EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000014197 (Gene tree)
Gene ID: -
Gene Symbol: Pum1
Alias: Pumm
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 108645 bases
Position: chrJH000110.1:585125-693769
Accession: 100765502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000019497	PUF	PF00806.19	2e-70	1	8
ENSCGRP00000019497	PUF	PF00806.19	2e-70	2	8
ENSCGRP00000019497	PUF	PF00806.19	2e-70	3	8
ENSCGRP00000019497	PUF	PF00806.19	2e-70	4	8
ENSCGRP00000019497	PUF	PF00806.19	2e-70	5	8
ENSCGRP00000019497	PUF	PF00806.19	2e-70	6	8
ENSCGRP00000019497	PUF	PF00806.19	2e-70	7	8
ENSCGRP00000019497	PUF	PF00806.19	2e-70	8	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	1	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	2	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	3	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	4	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	5	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	6	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	7	8
ENSCGRP00000019498	PUF	PF00806.19	1.2e-69	8	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	1	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	2	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	3	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	4	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	5	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	6	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	7	8
ENSCGRP00000019495	PUF	PF00806.19	1.5e-69	8	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	1	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	2	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	3	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	4	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	5	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	6	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	7	8
ENSCGRP00000019496	PUF	PF00806.19	1.7e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000019772	-	6198	XM_003498359	ENSCGRP00000019495	1185 (aa)	XP_003498407	UPI00022F3A10
ENSCGRT00000019773	-	4968	XM_003498360	ENSCGRP00000019496	1091 (aa)	XP_003498408	UPI00022F3A11
ENSCGRT00000019774	-	4524	XM_016970410	ENSCGRP00000019497	943 (aa)	XP_016825899	UPI00022F3A12
ENSCGRT00000019775	-	6064	-	ENSCGRP00000019498	1151 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000014197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000014197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000014197	Pum1	86	87.059	ENSCGRG00000001580	Pum2	100	88.592

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000014197	Pum1	100	99.306	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSCGRG00000014197	Pum1	100	82.942	ENSAPOG00000021632	pum1	100	90.799	Acanthochromis_polyacanthus
ENSCGRG00000014197	Pum1	100	99.306	ENSAMEG00000017656	PUM1	97	98.487	Ailuropoda_melanoleuca
