	-	ENSCGRP00000018347	67 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000013351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000013351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000013351	Tnrc6a	98	36.829	ENSCGRG00000016696	Tnrc6b	99	37.601
ENSCGRG00000013351	Tnrc6a	98	38.659	ENSCGRG00000018041	Tnrc6c	99	40.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000013351	Tnrc6a	99	93.410	ENSG00000090905	TNRC6A	100	94.375	Homo_sapiens
ENSCGRG00000013351	Tnrc6a	97	90.771	ENSAMEG00000009333	TNRC6A	99	90.928	Ailuropoda_melanoleuca
ENSCGRG00000013351	Tnrc6a	97	77.888	ENSAPLG00000009978	TNRC6A	100	77.627	Anas_platyrhynchos
ENSCGRG00000013351	Tnrc6a	99	52.764	ENSACAG00000011857	TNRC6A	99	54.301	Anolis_carolinensis
ENSCGRG00000013351	Tnrc6a	99	93.603	ENSANAG00000025252	TNRC6A	99	93.655	Aotus_nancymaae
ENSCGRG00000013351	Tnrc6a	91	56.594	ENSAMXG00000019919	tnrc6a	99	56.752	Astyanax_mexicanus
ENSCGRG00000013351	Tnrc6a	99	92.441	ENSBTAG00000017999	TNRC6A	99	91.959	Bos_taurus
ENSCGRG00000013351	Tnrc6a	99	91.181	ENSCJAG00000020677	TNRC6A	99	92.264	Callithrix_jacchus
ENSCGRG00000013351	Tnrc6a	97	92.892	ENSCAFG00000017531	TNRC6A	99	93.107	Canis_familiaris
ENSCGRG00000013351	Tnrc6a	98	90.793	ENSCAFG00020021160	TNRC6A	99	91.922	Canis_lupus_dingo
ENSCGRG00000013351	Tnrc6a	99	92.441	ENSCHIG00000019448	TNRC6A	99	92.433	Capra_hircus
ENSCGRG00000013351	Tnrc6a	99	93.291	ENSTSYG00000012711	TNRC6A	99	93.501	Carlito_syrichta
ENSCGRG00000013351	Tnrc6a	99	93.386	ENSCPOG00000036684	TNRC6A	100	93.491	Cavia_porcellus
ENSCGRG00000013351	Tnrc6a	99	93.714	ENSCCAG00000033664	TNRC6A	99	93.819	Cebus_capucinus
ENSCGRG00000013351	Tnrc6a	99	93.120	ENSCATG00000019284	TNRC6A	99	93.330	Cercocebus_atys
ENSCGRG00000013351	Tnrc6a	99	88.732	ENSCLAG00000010217	TNRC6A	99	89.203	Chinchilla_lanigera
ENSCGRG00000013351	Tnrc6a	99	91.220	ENSCSAG00000006561	TNRC6A	99	91.373	Chlorocebus_sabaeus
ENSCGRG00000013351	Tnrc6a	95	85.646	ENSCHOG00000009374	TNRC6A	94	85.782	Choloepus_hoffmanni
ENSCGRG00000013351	Tnrc6a	91	80.716	ENSCPBG00000001881	TNRC6A	99	80.600	Chrysemys_picta_bellii
ENSCGRG00000013351	Tnrc6a	99	93.763	ENSCANG00000041549	TNRC6A	99	93.973	Colobus_angolensis_palliatus
ENSCGRG00000013351	Tnrc6a	99	99.369	ENSCGRG00001015021	Tnrc6a	99	99.369	Cricetulus_griseus_chok1gshd
ENSCGRG00000013351	Tnrc6a	91	56.831	ENSDARG00000079688	tnrc6a	99	56.895	Danio_rerio
ENSCGRG00000013351	Tnrc6a	97	89.087	ENSDNOG00000013989	TNRC6A	99	88.982	Dasypus_novemcinctus
ENSCGRG00000013351	Tnrc6a	97	82.702	ENSETEG00000014658	TNRC6A	99	82.545	Echinops_telfairi
ENSCGRG00000013351	Tnrc6a	99	93.911	ENSEASG00005017693	TNRC6A	99	93.963	Equus_asinus_asinus
ENSCGRG00000013351	Tnrc6a	97	94.064	ENSECAG00000025056	TNRC6A	99	94.118	Equus_caballus
ENSCGRG00000013351	Tnrc6a	97	84.031	ENSEEUG00000004530	TNRC6A	99	84.188	Erinaceus_europaeus
ENSCGRG00000013351	Tnrc6a	99	92.021	ENSFCAG00000025236	TNRC6A	99	92.126	Felis_catus
