EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000013352 (Gene tree)
Gene ID: -
Gene Symbol: Vars
Alias: Bat-6|Bat6|D17H6S56E|G7a|Vars2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 13014 bases
Position: chrJH000969.1:374874-387887
Accession: 100769994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000018348	Anticodon_1	PF08264.13	1.2e-32	1	1
ENSCGRP00000018348	tRNA-synt_1	PF00133.22	1.9e-174	1	2
ENSCGRP00000018348	tRNA-synt_1	PF00133.22	1.9e-174	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000018616	-	4467	XM_016978717	ENSCGRP00000018348	1488 (aa)	XP_016834206	UPI000228A4ED

Gene Model

Click here to download ENSCGRG00000013352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000013352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000013352	Vars	70	47.032	ENSCGRG00000014112	Vars2	92	48.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000013352	Vars	78	88.023	ENSG00000204394	VARS	92	88.023	Homo_sapiens
ENSCGRG00000013352	Vars	77	63.064	ENSAPOG00000020691	vars	91	62.723	Acanthochromis_polyacanthus
ENSCGRG00000013352	Vars	77	63.064	ENSAPOG00000020921	vars	91	62.723	Acanthochromis_polyacanthus
ENSCGRG00000013352	Vars	78	87.699	ENSAMEG00000006417	VARS	92	87.699	Ailuropoda_melanoleuca
ENSCGRG00000013352	Vars	78	63.651	ENSACIG00000013752	vars	93	63.311	Amphilophus_citrinellus
ENSCGRG00000013352	Vars	78	63.114	ENSAOCG00000002447	vars	93	62.781	Amphiprion_ocellaris
ENSCGRG00000013352	Vars	78	63.002	ENSAPEG00000010638	vars	92	62.932	Amphiprion_percula
ENSCGRG00000013352	Vars	78	62.573	ENSATEG00000020219	vars	93	62.239	Anabas_testudineus
ENSCGRG00000013352	Vars	69	67.745	ENSACAG00000029133	-	92	68.052	Anolis_carolinensis
ENSCGRG00000013352	Vars	78	87.605	ENSANAG00000015453	VARS	92	87.605	Aotus_nancymaae
ENSCGRG00000013352	Vars	78	62.377	ENSACLG00000025699	vars	90	62.038	Astatotilapia_calliptera
ENSCGRG00000013352	Vars	73	64.330	ENSAMXG00000017716	vars	87	64.330	Astyanax_mexicanus
ENSCGRG00000013352	Vars	78	87.521	ENSBTAG00000005631	VARS	92	87.521	Bos_taurus
ENSCGRG00000013352	Vars	78	87.940	ENSCJAG00000002604	VARS	92	87.940	Callithrix_jacchus
ENSCGRG00000013352	Vars	78	87.270	ENSCAFG00000000636	VARS	92	87.270	Canis_familiaris
ENSCGRG00000013352	Vars	73	87.253	ENSCAFG00020020790	VARS	88	87.253	Canis_lupus_dingo
ENSCGRG00000013352	Vars	78	87.940	ENSCHIG00000011008	VARS	92	87.940	Capra_hircus
ENSCGRG00000013352	Vars	78	88.442	ENSTSYG00000001567	VARS	92	88.442	Carlito_syrichta
ENSCGRG00000013352	Vars	76	86.403	ENSCAPG00000013736	VARS	99	85.076	Cavia_aperea
ENSCGRG00000013352	Vars	78	86.348	ENSCPOG00000000870	VARS	92	86.348	Cavia_porcellus
ENSCGRG00000013352	Vars	78	87.605	ENSCCAG00000035656	VARS	100	93.284	Cebus_capucinus
ENSCGRG00000013352	Vars	78	87.688	ENSCATG00000022394	VARS	100	90.172	Cercocebus_atys
ENSCGRG00000013352	Vars	76	82.862	ENSCLAG00000009470	VARS	95	82.862	Chinchilla_lanigera
ENSCGRG00000013352	Vars	78	88.191	ENSCSAG00000008784	VARS	92	88.191	Chlorocebus_sabaeus
ENSCGRG00000013352	Vars	65	68.924	ENSCPBG00000007943	VARS	96	68.924	Chrysemys_picta_bellii