ENSCGRG00000014197	Pum1	100	82.942	ENSACIG00000021013	pum1	100	75.642	Amphilophus_citrinellus
ENSCGRG00000014197	Pum1	100	82.942	ENSAOCG00000003944	pum1	100	77.326	Amphiprion_ocellaris
ENSCGRG00000014197	Pum1	100	82.942	ENSAPEG00000014550	pum1	100	77.326	Amphiprion_percula
ENSCGRG00000014197	Pum1	100	82.942	ENSATEG00000016004	pum1	100	90.799	Anabas_testudineus
ENSCGRG00000014197	Pum1	100	97.139	ENSAPLG00000009351	PUM1	100	96.804	Anas_platyrhynchos
ENSCGRG00000014197	Pum1	100	95.885	ENSACAG00000000682	PUM1	98	95.198	Anolis_carolinensis
ENSCGRG00000014197	Pum1	100	99.306	ENSANAG00000027865	PUM1	100	99.306	Aotus_nancymaae
ENSCGRG00000014197	Pum1	90	77.778	ENSACLG00000019354	pum1	100	77.963	Astatotilapia_calliptera
ENSCGRG00000014197	Pum1	100	83.478	ENSAMXG00000020607	pum1	96	78.661	Astyanax_mexicanus
ENSCGRG00000014197	Pum1	100	99.306	ENSBTAG00000018979	PUM1	100	99.306	Bos_taurus
ENSCGRG00000014197	Pum1	100	99.306	ENSCJAG00000006035	PUM1	100	99.306	Callithrix_jacchus
ENSCGRG00000014197	Pum1	100	99.306	ENSCAFG00000011205	PUM1	100	96.299	Canis_familiaris
ENSCGRG00000014197	Pum1	92	96.451	ENSCAFG00020024616	PUM1	99	97.818	Canis_lupus_dingo
ENSCGRG00000014197	Pum1	100	99.306	ENSCHIG00000012952	PUM1	100	98.904	Capra_hircus
ENSCGRG00000014197	Pum1	100	98.611	ENSTSYG00000008868	PUM1	100	98.611	Carlito_syrichta
ENSCGRG00000014197	Pum1	100	98.810	ENSCPOG00000031613	PUM1	100	98.810	Cavia_porcellus
ENSCGRG00000014197	Pum1	100	99.306	ENSCATG00000017991	PUM1	100	99.306	Cercocebus_atys
ENSCGRG00000014197	Pum1	100	98.901	ENSCLAG00000007662	PUM1	100	99.515	Chinchilla_lanigera
ENSCGRG00000014197	Pum1	100	99.306	ENSCSAG00000001028	PUM1	100	97.833	Chlorocebus_sabaeus
ENSCGRG00000014197	Pum1	92	99.306	ENSCHOG00000010245	PUM1	93	95.827	Choloepus_hoffmanni
ENSCGRG00000014197	Pum1	100	97.070	ENSCPBG00000009288	PUM1	100	97.573	Chrysemys_picta_bellii
ENSCGRG00000014197	Pum1	100	99.306	ENSCANG00000042606	PUM1	100	99.306	Colobus_angolensis_palliatus
ENSCGRG00000014197	Pum1	100	100.000	ENSCGRG00001024949	Pum1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000014197	Pum1	90	75.974	ENSCSEG00000015981	pum1	100	77.365	Cynoglossus_semilaevis
ENSCGRG00000014197	Pum1	100	82.447	ENSCVAG00000007043	pum1	100	74.855	Cyprinodon_variegatus
ENSCGRG00000014197	Pum1	100	84.596	ENSDARG00000099256	pum1	100	79.331	Danio_rerio
ENSCGRG00000014197	Pum1	100	99.306	ENSDNOG00000010939	PUM1	100	98.150	Dasypus_novemcinctus
ENSCGRG00000014197	Pum1	85	99.515	ENSDORG00000001875	Pum1	100	99.515	Dipodomys_ordii
ENSCGRG00000014197	Pum1	85	100.000	ENSETEG00000004355	PUM1	87	93.262	Echinops_telfairi
ENSCGRG00000014197	Pum1	100	99.306	ENSEASG00005010813	PUM1	100	98.401	Equus_asinus_asinus
ENSCGRG00000014197	Pum1	100	98.611	ENSECAG00000021369	PUM1	100	98.234	Equus_caballus
ENSCGRG00000014197	Pum1	80	99.306	ENSEEUG00000003871	PUM1	74	99.322	Erinaceus_europaeus
ENSCGRG00000014197	Pum1	100	82.966	ENSELUG00000002409	pum1	100	83.354	Esox_lucius
