EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000015720 (Gene tree)
Gene ID: -
Gene Symbol: Gm382
Alias: LOC211208
Full Name: vigilin
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 3787 bases
Position: chrJH002803.1:68203-71989
Accession: 100768304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	1	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	2	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	3	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	4	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	5	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	6	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	7	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	8	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	9	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	10	11
ENSCGRP00000021667	KH_1	PF00013.29	2.4e-109	11	11

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000021971	-	3747	XM_003514151	ENSCGRP00000021667	1248 (aa)	XP_003514199	UPI00022F6CE9

Gene Model

Click here to download ENSCGRG00000015720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000015720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000015720	Gm382	98	46.968	ENSCGRG00000014444	Hdlbp	97	47.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000015720	Gm382	98	53.281	ENSG00000115677	HDLBP	99	55.906	Homo_sapiens
ENSCGRG00000015720	Gm382	97	45.283	ENSAPOG00000012609	hdlbpa	96	45.410	Acanthochromis_polyacanthus
ENSCGRG00000015720	Gm382	98	47.292	ENSAMEG00000016552	HDLBP	97	47.615	Ailuropoda_melanoleuca
ENSCGRG00000015720	Gm382	94	45.480	ENSACIG00000006015	hdlbpa	93	45.480	Amphilophus_citrinellus
ENSCGRG00000015720	Gm382	97	45.201	ENSAOCG00000000300	hdlbpa	96	45.328	Amphiprion_ocellaris
ENSCGRG00000015720	Gm382	97	45.201	ENSAPEG00000000522	hdlbpa	99	45.753	Amphiprion_percula
ENSCGRG00000015720	Gm382	97	44.951	ENSATEG00000009748	hdlbpa	96	44.951	Anabas_testudineus
ENSCGRG00000015720	Gm382	99	46.683	ENSACAG00000001556	HDLBP	99	46.683	Anolis_carolinensis
ENSCGRG00000015720	Gm382	98	52.948	ENSANAG00000020545	HDLBP	94	52.948	Aotus_nancymaae
ENSCGRG00000015720	Gm382	96	45.012	ENSACLG00000025965	hdlbpa	95	45.058	Astatotilapia_calliptera
ENSCGRG00000015720	Gm382	92	45.830	ENSAMXG00000004221	hdlbpa	98	45.830	Astyanax_mexicanus
ENSCGRG00000015720	Gm382	98	50.303	ENSBTAG00000004315	HDLBP	97	50.303	Bos_taurus
ENSCGRG00000015720	Gm382	98	53.170	ENSCJAG00000006152	HDLBP	94	53.170	Callithrix_jacchus
ENSCGRG00000015720	Gm382	98	47.454	ENSCAFG00000012913	HDLBP	99	48.420	Canis_familiaris
