EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000015138 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 16157 bases
Position: chrJH000173.1:1142863-1159019
Accession: 100760971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000020830	RRM_1	PF00076.22	3.8e-29	1	3
ENSCGRP00000020830	RRM_1	PF00076.22	3.8e-29	2	3
ENSCGRP00000020830	RRM_1	PF00076.22	3.8e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000021128	-	4297	XM_003499740	ENSCGRP00000020830	742 (aa)	XP_003499788	UPI00022F3DF3

Gene Model

Click here to download ENSCGRG00000015138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000015138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000015138	-	100	89.488	ENSG00000161847	RAVER1	100	88.949	Homo_sapiens
ENSCGRG00000015138	-	100	89.218	ENSAMEG00000011738	RAVER1	98	89.218	Ailuropoda_melanoleuca
ENSCGRG00000015138	-	78	62.338	ENSAPEG00000010854	raver1	83	62.338	Amphiprion_percula
ENSCGRG00000015138	-	97	50.204	ENSATEG00000021004	raver1	91	49.254	Anabas_testudineus
ENSCGRG00000015138	-	84	58.742	ENSACAG00000008386	-	91	59.366	Anolis_carolinensis
ENSCGRG00000015138	-	100	89.218	ENSANAG00000028226	RAVER1	98	89.353	Aotus_nancymaae
ENSCGRG00000015138	-	74	87.500	ENSACLG00000018492	raver1	76	87.500	Astatotilapia_calliptera
ENSCGRG00000015138	-	79	80.000	ENSAMXG00000005132	raver1	81	75.000	Astyanax_mexicanus
ENSCGRG00000015138	-	100	88.140	ENSBTAG00000015721	RAVER1	97	92.750	Bos_taurus
ENSCGRG00000015138	-	100	89.218	ENSCJAG00000005671	RAVER1	98	89.353	Callithrix_jacchus
ENSCGRG00000015138	-	100	88.410	ENSCAFG00000017861	RAVER1	98	88.814	Canis_familiaris
ENSCGRG00000015138	-	100	88.410	ENSCAFG00020024449	RAVER1	100	88.814	Canis_lupus_dingo
ENSCGRG00000015138	-	100	87.466	ENSCHIG00000006718	RAVER1	100	87.736	Capra_hircus
ENSCGRG00000015138	-	91	84.071	ENSTSYG00000027107	RAVER1	100	83.776	Carlito_syrichta
ENSCGRG00000015138	-	90	88.042	ENSCAPG00000002269	RAVER1	100	88.640	Cavia_aperea
ENSCGRG00000015138	-	100	90.027	ENSCPOG00000001008	RAVER1	100	90.701	Cavia_porcellus
ENSCGRG00000015138	-	100	89.623	ENSCCAG00000031723	RAVER1	98	89.084	Cebus_capucinus
ENSCGRG00000015138	-	100	90.162	ENSCATG00000043863	RAVER1	98	89.623	Cercocebus_atys
ENSCGRG00000015138	-	100	90.983	ENSCLAG00000009336	RAVER1	100	90.579	Chinchilla_lanigera
ENSCGRG00000015138	-	100	90.296	ENSCSAG00000007317	RAVER1	84	89.757	Chlorocebus_sabaeus
ENSCGRG00000015138	-	96	62.003	ENSCPBG00000005349	-	96	61.183	Chrysemys_picta_bellii
ENSCGRG00000015138	-	100	90.431	ENSCANG00000008337	RAVER1	98	89.892	Colobus_angolensis_palliatus
ENSCGRG00000015138	-	100	100.000	ENSCGRG00001013260	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000015138	-	98	49.262	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
ENSCGRG00000015138	-	100	48.320	ENSCVAG00000013971	raver1	81	61.616	Cyprinodon_variegatus
ENSCGRG00000015138	-	100	82.213	ENSDORG00000010106	-	100	81.291	Dipodomys_ordii
ENSCGRG00000015138	-	58	88.832	ENSETEG00000008201	-	74	87.940	Echinops_telfairi
ENSCGRG00000015138	-	67	92.029	ENSEASG00005010544	-	93	89.401	Equus_asinus_asinus
ENSCGRG00000015138	-	100	91.240	ENSECAG00000024966	RAVER1	98	91.240	Equus_caballus
ENSCGRG00000015138	-	98	51.355	ENSELUG00000023287	raver1	91	52.156	Esox_lucius
ENSCGRG00000015138	-	100	90.566	ENSFCAG00000009435	RAVER1	98	90.566	Felis_catus
ENSCGRG00000015138	-	100	90.040	ENSFDAG00000015113	RAVER1	100	90.040	Fukomys_damarensis