ENSCGRG00000014197	Pum1	100	99.306	ENSFCAG00000010374	PUM1	100	99.306	Felis_catus
ENSCGRG00000014197	Pum1	100	96.044	ENSFALG00000001214	PUM1	97	94.054	Ficedula_albicollis
ENSCGRG00000014197	Pum1	100	98.810	ENSFDAG00000011319	PUM1	100	98.810	Fukomys_damarensis
ENSCGRG00000014197	Pum1	70	88.023	ENSGMOG00000010491	pum1	100	74.319	Gadus_morhua
ENSCGRG00000014197	Pum1	100	97.264	ENSGALG00000042598	PUM1	100	97.164	Gallus_gallus
ENSCGRG00000014197	Pum1	100	80.569	ENSGAFG00000015617	pum1	100	90.073	Gambusia_affinis
ENSCGRG00000014197	Pum1	100	82.411	ENSGACG00000005717	pum1	100	75.433	Gasterosteus_aculeatus
ENSCGRG00000014197	Pum1	100	96.766	ENSGAGG00000001290	PUM1	100	96.552	Gopherus_agassizii
ENSCGRG00000014197	Pum1	100	99.306	ENSGGOG00000011983	PUM1	100	99.306	Gorilla_gorilla
ENSCGRG00000014197	Pum1	100	82.695	ENSHBUG00000018718	pum1	100	75.434	Haplochromis_burtoni
ENSCGRG00000014197	Pum1	100	98.626	ENSHGLG00000013819	Pum1	100	98.626	Heterocephalus_glaber_female
ENSCGRG00000014197	Pum1	100	98.626	ENSHGLG00100008621	Pum1	100	98.626	Heterocephalus_glaber_male
ENSCGRG00000014197	Pum1	90	74.977	ENSHCOG00000005149	pum1	100	75.093	Hippocampus_comes
ENSCGRG00000014197	Pum1	100	82.244	ENSIPUG00000020421	pum1	100	77.621	Ictalurus_punctatus
ENSCGRG00000014197	Pum1	100	99.306	ENSSTOG00000010757	PUM1	100	99.306	Ictidomys_tridecemlineatus
ENSCGRG00000014197	Pum1	100	99.306	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSCGRG00000014197	Pum1	100	82.077	ENSKMAG00000003481	pum1	100	75.021	Kryptolebias_marmoratus
ENSCGRG00000014197	Pum1	100	81.683	ENSLBEG00000002527	pum1	100	75.559	Labrus_bergylta
ENSCGRG00000014197	Pum1	100	88.104	ENSLACG00000017188	PUM1	99	86.012	Latimeria_chalumnae
ENSCGRG00000014197	Pum1	100	91.418	ENSLOCG00000005210	pum1	99	87.886	Lepisosteus_oculatus
ENSCGRG00000014197	Pum1	100	97.897	ENSLAFG00000003178	PUM1	100	97.897	Loxodonta_africana
ENSCGRG00000014197	Pum1	100	99.306	ENSMFAG00000010291	PUM1	100	99.306	Macaca_fascicularis
ENSCGRG00000014197	Pum1	100	99.306	ENSMMUG00000013520	PUM1	100	99.306	Macaca_mulatta
ENSCGRG00000014197	Pum1	100	99.306	ENSMNEG00000034639	PUM1	100	99.306	Macaca_nemestrina
ENSCGRG00000014197	Pum1	100	99.306	ENSMLEG00000038743	PUM1	100	99.306	Mandrillus_leucophaeus
ENSCGRG00000014197	Pum1	100	82.695	ENSMAMG00000011606	pum1	100	75.517	Mastacembelus_armatus
ENSCGRG00000014197	Pum1	100	82.695	ENSMZEG00005005834	pum1	100	75.434	Maylandia_zebra
ENSCGRG00000014197	Pum1	100	96.891	ENSMGAG00000000724	PUM1	100	96.889	Meleagris_gallopavo
ENSCGRG00000014197	Pum1	100	100.000	ENSMAUG00000022090	Pum1	100	100.000	Mesocricetus_auratus
ENSCGRG00000014197	Pum1	99	97.183	ENSMICG00000012213	-	99	96.709	Microcebus_murinus
ENSCGRG00000014197	Pum1	100	98.810	ENSMICG00000007713	-	100	98.810	Microcebus_murinus
ENSCGRG00000014197	Pum1	100	99.542	ENSMOCG00000015463	Pum1	100	99.542	Microtus_ochrogaster
ENSCGRG00000014197	Pum1	90	87.991	ENSMMOG00000019817	pum1	100	90.557	Mola_mola