ENSCGRG00000015720	Gm382	98	47.454	ENSCAFG00020025089	HDLBP	97	47.777	Canis_lupus_dingo
ENSCGRG00000015720	Gm382	98	46.645	ENSCHIG00000022364	HDLBP	97	46.645	Capra_hircus
ENSCGRG00000015720	Gm382	98	46.968	ENSTSYG00000002379	HDLBP	97	47.292	Carlito_syrichta
ENSCGRG00000015720	Gm382	96	45.912	ENSCAPG00000008584	HDLBP	97	46.243	Cavia_aperea
ENSCGRG00000015720	Gm382	98	53.007	ENSCPOG00000006297	HDLBP	97	53.007	Cavia_porcellus
ENSCGRG00000015720	Gm382	98	52.836	ENSCCAG00000023361	-	94	52.836	Cebus_capucinus
ENSCGRG00000015720	Gm382	75	43.219	ENSCCAG00000037920	-	99	44.000	Cebus_capucinus
ENSCGRG00000015720	Gm382	98	48.401	ENSCATG00000039363	HDLBP	97	47.454	Cercocebus_atys
ENSCGRG00000015720	Gm382	98	53.229	ENSCLAG00000002365	HDLBP	97	53.229	Chinchilla_lanigera
ENSCGRG00000015720	Gm382	98	47.130	ENSCSAG00000005781	HDLBP	96	47.454	Chlorocebus_sabaeus
ENSCGRG00000015720	Gm382	94	38.371	ENSCHOG00000003882	-	99	38.800	Choloepus_hoffmanni
ENSCGRG00000015720	Gm382	99	45.164	ENSCPBG00000002442	HDLBP	98	45.484	Chrysemys_picta_bellii
ENSCGRG00000015720	Gm382	98	52.556	ENSCANG00000033571	HDLBP	95	52.556	Colobus_angolensis_palliatus
ENSCGRG00000015720	Gm382	72	62.047	ENSCGRG00001010570	4921511C20Rik	99	62.047	Cricetulus_griseus_chok1gshd
ENSCGRG00000015720	Gm382	98	52.948	ENSCGRG00001006086	Hdlbp	97	52.948	Cricetulus_griseus_chok1gshd
ENSCGRG00000015720	Gm382	94	45.592	ENSCSEG00000008853	hdlbpa	94	45.592	Cynoglossus_semilaevis
ENSCGRG00000015720	Gm382	98	44.507	ENSCVAG00000017892	hdlbpa	97	44.507	Cyprinodon_variegatus
ENSCGRG00000015720	Gm382	93	45.161	ENSDARG00000009830	hdlbpa	93	44.752	Danio_rerio
ENSCGRG00000015720	Gm382	98	45.645	ENSDNOG00000006753	HDLBP	97	45.968	Dasypus_novemcinctus
ENSCGRG00000015720	Gm382	88	53.659	ENSETEG00000005416	-	69	53.659	Echinops_telfairi
ENSCGRG00000015720	Gm382	98	47.211	ENSEASG00005008249	HDLBP	97	47.534	Equus_asinus_asinus
ENSCGRG00000015720	Gm382	98	47.211	ENSECAG00000012829	HDLBP	97	47.534	Equus_caballus
ENSCGRG00000015720	Gm382	99	48.282	ENSECAG00000030885	-	99	48.282	Equus_caballus
ENSCGRG00000015720	Gm382	99	56.040	ENSECAG00000028723	-	99	56.040	Equus_caballus
ENSCGRG00000015720	Gm382	88	42.509	ENSEEUG00000014648	HDLBP	99	42.509	Erinaceus_europaeus
ENSCGRG00000015720	Gm382	96	47.939	ENSELUG00000010700	hdlbpa	95	47.939	Esox_lucius
ENSCGRG00000015720	Gm382	98	47.292	ENSFCAG00000010455	HDLBP	97	47.615	Felis_catus
ENSCGRG00000015720	Gm382	99	46.890	ENSFALG00000003437	HDLBP	99	47.082	Ficedula_albicollis
ENSCGRG00000015720	Gm382	98	53.229	ENSFDAG00000000456	HDLBP	97	53.229	Fukomys_damarensis