ENSCGRG00000013352	Vars	78	88.107	ENSCANG00000033570	VARS	92	88.107	Colobus_angolensis_palliatus
ENSCGRG00000013352	Vars	78	95.394	ENSCGRG00001005686	Vars	92	95.394	Cricetulus_griseus_chok1gshd
ENSCGRG00000013352	Vars	78	62.929	ENSCSEG00000019652	vars	93	62.762	Cynoglossus_semilaevis
ENSCGRG00000013352	Vars	78	63.517	ENSCVAG00000022398	vars	93	63.435	Cyprinodon_variegatus
ENSCGRG00000013352	Vars	78	63.361	ENSDARG00000044575	vars	93	63.240	Danio_rerio
ENSCGRG00000013352	Vars	71	87.100	ENSDORG00000016433	Vars	95	87.100	Dipodomys_ordii
ENSCGRG00000013352	Vars	59	84.211	ENSETEG00000003824	VARS	75	84.663	Echinops_telfairi
ENSCGRG00000013352	Vars	51	60.158	ENSEBUG00000004637	vars	100	60.422	Eptatretus_burgeri
ENSCGRG00000013352	Vars	78	88.526	ENSEASG00005015673	VARS	92	88.526	Equus_asinus_asinus
ENSCGRG00000013352	Vars	78	87.699	ENSECAG00000014620	VARS	92	88.033	Equus_caballus
ENSCGRG00000013352	Vars	62	90.657	ENSEEUG00000004116	VARS	74	90.657	Erinaceus_europaeus
ENSCGRG00000013352	Vars	78	62.735	ENSELUG00000006550	vars	91	62.654	Esox_lucius
ENSCGRG00000013352	Vars	78	87.521	ENSFCAG00000004510	VARS	92	87.521	Felis_catus
ENSCGRG00000013352	Vars	71	83.685	ENSFDAG00000011401	VARS	99	83.685	Fukomys_damarensis
ENSCGRG00000013352	Vars	78	63.846	ENSFHEG00000010672	vars	93	63.681	Fundulus_heteroclitus
ENSCGRG00000013352	Vars	78	62.286	ENSGMOG00000014908	vars	97	62.367	Gadus_morhua
ENSCGRG00000013352	Vars	78	63.539	ENSGAFG00000021630	vars	93	63.457	Gambusia_affinis
ENSCGRG00000013352	Vars	78	62.193	ENSGACG00000009601	vars	97	62.120	Gasterosteus_aculeatus
ENSCGRG00000013352	Vars	78	87.940	ENSGGOG00000011364	VARS	92	87.940	Gorilla_gorilla
ENSCGRG00000013352	Vars	78	62.377	ENSHBUG00000017151	vars	90	62.038	Haplochromis_burtoni
ENSCGRG00000013352	Vars	78	85.343	ENSHGLG00000011646	VARS	92	84.673	Heterocephalus_glaber_female
ENSCGRG00000013352	Vars	78	77.851	ENSHGLG00100018062	VARS	99	77.851	Heterocephalus_glaber_male
ENSCGRG00000013352	Vars	78	62.377	ENSHCOG00000012198	vars	93	62.490	Hippocampus_comes
ENSCGRG00000013352	Vars	78	63.704	ENSIPUG00000005218	vars	93	63.704	Ictalurus_punctatus
ENSCGRG00000013352	Vars	78	88.703	ENSSTOG00000013112	VARS	92	88.703	Ictidomys_tridecemlineatus
ENSCGRG00000013352	Vars	78	86.600	ENSJJAG00000019749	-	92	85.846	Jaculus_jaculus
ENSCGRG00000013352	Vars	78	71.249	ENSJJAG00000015343	-	95	70.578	Jaculus_jaculus
ENSCGRG00000013352	Vars	78	63.545	ENSKMAG00000009455	vars	93	63.043	Kryptolebias_marmoratus
ENSCGRG00000013352	Vars	78	63.462	ENSLBEG00000010341	vars	93	63.211	Labrus_bergylta
ENSCGRG00000013352	Vars	73	60.593	ENSLACG00000015232	VARS	92	61.029	Latimeria_chalumnae
ENSCGRG00000013352	Vars	78	65.397	ENSLOCG00000004240	vars	93	65.232	Lepisosteus_oculatus
ENSCGRG00000013352	Vars	78	86.432	ENSLAFG00000023090	VARS	92	85.930	Loxodonta_africana
ENSCGRG00000013352	Vars	78	88.107	ENSMFAG00000001032	VARS	92	88.107	Macaca_fascicularis
ENSCGRG00000013352	Vars	78	88.107	ENSMMUG00000006828	VARS	92	88.107	Macaca_mulatta