ENSCGRG00000014197	Pum1	100	97.275	ENSMODG00000017067	PUM1	100	97.143	Monodelphis_domestica
ENSCGRG00000014197	Pum1	90	88.222	ENSMALG00000016399	pum1	100	90.799	Monopterus_albus
ENSCGRG00000014197	Pum1	100	99.306	MGP_CAROLIEiJ_G0026549	Pum1	100	99.306	Mus_caroli
ENSCGRG00000014197	Pum1	100	100.000	ENSMUSG00000028580	Pum1	100	100.000	Mus_musculus
ENSCGRG00000014197	Pum1	100	100.000	MGP_PahariEiJ_G0028881	Pum1	100	100.000	Mus_pahari
ENSCGRG00000014197	Pum1	100	100.000	MGP_SPRETEiJ_G0027529	Pum1	100	100.000	Mus_spretus
ENSCGRG00000014197	Pum1	100	99.306	ENSMPUG00000015454	PUM1	100	98.316	Mustela_putorius_furo
ENSCGRG00000014197	Pum1	100	99.306	ENSMLUG00000006490	PUM1	100	98.484	Myotis_lucifugus
ENSCGRG00000014197	Pum1	100	99.047	ENSNGAG00000002378	Pum1	100	99.126	Nannospalax_galili
ENSCGRG00000014197	Pum1	100	79.833	ENSNBRG00000010689	pum1	100	83.395	Neolamprologus_brichardi
ENSCGRG00000014197	Pum1	100	98.611	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSCGRG00000014197	Pum1	84	96.284	ENSMEUG00000000976	-	82	96.284	Notamacropus_eugenii
ENSCGRG00000014197	Pum1	84	100.000	ENSOPRG00000001776	PUM1	72	100.000	Ochotona_princeps
ENSCGRG00000014197	Pum1	100	98.718	ENSODEG00000003465	PUM1	100	98.718	Octodon_degus
ENSCGRG00000014197	Pum1	100	83.231	ENSONIG00000002290	pum1	100	75.765	Oreochromis_niloticus
ENSCGRG00000014197	Pum1	81	77.152	ENSOANG00000004902	-	100	77.152	Ornithorhynchus_anatinus
ENSCGRG00000014197	Pum1	100	99.306	ENSOCUG00000008641	PUM1	99	98.736	Oryctolagus_cuniculus
ENSCGRG00000014197	Pum1	100	83.560	ENSORLG00000011482	pum1	100	75.763	Oryzias_latipes
ENSCGRG00000014197	Pum1	100	83.560	ENSORLG00020019461	pum1	100	75.763	Oryzias_latipes_hni
ENSCGRG00000014197	Pum1	100	83.684	ENSORLG00015011375	pum1	100	75.845	Oryzias_latipes_hsok
ENSCGRG00000014197	Pum1	90	92.494	ENSOMEG00000009312	pum1	100	76.744	Oryzias_melastigma
ENSCGRG00000014197	Pum1	100	98.611	ENSOGAG00000011063	PUM1	100	95.298	Otolemur_garnettii
ENSCGRG00000014197	Pum1	100	99.306	ENSOARG00000001899	PUM1	100	98.786	Ovis_aries
ENSCGRG00000014197	Pum1	100	99.306	ENSPPAG00000044003	PUM1	100	99.306	Pan_paniscus
ENSCGRG00000014197	Pum1	100	99.306	ENSPPRG00000001370	PUM1	100	99.306	Panthera_pardus
ENSCGRG00000014197	Pum1	100	99.306	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSCGRG00000014197	Pum1	100	99.306	ENSPTRG00000000453	PUM1	100	99.306	Pan_troglodytes
ENSCGRG00000014197	Pum1	100	99.306	ENSPANG00000016338	PUM1	100	99.306	Papio_anubis
ENSCGRG00000014197	Pum1	100	82.353	ENSPKIG00000010578	pum1	100	77.704	Paramormyrops_kingsleyae
ENSCGRG00000014197	Pum1	100	97.272	ENSPSIG00000014118	PUM1	100	97.138	Pelodiscus_sinensis
ENSCGRG00000014197	Pum1	100	78.193	ENSPMGG00000005836	pum1	100	81.840	Periophthalmus_magnuspinnatus
ENSCGRG00000014197	Pum1	100	100.000	ENSPEMG00000010009	Pum1	100	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00000014197	Pum1	100	97.379	ENSPCIG00000014151	PUM1	100	97.388	Phascolarctos_cinereus