ENSCGRG00000013351	Tnrc6a	99	74.962	ENSFALG00000003757	TNRC6A	99	75.808	Ficedula_albicollis
ENSCGRG00000013351	Tnrc6a	91	80.692	ENSGALG00000006068	TNRC6A	99	80.865	Gallus_gallus
ENSCGRG00000013351	Tnrc6a	91	79.988	ENSGAGG00000023209	TNRC6A	99	80.161	Gopherus_agassizii
ENSCGRG00000013351	Tnrc6a	99	93.200	ENSGGOG00000005137	TNRC6A	99	93.411	Gorilla_gorilla
ENSCGRG00000013351	Tnrc6a	99	92.053	ENSHGLG00000012474	-	100	92.053	Heterocephalus_glaber_female
ENSCGRG00000013351	Tnrc6a	95	72.727	ENSHGLG00000007368	-	93	72.636	Heterocephalus_glaber_female
ENSCGRG00000013351	Tnrc6a	99	91.421	ENSHGLG00100012496	-	100	91.421	Heterocephalus_glaber_male
ENSCGRG00000013351	Tnrc6a	99	90.122	ENSSTOG00000023394	TNRC6A	99	90.224	Ictidomys_tridecemlineatus
ENSCGRG00000013351	Tnrc6a	97	67.184	ENSLACG00000006277	TNRC6A	100	67.236	Latimeria_chalumnae
ENSCGRG00000013351	Tnrc6a	99	82.561	ENSLOCG00000005517	tnrc6a	93	82.561	Lepisosteus_oculatus
ENSCGRG00000013351	Tnrc6a	97	92.876	ENSLAFG00000004209	TNRC6A	99	92.822	Loxodonta_africana
ENSCGRG00000013351	Tnrc6a	99	93.449	ENSMMUG00000020428	TNRC6A	99	93.763	Macaca_mulatta
ENSCGRG00000013351	Tnrc6a	99	93.535	ENSMNEG00000034854	TNRC6A	99	93.483	Macaca_nemestrina
ENSCGRG00000013351	Tnrc6a	99	75.822	ENSMGAG00000006455	TNRC6A	99	76.075	Meleagris_gallopavo
ENSCGRG00000013351	Tnrc6a	99	97.793	ENSMAUG00000012750	Tnrc6a	99	97.793	Mesocricetus_auratus
ENSCGRG00000013351	Tnrc6a	99	94.299	ENSMICG00000030685	TNRC6A	99	94.404	Microcebus_murinus
ENSCGRG00000013351	Tnrc6a	99	97.057	ENSMOCG00000000152	Tnrc6a	99	97.057	Microtus_ochrogaster
ENSCGRG00000013351	Tnrc6a	99	77.003	ENSMODG00000016348	TNRC6A	99	77.601	Monodelphis_domestica
ENSCGRG00000013351	Tnrc6a	99	94.439	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	94.544	Mus_caroli
ENSCGRG00000013351	Tnrc6a	99	95.691	ENSMUSG00000052707	Tnrc6a	99	95.691	Mus_musculus
ENSCGRG00000013351	Tnrc6a	99	95.818	MGP_PahariEiJ_G0013635	Tnrc6a	99	95.818	Mus_pahari
ENSCGRG00000013351	Tnrc6a	99	92.674	MGP_SPRETEiJ_G0031539	Tnrc6a	100	91.851	Mus_spretus
ENSCGRG00000013351	Tnrc6a	97	82.347	ENSMPUG00000012324	TNRC6A	100	82.024	Mustela_putorius_furo
ENSCGRG00000013351	Tnrc6a	97	88.381	ENSMLUG00000002701	TNRC6A	100	88.065	Myotis_lucifugus
ENSCGRG00000013351	Tnrc6a	99	94.544	ENSNGAG00000020702	Tnrc6a	100	94.281	Nannospalax_galili
ENSCGRG00000013351	Tnrc6a	97	92.026	ENSNLEG00000011851	TNRC6A	98	92.080	Nomascus_leucogenys
ENSCGRG00000013351	Tnrc6a	77	82.080	ENSMEUG00000015959	-	77	81.748	Notamacropus_eugenii
ENSCGRG00000013351	Tnrc6a	96	98.881	ENSOPRG00000005819	TNRC6A	96	98.881	Ochotona_princeps
ENSCGRG00000013351	Tnrc6a	99	88.453	ENSODEG00000012802	TNRC6A	99	88.129	Octodon_degus
ENSCGRG00000013351	Tnrc6a	87	78.865	ENSOANG00000007672	TNRC6A	99	78.542	Ornithorhynchus_anatinus
ENSCGRG00000013351	Tnrc6a	97	88.492	ENSOCUG00000004325	TNRC6A	100	88.282	Oryctolagus_cuniculus