ENSCGRG00000015720	Gm382	96	44.683	ENSFHEG00000004848	hdlbpa	95	44.728	Fundulus_heteroclitus
ENSCGRG00000015720	Gm382	97	42.938	ENSGMOG00000009932	hdlbpa	96	42.938	Gadus_morhua
ENSCGRG00000015720	Gm382	99	47.082	ENSGALG00000005823	HDLBP	99	47.162	Gallus_gallus
ENSCGRG00000015720	Gm382	98	37.676	ENSGAFG00000016766	hdlbpa	97	37.676	Gambusia_affinis
ENSCGRG00000015720	Gm382	97	44.463	ENSGACG00000004648	hdlbpa	96	44.463	Gasterosteus_aculeatus
ENSCGRG00000015720	Gm382	99	46.922	ENSGAGG00000004256	HDLBP	99	47.242	Gopherus_agassizii
ENSCGRG00000015720	Gm382	98	53.281	ENSGGOG00000004392	HDLBP	94	53.281	Gorilla_gorilla
ENSCGRG00000015720	Gm382	96	44.930	ENSHBUG00000001136	hdlbpa	95	44.975	Haplochromis_burtoni
ENSCGRG00000015720	Gm382	98	52.561	ENSHGLG00000004910	HDLBP	97	52.561	Heterocephalus_glaber_female
ENSCGRG00000015720	Gm382	98	52.561	ENSHGLG00100013326	HDLBP	97	52.561	Heterocephalus_glaber_male
ENSCGRG00000015720	Gm382	96	44.963	ENSHCOG00000014837	hdlbpa	95	44.963	Hippocampus_comes
ENSCGRG00000015720	Gm382	99	44.106	ENSIPUG00000013088	hdlbp	97	44.106	Ictalurus_punctatus
ENSCGRG00000015720	Gm382	58	47.257	ENSIPUG00000013177	-	84	47.257	Ictalurus_punctatus
ENSCGRG00000015720	Gm382	98	46.154	ENSSTOG00000013331	HDLBP	97	46.602	Ictidomys_tridecemlineatus
ENSCGRG00000015720	Gm382	99	51.694	ENSJJAG00000013712	-	99	51.694	Jaculus_jaculus
ENSCGRG00000015720	Gm382	98	53.504	ENSJJAG00000003596	Hdlbp	97	53.504	Jaculus_jaculus
ENSCGRG00000015720	Gm382	98	43.735	ENSKMAG00000007571	hdlbpa	97	44.023	Kryptolebias_marmoratus
ENSCGRG00000015720	Gm382	97	44.158	ENSLBEG00000027461	hdlbpa	96	44.400	Labrus_bergylta
ENSCGRG00000015720	Gm382	94	46.199	ENSLACG00000003592	HDLBP	93	46.284	Latimeria_chalumnae
ENSCGRG00000015720	Gm382	99	43.735	ENSLOCG00000006278	hdlbpa	98	43.735	Lepisosteus_oculatus
ENSCGRG00000015720	Gm382	98	47.130	ENSLAFG00000014826	HDLBP	97	47.454	Loxodonta_africana
ENSCGRG00000015720	Gm382	98	52.203	ENSMFAG00000033641	HDLBP	97	52.203	Macaca_fascicularis
ENSCGRG00000015720	Gm382	98	53.281	ENSMMUG00000004730	HDLBP	95	53.281	Macaca_mulatta
ENSCGRG00000015720	Gm382	98	48.401	ENSMNEG00000024260	HDLBP	97	47.454	Macaca_nemestrina
ENSCGRG00000015720	Gm382	98	48.295	ENSMLEG00000042734	HDLBP	97	47.454	Mandrillus_leucophaeus
ENSCGRG00000015720	Gm382	99	44.249	ENSMAMG00000008611	hdlbpa	98	44.171	Mastacembelus_armatus
ENSCGRG00000015720	Gm382	96	45.012	ENSMZEG00005009513	hdlbpa	95	45.058	Maylandia_zebra
ENSCGRG00000015720	Gm382	99	45.324	ENSMGAG00000003686	HDLBP	99	48.670	Meleagris_gallopavo