ENSCGRG00000014197	Pum1	93	83.477	ENSPFOG00000007289	pum1	99	82.083	Poecilia_formosa
ENSCGRG00000014197	Pum1	100	82.571	ENSPLAG00000007256	pum1	100	77.801	Poecilia_latipinna
ENSCGRG00000014197	Pum1	85	82.695	ENSPMEG00000019543	pum1	99	77.993	Poecilia_mexicana
ENSCGRG00000014197	Pum1	100	82.571	ENSPREG00000005195	pum1	100	80.900	Poecilia_reticulata
ENSCGRG00000014197	Pum1	100	99.306	ENSPPYG00000001621	PUM1	100	96.865	Pongo_abelii
ENSCGRG00000014197	Pum1	84	98.765	ENSPCAG00000001979	PUM1	74	98.765	Procavia_capensis
ENSCGRG00000014197	Pum1	100	98.810	ENSPCOG00000004398	PUM1	100	98.810	Propithecus_coquereli
ENSCGRG00000014197	Pum1	100	99.306	ENSPVAG00000005207	PUM1	97	96.465	Pteropus_vampyrus
ENSCGRG00000014197	Pum1	100	82.695	ENSPNYG00000009518	pum1	100	81.356	Pundamilia_nyererei
ENSCGRG00000014197	Pum1	100	84.224	ENSPNAG00000026728	pum1	100	80.042	Pygocentrus_nattereri
ENSCGRG00000014197	Pum1	100	100.000	ENSRNOG00000011709	Pum1	100	99.325	Rattus_norvegicus
ENSCGRG00000014197	Pum1	100	99.306	ENSRBIG00000042521	PUM1	100	99.306	Rhinopithecus_bieti
ENSCGRG00000014197	Pum1	100	99.306	ENSRROG00000020156	PUM1	100	99.306	Rhinopithecus_roxellana
ENSCGRG00000014197	Pum1	100	99.306	ENSSBOG00000032037	PUM1	100	99.306	Saimiri_boliviensis_boliviensis
ENSCGRG00000014197	Pum1	100	97.170	ENSSHAG00000010918	PUM1	100	96.975	Sarcophilus_harrisii
ENSCGRG00000014197	Pum1	100	82.447	ENSSMAG00000010918	pum1	100	90.799	Scophthalmus_maximus
ENSCGRG00000014197	Pum1	100	82.818	ENSSDUG00000009021	pum1	100	76.344	Seriola_dumerili
ENSCGRG00000014197	Pum1	100	82.818	ENSSLDG00000009667	pum1	100	78.320	Seriola_lalandi_dorsalis
ENSCGRG00000014197	Pum1	99	99.306	ENSSARG00000003055	PUM1	91	99.115	Sorex_araneus
ENSCGRG00000014197	Pum1	100	97.011	ENSSPUG00000006267	PUM1	100	96.380	Sphenodon_punctatus
ENSCGRG00000014197	Pum1	100	82.942	ENSSPAG00000016636	pum1	100	77.326	Stegastes_partitus
ENSCGRG00000014197	Pum1	100	99.306	ENSSSCG00000003591	PUM1	100	99.167	Sus_scrofa
ENSCGRG00000014197	Pum1	100	82.324	ENSTRUG00000013121	pum1	100	83.024	Takifugu_rubripes
ENSCGRG00000014197	Pum1	100	80.470	ENSTNIG00000016983	pum1	99	76.412	Tetraodon_nigroviridis
ENSCGRG00000014197	Pum1	87	96.341	ENSTBEG00000013810	PUM1	88	96.341	Tupaia_belangeri
ENSCGRG00000014197	Pum1	92	98.540	ENSTTRG00000007436	PUM1	90	98.540	Tursiops_truncatus
ENSCGRG00000014197	Pum1	99	98.521	ENSUAMG00000018262	-	100	98.521	Ursus_americanus
ENSCGRG00000014197	Pum1	95	98.792	ENSUMAG00000009211	PUM1	100	98.792	Ursus_maritimus
ENSCGRG00000014197	Pum1	100	98.611	ENSVPAG00000005902	PUM1	92	98.983	Vicugna_pacos
ENSCGRG00000014197	Pum1	100	99.306	ENSVVUG00000014631	PUM1	100	98.785	Vulpes_vulpes
ENSCGRG00000014197	Pum1	100	88.075	ENSXETG00000012904	pum1	99	86.062	Xenopus_tropicalis
ENSCGRG00000014197	Pum1	100	80.569	ENSXMAG00000002945	pum1	100	76.867	Xiphophorus_maculatus