ENSCGRG00000013352	Vars	78	88.107	ENSMNEG00000042072	VARS	92	88.107	Macaca_nemestrina
ENSCGRG00000013352	Vars	78	87.856	ENSMLEG00000039307	VARS	92	87.856	Mandrillus_leucophaeus
ENSCGRG00000013352	Vars	78	62.833	ENSMAMG00000003949	vars	93	62.667	Mastacembelus_armatus
ENSCGRG00000013352	Vars	78	62.377	ENSMZEG00005018327	vars	92	61.738	Maylandia_zebra
ENSCGRG00000013352	Vars	78	91.541	ENSMAUG00000006715	Vars	92	91.541	Mesocricetus_auratus
ENSCGRG00000013352	Vars	78	86.935	ENSMICG00000003548	VARS	100	93.035	Microcebus_murinus
ENSCGRG00000013352	Vars	78	87.688	ENSMOCG00000015404	Vars	92	87.353	Microtus_ochrogaster
ENSCGRG00000013352	Vars	78	62.458	ENSMMOG00000015801	vars	93	62.209	Mola_mola
ENSCGRG00000013352	Vars	78	80.737	ENSMODG00000015204	-	92	80.737	Monodelphis_domestica
ENSCGRG00000013352	Vars	78	62.552	ENSMALG00000022532	vars	93	62.302	Monopterus_albus
ENSCGRG00000013352	Vars	78	89.698	MGP_CAROLIEiJ_G0021491	Vars	92	89.280	Mus_caroli
ENSCGRG00000013352	Vars	78	89.866	ENSMUSG00000007029	Vars	92	89.447	Mus_musculus
ENSCGRG00000013352	Vars	78	89.950	MGP_PahariEiJ_G0020486	Vars	92	89.112	Mus_pahari
ENSCGRG00000013352	Vars	78	89.950	MGP_SPRETEiJ_G0022396	Vars	92	89.531	Mus_spretus
ENSCGRG00000013352	Vars	78	87.940	ENSMPUG00000010821	VARS	92	87.940	Mustela_putorius_furo
ENSCGRG00000013352	Vars	59	85.185	ENSMLUG00000013126	VARS	90	85.621	Myotis_lucifugus
ENSCGRG00000013352	Vars	78	88.526	ENSNGAG00000012151	Vars	92	88.861	Nannospalax_galili
ENSCGRG00000013352	Vars	78	62.213	ENSNBRG00000020520	vars	93	61.873	Neolamprologus_brichardi
ENSCGRG00000013352	Vars	78	87.270	ENSNLEG00000006351	VARS	100	88.592	Nomascus_leucogenys
ENSCGRG00000013352	Vars	78	77.219	ENSMEUG00000011378	VARS	92	77.219	Notamacropus_eugenii
ENSCGRG00000013352	Vars	78	88.610	ENSOPRG00000003607	VARS	92	88.610	Ochotona_princeps
ENSCGRG00000013352	Vars	78	86.013	ENSODEG00000017681	VARS	92	85.427	Octodon_degus
ENSCGRG00000013352	Vars	78	63.110	ENSONIG00000013064	vars	99	63.069	Oreochromis_niloticus
ENSCGRG00000013352	Vars	59	75.357	ENSOANG00000005400	VARS	91	74.578	Ornithorhynchus_anatinus
ENSCGRG00000013352	Vars	78	85.343	ENSOCUG00000022463	VARS	92	85.343	Oryctolagus_cuniculus
ENSCGRG00000013352	Vars	78	63.119	ENSORLG00000013063	vars	93	63.051	Oryzias_latipes
ENSCGRG00000013352	Vars	78	63.770	ENSORLG00020003504	vars	93	63.607	Oryzias_latipes_hni
ENSCGRG00000013352	Vars	78	63.577	ENSORLG00015009001	vars	93	63.495	Oryzias_latipes_hsok
ENSCGRG00000013352	Vars	78	62.969	ENSOMEG00000015016	vars	93	62.887	Oryzias_melastigma
ENSCGRG00000013352	Vars	78	87.186	ENSOGAG00000007515	VARS	92	87.186	Otolemur_garnettii
ENSCGRG00000013352	Vars	78	88.191	ENSPPAG00000034012	VARS	92	88.191	Pan_paniscus
ENSCGRG00000013352	Vars	78	87.688	ENSPPRG00000014855	VARS	92	87.688	Panthera_pardus
ENSCGRG00000013352	Vars	71	87.671	ENSPTIG00000010462	VARS	93	87.659	Panthera_tigris_altaica
ENSCGRG00000013352	Vars	78	88.275	ENSPTRG00000017985	VARS	92	88.275	Pan_troglodytes
ENSCGRG00000013352	Vars	78	86.394	ENSPANG00000014565	VARS	92	86.394	Papio_anubis