ENSCGRG00000015720	Gm382	98	53.170	ENSMAUG00000017743	Hdlbp	97	53.170	Mesocricetus_auratus
ENSCGRG00000015720	Gm382	98	52.058	ENSMICG00000004569	HDLBP	94	52.058	Microcebus_murinus
ENSCGRG00000015720	Gm382	98	53.170	ENSMOCG00000006679	Hdlbp	97	53.170	Microtus_ochrogaster
ENSCGRG00000015720	Gm382	96	41.909	ENSMMOG00000006880	hdlbpa	96	41.909	Mola_mola
ENSCGRG00000015720	Gm382	99	46.825	ENSMODG00000016033	HDLBP	99	46.825	Monodelphis_domestica
ENSCGRG00000015720	Gm382	94	45.760	ENSMALG00000015095	hdlbpa	93	45.760	Monopterus_albus
ENSCGRG00000015720	Gm382	98	53.281	MGP_CAROLIEiJ_G0014456	Hdlbp	97	53.281	Mus_caroli
ENSCGRG00000015720	Gm382	100	74.800	MGP_CAROLIEiJ_G0033373	Gm382	100	74.800	Mus_caroli
ENSCGRG00000015720	Gm382	69	62.473	MGP_CAROLIEiJ_G0033374	4921511C20Rik	99	62.473	Mus_caroli
ENSCGRG00000015720	Gm382	69	62.047	ENSMUSG00000049815	4921511C20Rik	99	62.047	Mus_musculus
ENSCGRG00000015720	Gm382	100	74.720	ENSMUSG00000062791	Gm382	100	74.720	Mus_musculus
ENSCGRG00000015720	Gm382	98	53.393	ENSMUSG00000034088	Hdlbp	97	53.393	Mus_musculus
ENSCGRG00000015720	Gm382	72	62.473	MGP_PahariEiJ_G0031914	4921511C20Rik	99	62.473	Mus_pahari
ENSCGRG00000015720	Gm382	100	75.440	MGP_PahariEiJ_G0031913	Gm382	100	75.440	Mus_pahari
ENSCGRG00000015720	Gm382	98	53.170	MGP_PahariEiJ_G0027692	Hdlbp	97	53.170	Mus_pahari
ENSCGRG00000015720	Gm382	98	53.281	MGP_SPRETEiJ_G0015260	Hdlbp	97	53.281	Mus_spretus
ENSCGRG00000015720	Gm382	69	62.047	MGP_SPRETEiJ_G0034539	4921511C20Rik	99	62.047	Mus_spretus
ENSCGRG00000015720	Gm382	100	74.640	MGP_SPRETEiJ_G0034538	Gm382	100	74.640	Mus_spretus
ENSCGRG00000015720	Gm382	98	46.968	ENSMPUG00000000163	HDLBP	97	47.292	Mustela_putorius_furo
ENSCGRG00000015720	Gm382	98	47.087	ENSMLUG00000005628	HDLBP	97	47.411	Myotis_lucifugus
ENSCGRG00000015720	Gm382	98	53.281	ENSNGAG00000014873	Hdlbp	97	53.281	Nannospalax_galili
ENSCGRG00000015720	Gm382	96	44.930	ENSNBRG00000000051	hdlbpa	96	44.975	Neolamprologus_brichardi
ENSCGRG00000015720	Gm382	98	46.968	ENSNLEG00000013818	HDLBP	97	47.292	Nomascus_leucogenys
ENSCGRG00000015720	Gm382	92	42.679	ENSNLEG00000031018	-	93	42.679	Nomascus_leucogenys
ENSCGRG00000015720	Gm382	99	57.679	ENSMEUG00000008427	HDLBP	87	57.679	Notamacropus_eugenii
ENSCGRG00000015720	Gm382	94	47.892	ENSOPRG00000011965	-	93	47.892	Ochotona_princeps
ENSCGRG00000015720	Gm382	98	53.452	ENSODEG00000012313	-	97	53.452	Octodon_degus
ENSCGRG00000015720	Gm382	98	45.550	ENSODEG00000017391	-	97	45.793	Octodon_degus
ENSCGRG00000015720	Gm382	97	44.625	ENSONIG00000019272	hdlbpa	96	44.670	Oreochromis_niloticus