ENSCGRG00000013351	Tnrc6a	99	91.293	ENSOGAG00000006666	TNRC6A	100	91.190	Otolemur_garnettii
ENSCGRG00000013351	Tnrc6a	99	89.311	ENSOARG00000017950	TNRC6A	98	92.782	Ovis_aries
ENSCGRG00000013351	Tnrc6a	99	93.166	ENSPPAG00000028379	TNRC6A	100	93.532	Pan_paniscus
ENSCGRG00000013351	Tnrc6a	99	92.021	ENSPPRG00000005861	TNRC6A	99	92.126	Panthera_pardus
ENSCGRG00000013351	Tnrc6a	99	90.800	ENSPTIG00000006346	TNRC6A	99	90.957	Panthera_tigris_altaica
ENSCGRG00000013351	Tnrc6a	99	89.514	ENSPTRG00000007898	TNRC6A	99	90.994	Pan_troglodytes
ENSCGRG00000013351	Tnrc6a	99	91.123	ENSPANG00000018523	TNRC6A	99	91.332	Papio_anubis
ENSCGRG00000013351	Tnrc6a	87	75.369	ENSPKIG00000012859	tnrc6a	99	75.369	Paramormyrops_kingsleyae
ENSCGRG00000013351	Tnrc6a	77	76.741	ENSPSIG00000003965	TNRC6A	99	76.606	Pelodiscus_sinensis
ENSCGRG00000013351	Tnrc6a	99	97.161	ENSPEMG00000016318	Tnrc6a	100	96.795	Peromyscus_maniculatus_bairdii
ENSCGRG00000013351	Tnrc6a	97	81.153	ENSPCIG00000012106	TNRC6A	99	81.260	Phascolarctos_cinereus
ENSCGRG00000013351	Tnrc6a	99	90.474	ENSPPYG00000007202	TNRC6A	100	90.728	Pongo_abelii
ENSCGRG00000013351	Tnrc6a	95	98.969	ENSPCAG00000008260	TNRC6A	94	98.969	Procavia_capensis
ENSCGRG00000013351	Tnrc6a	99	91.784	ENSPCOG00000010134	TNRC6A	99	91.889	Propithecus_coquereli
ENSCGRG00000013351	Tnrc6a	89	67.796	ENSPVAG00000012066	TNRC6A	99	67.662	Pteropus_vampyrus
ENSCGRG00000013351	Tnrc6a	99	95.402	ENSRNOG00000024737	Tnrc6a	99	95.402	Rattus_norvegicus
ENSCGRG00000013351	Tnrc6a	97	93.750	ENSRBIG00000014222	TNRC6A	99	94.073	Rhinopithecus_bieti
ENSCGRG00000013351	Tnrc6a	99	91.453	ENSRROG00000032360	TNRC6A	99	91.505	Rhinopithecus_roxellana
ENSCGRG00000013351	Tnrc6a	97	90.694	ENSSBOG00000036197	TNRC6A	99	91.755	Saimiri_boliviensis_boliviensis
ENSCGRG00000013351	Tnrc6a	91	82.165	ENSSHAG00000008811	TNRC6A	99	82.450	Sarcophilus_harrisii
ENSCGRG00000013351	Tnrc6a	91	58.384	ENSSFOG00015008920	tnrc6a	99	58.222	Scleropages_formosus
ENSCGRG00000013351	Tnrc6a	71	75.708	ENSSARG00000002479	TNRC6A	89	76.179	Sorex_araneus
ENSCGRG00000013351	Tnrc6a	90	77.189	ENSSPUG00000010525	TNRC6A	100	77.247	Sphenodon_punctatus
ENSCGRG00000013351	Tnrc6a	92	100.000	ENSSSCG00000038870	TNRC6A	99	94.421	Sus_scrofa
ENSCGRG00000013351	Tnrc6a	99	78.329	ENSTGUG00000006142	TNRC6A	99	78.747	Taeniopygia_guttata
ENSCGRG00000013351	Tnrc6a	97	88.836	ENSTBEG00000014965	TNRC6A	99	88.941	Tupaia_belangeri
ENSCGRG00000013351	Tnrc6a	93	89.224	ENSTTRG00000002008	TNRC6A	93	89.116	Tursiops_truncatus
ENSCGRG00000013351	Tnrc6a	79	92.543	ENSUAMG00000006656	-	93	92.477	Ursus_americanus
ENSCGRG00000013351	Tnrc6a	99	89.673	ENSUMAG00000008274	TNRC6A	99	94.724	Ursus_maritimus
ENSCGRG00000013351	Tnrc6a	55	82.633	ENSVPAG00000010764	-	57	82.522	Vicugna_pacos
ENSCGRG00000013351	Tnrc6a	100	92.103	ENSVVUG00000005380	TNRC6A	99	92.155	Vulpes_vulpes
ENSCGRG00000013351	Tnrc6a	94	63.265	ENSXETG00000030437	TNRC6A	99	63.342	Xenopus_tropicalis