ENSCGRG00000013352	Vars	78	61.633	ENSPKIG00000016304	vars	93	61.388	Paramormyrops_kingsleyae
ENSCGRG00000013352	Vars	78	64.387	ENSPMGG00000023909	vars	93	64.220	Periophthalmus_magnuspinnatus
ENSCGRG00000013352	Vars	78	91.541	ENSPEMG00000006639	Vars	92	91.541	Peromyscus_maniculatus_bairdii
ENSCGRG00000013352	Vars	78	80.402	ENSPCIG00000018553	VARS	92	80.402	Phascolarctos_cinereus
ENSCGRG00000013352	Vars	78	63.621	ENSPFOG00000015690	vars	93	63.539	Poecilia_formosa
ENSCGRG00000013352	Vars	78	64.030	ENSPLAG00000009590	vars	93	63.697	Poecilia_latipinna
ENSCGRG00000013352	Vars	78	63.621	ENSPMEG00000004708	vars	93	63.539	Poecilia_mexicana
ENSCGRG00000013352	Vars	78	62.083	ENSPREG00000013264	vars	92	61.194	Poecilia_reticulata
ENSCGRG00000013352	Vars	78	86.181	ENSPPYG00000016460	VARS	92	86.181	Pongo_abelii
ENSCGRG00000013352	Vars	66	86.201	ENSPCAG00000013565	VARS	78	86.201	Procavia_capensis
ENSCGRG00000013352	Vars	78	87.113	ENSPCOG00000010942	VARS	92	87.448	Propithecus_coquereli
ENSCGRG00000013352	Vars	78	83.668	ENSPVAG00000012403	VARS	92	83.668	Pteropus_vampyrus
ENSCGRG00000013352	Vars	78	62.377	ENSPNYG00000022511	vars	93	62.038	Pundamilia_nyererei
ENSCGRG00000013352	Vars	78	63.547	ENSPNAG00000020962	vars	93	63.300	Pygocentrus_nattereri
ENSCGRG00000013352	Vars	78	90.369	ENSRNOG00000000867	Vars	92	90.369	Rattus_norvegicus
ENSCGRG00000013352	Vars	78	88.023	ENSRBIG00000041669	VARS	100	90.663	Rhinopithecus_bieti
ENSCGRG00000013352	Vars	78	88.023	ENSRROG00000045490	VARS	92	88.023	Rhinopithecus_roxellana
ENSCGRG00000013352	Vars	78	87.521	ENSSBOG00000035402	VARS	92	87.521	Saimiri_boliviensis_boliviensis
ENSCGRG00000013352	Vars	77	78.704	ENSSHAG00000006937	VARS	91	78.704	Sarcophilus_harrisii
ENSCGRG00000013352	Vars	78	62.939	ENSSFOG00015014272	vars	93	62.694	Scleropages_formosus
ENSCGRG00000013352	Vars	78	61.866	ENSSMAG00000009596	vars	93	61.526	Scophthalmus_maximus
ENSCGRG00000013352	Vars	78	62.602	ENSSDUG00000014177	vars	93	62.264	Seriola_dumerili
ENSCGRG00000013352	Vars	78	62.520	ENSSLDG00000025316	vars	93	62.182	Seriola_lalandi_dorsalis
ENSCGRG00000013352	Vars	78	63.517	ENSSPAG00000017068	vars	93	63.262	Stegastes_partitus
ENSCGRG00000013352	Vars	78	86.360	ENSSSCG00000038950	VARS	92	86.695	Sus_scrofa
ENSCGRG00000013352	Vars	62	62.708	ENSTRUG00000012307	vars	89	62.027	Takifugu_rubripes
ENSCGRG00000013352	Vars	78	63.132	ENSTNIG00000008011	vars	97	62.305	Tetraodon_nigroviridis
ENSCGRG00000013352	Vars	78	78.392	ENSTTRG00000014128	VARS	92	78.392	Tursiops_truncatus
ENSCGRG00000013352	Vars	78	83.943	ENSUAMG00000010424	VARS	92	83.943	Ursus_americanus
ENSCGRG00000013352	Vars	72	85.283	ENSUMAG00000013486	VARS	89	84.717	Ursus_maritimus
ENSCGRG00000013352	Vars	78	86.862	ENSVVUG00000021323	VARS	92	86.611	Vulpes_vulpes
ENSCGRG00000013352	Vars	78	61.107	ENSXETG00000024076	vars	93	60.380	Xenopus_tropicalis
ENSCGRG00000013352	Vars	78	63.500	ENSXCOG00000019172	vars	93	63.417	Xiphophorus_couchianus
ENSCGRG00000013352	Vars	78	63.374	ENSXMAG00000010927	vars	93	63.292	Xiphophorus_maculatus