ENSCGRG00000015720	Gm382	98	47.492	ENSOANG00000011759	-	97	47.816	Ornithorhynchus_anatinus
ENSCGRG00000015720	Gm382	98	46.807	ENSOCUG00000012667	HDLBP	97	46.807	Oryctolagus_cuniculus
ENSCGRG00000015720	Gm382	97	44.220	ENSORLG00000002226	hdlbpa	96	44.462	Oryzias_latipes
ENSCGRG00000015720	Gm382	97	44.301	ENSORLG00020007905	hdlbpa	96	44.543	Oryzias_latipes_hni
ENSCGRG00000015720	Gm382	97	44.397	ENSORLG00015004126	hdlbpa	96	44.720	Oryzias_latipes_hsok
ENSCGRG00000015720	Gm382	97	42.985	ENSOMEG00000000247	hdlbpa	96	43.147	Oryzias_melastigma
ENSCGRG00000015720	Gm382	98	46.483	ENSOGAG00000000738	HDLBP	97	46.807	Otolemur_garnettii
ENSCGRG00000015720	Gm382	98	45.455	ENSOARG00000017870	HDLBP	97	45.455	Ovis_aries
ENSCGRG00000015720	Gm382	98	53.111	ENSPPAG00000023318	HDLBP	94	53.111	Pan_paniscus
ENSCGRG00000015720	Gm382	98	47.373	ENSPPRG00000010215	HDLBP	97	47.696	Panthera_pardus
ENSCGRG00000015720	Gm382	98	44.209	ENSPTIG00000009328	HDLBP	97	44.209	Panthera_tigris_altaica
ENSCGRG00000015720	Gm382	98	53.281	ENSPTRG00000013121	HDLBP	94	53.281	Pan_troglodytes
ENSCGRG00000015720	Gm382	98	46.968	ENSPANG00000011832	HDLBP	97	47.292	Papio_anubis
ENSCGRG00000015720	Gm382	98	44.094	ENSPKIG00000002392	hdlbpa	97	44.337	Paramormyrops_kingsleyae
ENSCGRG00000015720	Gm382	94	46.992	ENSPSIG00000010068	HDLBP	99	47.341	Pelodiscus_sinensis
ENSCGRG00000015720	Gm382	94	49.837	ENSPMGG00000002102	hdlbpa	94	49.837	Periophthalmus_magnuspinnatus
ENSCGRG00000015720	Gm382	98	53.393	ENSPEMG00000017704	Hdlbp	97	53.393	Peromyscus_maniculatus_bairdii
ENSCGRG00000015720	Gm382	98	47.101	ENSPCIG00000015375	HDLBP	92	47.424	Phascolarctos_cinereus
ENSCGRG00000015720	Gm382	98	44.023	ENSPFOG00000000236	hdlbpa	97	44.184	Poecilia_formosa
ENSCGRG00000015720	Gm382	93	45.120	ENSPLAG00000006033	hdlbpa	97	45.338	Poecilia_latipinna
ENSCGRG00000015720	Gm382	98	43.492	ENSPMEG00000006627	hdlbpa	97	43.780	Poecilia_mexicana
ENSCGRG00000015720	Gm382	98	34.044	ENSPREG00000014450	hdlbpa	98	34.311	Poecilia_reticulata
ENSCGRG00000015720	Gm382	98	46.968	ENSPPYG00000013351	HDLBP	97	47.292	Pongo_abelii
ENSCGRG00000015720	Gm382	98	48.148	ENSPCAG00000011136	HDLBP	76	48.148	Procavia_capensis
ENSCGRG00000015720	Gm382	98	51.947	ENSPCOG00000021622	HDLBP	97	51.947	Propithecus_coquereli
ENSCGRG00000015720	Gm382	98	46.359	ENSPVAG00000000555	HDLBP	97	46.683	Pteropus_vampyrus
ENSCGRG00000015720	Gm382	96	44.930	ENSPNYG00000020753	hdlbpa	95	44.975	Pundamilia_nyererei
ENSCGRG00000015720	Gm382	96	44.847	ENSPNAG00000029610	hdlbpa	96	44.847	Pygocentrus_nattereri
ENSCGRG00000015720	Gm382	70	59.633	ENSRNOG00000028847	AABR07040251.1	99	59.633	Rattus_norvegicus