ENSCGRG00000015138	-	81	60.825	ENSGMOG00000003649	raver1	81	60.825	Gadus_morhua
ENSCGRG00000015138	-	66	44.890	ENSGALG00000050608	-	52	44.779	Gallus_gallus
ENSCGRG00000015138	-	96	62.051	ENSGAGG00000011748	-	96	76.344	Gopherus_agassizii
ENSCGRG00000015138	-	100	89.218	ENSGGOG00000006015	RAVER1	98	88.679	Gorilla_gorilla
ENSCGRG00000015138	-	74	84.314	ENSHBUG00000021210	raver1	76	84.314	Haplochromis_burtoni
ENSCGRG00000015138	-	100	90.310	ENSHGLG00000015460	RAVER1	100	89.906	Heterocephalus_glaber_female
ENSCGRG00000015138	-	100	90.310	ENSHGLG00100000812	RAVER1	100	89.906	Heterocephalus_glaber_male
ENSCGRG00000015138	-	98	49.932	ENSHCOG00000000449	raver1	89	50.413	Hippocampus_comes
ENSCGRG00000015138	-	98	52.109	ENSIPUG00000013153	raver1	81	60.784	Ictalurus_punctatus
ENSCGRG00000015138	-	100	91.129	ENSSTOG00000003241	RAVER1	100	90.591	Ictidomys_tridecemlineatus
ENSCGRG00000015138	-	100	91.275	ENSJJAG00000018219	-	100	91.141	Jaculus_jaculus
ENSCGRG00000015138	-	97	49.130	ENSKMAG00000017355	raver1	91	48.784	Kryptolebias_marmoratus
ENSCGRG00000015138	-	68	58.185	ENSLBEG00000008268	raver1	68	57.540	Labrus_bergylta
ENSCGRG00000015138	-	90	60.976	ENSLACG00000005809	-	99	61.549	Latimeria_chalumnae
ENSCGRG00000015138	-	96	56.124	ENSLOCG00000007500	raver1	92	54.643	Lepisosteus_oculatus
ENSCGRG00000015138	-	100	88.694	ENSLAFG00000003664	-	100	88.964	Loxodonta_africana
ENSCGRG00000015138	-	100	89.757	ENSMFAG00000037977	RAVER1	98	89.218	Macaca_fascicularis
ENSCGRG00000015138	-	100	90.027	ENSMMUG00000014897	RAVER1	98	89.488	Macaca_mulatta
ENSCGRG00000015138	-	100	90.027	ENSMNEG00000028390	RAVER1	98	89.488	Macaca_nemestrina
ENSCGRG00000015138	-	100	90.162	ENSMLEG00000041959	RAVER1	98	89.623	Mandrillus_leucophaeus
ENSCGRG00000015138	-	74	79.245	ENSMAMG00000012059	raver1	76	79.245	Mastacembelus_armatus
ENSCGRG00000015138	-	74	87.500	ENSMZEG00005019002	raver1	76	87.500	Maylandia_zebra
ENSCGRG00000015138	-	100	97.849	ENSMAUG00000017948	-	100	97.849	Mesocricetus_auratus
ENSCGRG00000015138	-	99	88.259	ENSMICG00000010326	RAVER1	99	88.259	Microcebus_murinus
ENSCGRG00000015138	-	100	97.844	ENSMOCG00000015553	-	100	97.844	Microtus_ochrogaster
ENSCGRG00000015138	-	99	50.535	ENSMMOG00000012093	raver1	75	87.500	Mola_mola
ENSCGRG00000015138	-	97	74.931	ENSMODG00000005584	-	89	74.518	Monodelphis_domestica
ENSCGRG00000015138	-	99	49.125	ENSMALG00000016569	raver1	80	56.974	Monopterus_albus
ENSCGRG00000015138	-	100	95.989	MGP_CAROLIEiJ_G0031860	-	100	95.989	Mus_caroli
ENSCGRG00000015138	-	100	96.390	ENSMUSG00000010205	Raver1	100	96.390	Mus_musculus
ENSCGRG00000015138	-	100	95.878	MGP_PahariEiJ_G0014726	-	100	95.878	Mus_pahari
ENSCGRG00000015138	-	100	96.257	MGP_SPRETEiJ_G0032984	-	100	96.257	Mus_spretus
ENSCGRG00000015138	-	100	89.892	ENSMPUG00000006712	RAVER1	98	89.892	Mustela_putorius_furo
ENSCGRG00000015138	-	100	87.062	ENSMLUG00000012328	RAVER1	100	87.466	Myotis_lucifugus
ENSCGRG00000015138	-	100	92.328	ENSNGAG00000001260	-	100	92.328	Nannospalax_galili
ENSCGRG00000015138	-	78	65.000	ENSNBRG00000010139	raver1	78	58.586	Neolamprologus_brichardi
ENSCGRG00000015138	-	100	89.623	ENSNLEG00000012181	RAVER1	98	89.084	Nomascus_leucogenys
ENSCGRG00000015138	-	90	74.112	ENSMEUG00000003281	-	100	73.077	Notamacropus_eugenii
ENSCGRG00000015138	-	51	84.375	ENSOPRG00000005855	-	51	84.375	Ochotona_princeps