ENSCGRG00000015720	Gm382	72	59.055	ENSRNOG00000042823	RGD1561230	94	59.055	Rattus_norvegicus
ENSCGRG00000015720	Gm382	100	76.640	ENSRNOG00000031294	RGD1563104	100	76.640	Rattus_norvegicus
ENSCGRG00000015720	Gm382	98	46.968	ENSRNOG00000031479	Hdlbp	97	47.292	Rattus_norvegicus
ENSCGRG00000015720	Gm382	98	52.550	ENSRBIG00000041381	HDLBP	95	52.550	Rhinopithecus_bieti
ENSCGRG00000015720	Gm382	98	52.550	ENSRROG00000034263	HDLBP	96	52.550	Rhinopithecus_roxellana
ENSCGRG00000015720	Gm382	98	46.807	ENSSBOG00000029714	-	95	47.130	Saimiri_boliviensis_boliviensis
ENSCGRG00000015720	Gm382	91	43.570	ENSSBOG00000033067	-	95	43.717	Saimiri_boliviensis_boliviensis
ENSCGRG00000015720	Gm382	99	47.402	ENSSHAG00000012422	HDLBP	99	47.722	Sarcophilus_harrisii
ENSCGRG00000015720	Gm382	94	44.631	ENSSFOG00015018627	hdlbp	94	44.883	Scleropages_formosus
ENSCGRG00000015720	Gm382	97	45.033	ENSSMAG00000002382	hdlbpa	96	45.403	Scophthalmus_maximus
ENSCGRG00000015720	Gm382	94	45.607	ENSSDUG00000022258	hdlbpa	93	45.607	Seriola_dumerili
ENSCGRG00000015720	Gm382	94	45.523	ENSSLDG00000004437	hdlbpa	93	45.523	Seriola_lalandi_dorsalis
ENSCGRG00000015720	Gm382	83	46.735	ENSSARG00000012639	HDLBP	78	47.143	Sorex_araneus
ENSCGRG00000015720	Gm382	99	47.125	ENSSPUG00000009182	HDLBP	99	47.125	Sphenodon_punctatus
ENSCGRG00000015720	Gm382	97	45.328	ENSSPAG00000009145	hdlbpa	95	45.455	Stegastes_partitus
ENSCGRG00000015720	Gm382	98	46.483	ENSSSCG00000016379	HDLBP	99	46.968	Sus_scrofa
ENSCGRG00000015720	Gm382	94	47.254	ENSTGUG00000006189	HDLBP	99	47.538	Taeniopygia_guttata
ENSCGRG00000015720	Gm382	97	44.572	ENSTRUG00000012148	hdlbpa	96	44.819	Takifugu_rubripes
ENSCGRG00000015720	Gm382	95	44.083	ENSTNIG00000004185	hdlbpa	95	44.333	Tetraodon_nigroviridis
ENSCGRG00000015720	Gm382	89	57.473	ENSTBEG00000001860	HDLBP	88	57.473	Tupaia_belangeri
ENSCGRG00000015720	Gm382	98	49.109	ENSTTRG00000015251	HDLBP	74	49.109	Tursiops_truncatus
ENSCGRG00000015720	Gm382	98	47.292	ENSUAMG00000018383	HDLBP	97	48.233	Ursus_americanus
ENSCGRG00000015720	Gm382	98	47.292	ENSUMAG00000010539	HDLBP	97	47.615	Ursus_maritimus
ENSCGRG00000015720	Gm382	86	54.911	ENSVPAG00000003112	HDLBP	93	54.911	Vicugna_pacos
ENSCGRG00000015720	Gm382	94	48.061	ENSVVUG00000022797	HDLBP	97	48.322	Vulpes_vulpes
ENSCGRG00000015720	Gm382	94	45.714	ENSXETG00000012164	hdlbp	92	45.714	Xenopus_tropicalis
ENSCGRG00000015720	Gm382	97	43.602	ENSXCOG00000005943	hdlbpa	97	43.847	Xiphophorus_couchianus
ENSCGRG00000015720	Gm382	97	43.567	ENSXMAG00000003787	hdlbpa	96	43.857	Xiphophorus_maculatus