ENSCGRG00000015138	-	100	90.310	ENSODEG00000016260	RAVER1	100	89.906	Octodon_degus
ENSCGRG00000015138	-	78	63.750	ENSONIG00000001559	raver1	99	51.023	Oreochromis_niloticus
ENSCGRG00000015138	-	100	83.019	ENSOCUG00000020918	RAVER1	100	81.806	Oryctolagus_cuniculus
ENSCGRG00000015138	-	70	62.326	ENSORLG00000005458	raver1	67	66.247	Oryzias_latipes
ENSCGRG00000015138	-	70	62.093	ENSORLG00020004392	raver1	67	65.995	Oryzias_latipes_hni
ENSCGRG00000015138	-	70	61.860	ENSORLG00015017222	raver1	67	65.743	Oryzias_latipes_hsok
ENSCGRG00000015138	-	75	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
ENSCGRG00000015138	-	100	89.084	ENSOGAG00000011071	RAVER1	98	88.814	Otolemur_garnettii
ENSCGRG00000015138	-	100	85.984	ENSOARG00000015886	RAVER1	98	85.984	Ovis_aries
ENSCGRG00000015138	-	100	89.488	ENSPPAG00000002611	RAVER1	98	88.949	Pan_paniscus
ENSCGRG00000015138	-	100	90.970	ENSPPRG00000009912	RAVER1	98	90.970	Panthera_pardus
ENSCGRG00000015138	-	100	89.488	ENSPTRG00000010466	RAVER1	98	88.949	Pan_troglodytes
ENSCGRG00000015138	-	100	90.027	ENSPANG00000004122	RAVER1	98	89.488	Papio_anubis
ENSCGRG00000015138	-	100	97.981	ENSPEMG00000016411	-	100	97.981	Peromyscus_maniculatus_bairdii
ENSCGRG00000015138	-	100	76.636	ENSPCIG00000018695	-	99	79.605	Phascolarctos_cinereus
ENSCGRG00000015138	-	100	48.031	ENSPLAG00000020793	raver1	79	56.805	Poecilia_latipinna
ENSCGRG00000015138	-	90	63.592	ENSPMEG00000011220	raver1	55	67.259	Poecilia_mexicana
ENSCGRG00000015138	-	74	90.698	ENSPREG00000006864	raver1	77	90.698	Poecilia_reticulata
ENSCGRG00000015138	-	100	88.814	ENSPPYG00000010514	RAVER1	84	88.410	Pongo_abelii
ENSCGRG00000015138	-	100	89.651	ENSPCOG00000026605	RAVER1	98	89.919	Propithecus_coquereli
ENSCGRG00000015138	-	100	89.218	ENSPVAG00000003689	RAVER1	100	89.353	Pteropus_vampyrus
ENSCGRG00000015138	-	64	84.314	ENSPNYG00000013284	raver1	65	84.314	Pundamilia_nyererei
ENSCGRG00000015138	-	96	52.740	ENSPNAG00000015476	raver1	91	52.192	Pygocentrus_nattereri
ENSCGRG00000015138	-	100	96.257	ENSRNOG00000020710	Raver1	100	96.257	Rattus_norvegicus
ENSCGRG00000015138	-	100	89.353	ENSRBIG00000034702	RAVER1	98	89.488	Rhinopithecus_bieti
ENSCGRG00000015138	-	100	87.736	ENSRROG00000031186	RAVER1	98	87.062	Rhinopithecus_roxellana
ENSCGRG00000015138	-	100	87.062	ENSSBOG00000023423	RAVER1	98	86.388	Saimiri_boliviensis_boliviensis
ENSCGRG00000015138	-	90	75.258	ENSSHAG00000008181	-	90	74.521	Sarcophilus_harrisii
ENSCGRG00000015138	-	82	54.917	ENSSDUG00000021063	raver1	84	55.094	Seriola_dumerili
ENSCGRG00000015138	-	68	58.527	ENSSLDG00000014505	raver1	66	57.708	Seriola_lalandi_dorsalis
ENSCGRG00000015138	-	79	61.905	ENSSPAG00000000688	raver1	82	57.658	Stegastes_partitus
ENSCGRG00000015138	-	100	90.431	ENSSSCG00000013650	-	98	90.701	Sus_scrofa
ENSCGRG00000015138	-	97	50.204	ENSTRUG00000025641	raver1	78	59.000	Takifugu_rubripes
ENSCGRG00000015138	-	100	89.488	ENSTTRG00000009552	RAVER1	100	90.027	Tursiops_truncatus
ENSCGRG00000015138	-	100	91.105	ENSUAMG00000020385	RAVER1	98	91.105	Ursus_americanus
ENSCGRG00000015138	-	100	88.410	ENSVVUG00000028976	RAVER1	98	88.814	Vulpes_vulpes
ENSCGRG00000015138	-	100	55.177	ENSXETG00000011622	raver1	95	55.249	Xenopus_tropicalis
ENSCGRG00000015138	-	99	51.471	ENSXCOG00000016368	raver1	77	60.606	Xiphophorus_couchianus
ENSCGRG00000015138	-	99	51.070	ENSXMAG00000000217	raver1	78	60.606	Xiphophorus_maculatus